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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:3250498..3254985+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044961 ID=XLOC_044961|Name=XLOC_044961|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4488bp|location=Sequence derived from alignment at sc0000002_pilon:3250498..3254985+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCGTTTCAGCCGATGAAAGAAATGACGCTGCCAACGATGCATAATTT
GAACACGTCAGAATCTAACATTGTTGTTTGGAGAAAATGTACGCCTTTCT
GTGATAAAACTGTCGAATGTCCTGAACATCATGAACTCTTACAAGCAATT
GTAAATTGTACAGACCAATTAGGTCACTTATCGAACTTAGATGGCTTGAA
AGCCTGTATAGAGAAATATCAGAGTATGGGTTGGGATCGGAATGATACCA
TCCCAGACCCTGTTGCTTCGAACAGGTTACCGTTGATCCACTGGGCAGCT
TCTCTCGGTAAATGTAATGCTCTTGAGTGGATGCTAAGCAACGGATTCGA
TTCCACCGTTACGATAGGAAGTTTAACAGAAAACGCTTTGCACAGAACTA
TATTATACCTTTATAAATCAAGGCCTAAATTTACAACGAAAGAACTGAaa
ccgaaattccgtaaaataTGTAATTTATTATCAAACTTAATGTATCATTC
GGACTTAGGGAATGGAACTCCGTTACATTTAGCCGCTAGTTTGTTATGTA
GCTCAGAGACCAGGCTAGTTTTCTTTCAAACAGCAATTGAAGTTATGGCC
GCTCAGGCTAAGGAAATGAACGATTCGGATAGAATGGCGACTTTAGACGC
TAAAAATAACGAAGGAAATACTTGTTTGCATATACTTGCTGGTGctaatg
agaaaatcaaagTTGATCACGTTTGTACCGCCATTTCCGCCCTACTTCAA
TCGGGCGCTGATAAGACGATGAGAAATGCAAAGGATCAAACACCCTTGGA
TATTGCCATTCAAAAAGGTTACAATAACGTCATCGATGAACTGGTCAAGG
TATTGTTTGATAACTTTGAAATTTACTTTATCTGACATGTTCAACTCTTC
GAATTGGCCGAATCCTGGACATAAATTGGTAACCTGAAACAATTAAAGTA
CTCCCCCTTATTGCATTATGGAATATACCTAAAAGAATTCTCCaatcttt
tctaaaaattattaagtccaaaattttacGTTGACTTTTACTATGTTCTg
attttcttttctgtttttcaGATAGTGAACCCATCAACGTCCTTGGTCAA
AGAATCGCCTTCTTCGTCTACATCTCATCACGATTCACGCTCCCTCATGA
CCATGGTCGATATGCGAAGAGGTAGCCCGGTCTCCAACTCCATGATCAAT
CTCAATCGCTCGGCATACGGTTACACGGAACGCAGGCGTTCACGCAGTCG
TTCGCCCATTCGGTCACCGCGCTCTGAACGTGAACGCGAATCACCGCCAA
TGGCCCACTCGAAGTATGAAGACTCAGCGAGGAACGGATTTCTCATTAAA
CAAGAGGACGAAAACGAAGTAGGTTTCCTTAATTTTAAAGGCAGAAACCT
TAGCGATTTTTTAGTTTTGGCTGCGAAAGTTTCTAACAAGCTaagtaaaa
attctttttggacctacctaaggtagtcctttaaattaacccttgtccgt
tcgttcgtccgttcgttcgttcgtctgttgccagcttttctcgggatcgg
ctcattagttttttctaattttttgcacaatgatgcaaaatggcaatgcc
caaaatgtgacggagcccgattttcgaaaaaaaaaatttccggccgaaaa
tggcggaaatatgccggaaaaactggtttttcggcattttctcgagattt
catcattagttttttctgattttttgctcaaagatgcgtattaacaatgc
ccaaaacatggtctagtccgatttttgagaaaaaattttttccggccgaa
aatgccggaaatatgccggaaatcgccgtttttctggattttcattggac
ttttccatataattggttgttttttcattcaaaaagattatcaatagcaa
ttcccaccatcaagcatgtttcaattttcaataaaattgatttttgaagc
cggaactttctaaaaatcgccggaacagccgattttcgccggaaaaacgg
tatttcttgaatttcttgagctgtactttatattttttcatgaaattttg
cacattgatgcaaaatgtcaatgcctaaattgtgacggagcctgattttc
gaaaaaattcatttccggccgaaaatgccggaaatatgccggaaaaactg
gttttttggcattttctcgagatttcatcattagttttttctgatttttt
gctcaaatatgcgtattaacaatgcccaaaacatggccgagtccgatttt
taagaaaaatttttttccggcggaaaatgcctgaaatatgccggaaatcg
ccgtttttgcagattttcatcggactttttccttataattggttgttttt
tcattcaaaaacattattaatagcaatgtccaccatcaagcatgtttcaa
ttttcaataaaattgatttttgaagccggagctatttaaaaatcgccgga
acaacctattttgccggaaagacagtatttcttgaatttctcgagctgta
ctttatatttttttatgaaattttgcacactgatgcaatatgacaatacc
taaaatgtgacagagcccgattttagaaaaacatttttttctggccgaaa
atgccggaaatatgccggaaaagccggttttttacattttctcgaatttt
catcaaaagttttttctgattttttgcagaaaaatgcGTATTCCCAATGC
ttaaaacatggctgagtttttttgatttttgaaaaaaatttttttttggt
tgaaaatgccggaaatcgccgtttttgcagattttcattagatttttttc
ttgtatttcactcaaaaacattattgataacaacatcaagcatgattcaa
ttgtcaataaaactgatttttgcgaccagaactttctatttatttttccc
ctacaacccttccctctcccccatcaacaatcaatgatgaatttattgcg
ttatgcattttcgctaaacgatatactttttgactgatttttttctcctc
gcatttctatccaactttcatcatcaggtaggtccattcagcatctagct
tgtttcgTTTGATTTCGCattacagtggaacctctaattagcggacacca
tcggggaaaggggttagtgtccgctaattagaagtgtccgccttttagaa
acttttgatctcggagctccaattttgaaattaagccatcccagggtgtc
gaaaatacaaaattggggtctaaagtacttatctgcagacactaggccct
agaagaacaagagaaaggttattaaaacgcaacaatttagtttttaacaa
ataaaagaaaatcagtgatttacgatttctttggcccacctaaattcgtt
gaatgggtcaagagaaaactggaaatttatagaaataatttgaatgataa
gactaataagtgctcgaaataaaaatatctaaaattttttttttcgattt
tggacgttTGTGACcagtttgatattcaatgtccgctaattggagagcta
aataggggttttggtcatttcgtgcgaaaaaatttgtccgctaatcagag
ggtccgctaattgagtgtccgccttttagaaacttttttatgaggatttg
actaggaaacggccgagGAAAATataattgtccgctaatcagaggtgtcc
ttcttttagagtgtccgttaattagagatTTTACTGTATAACACTGATAT
GAACAATGcgaaaaaagttacaaatggATAAACGATTGGGACCCTTGTTT
ACATGATCTGGAAATAGTGGTACAGTGGCATTAAAATAGTTTCTTCTCCA
TTTAGGTAGATAGCAGTTTGCAACCGACGAGTCCTGCTTCAGATGCCATG
TCTTCTATGTCCAACATCGATGGTGAGTAAAGACGGAGAAATGGAGCGTT
TGCCTGTTTTACCGTTTATAAGATAACtaaaggtttttgaaaataCTGCT
CAGCTGCTCATGCCTGGTTAGGTCCCTTGATCTTCACGATTGTAGCTTTC
AAGGCAGGTCTGACCATGAACAGTCATCAGTCATCATTAAATTGTATCTT
TTACATTAGATTGAAAGTTACGTTTTTCTGCTCCAGCGGGAGTAAGTAGA
GCCTTGCAGTTTCCATAACCTTGATAATTAAATTTTACCCtttttttCAG
TCAACTCACCACTACTGTCACACTTGGCGGAGGCTGGTCTTTTGAGTGAA
GTTTCTGATCTCCTGTCACGAGCCAAAGCACGCGATGAAAGCCAGTTGAA
ACGTTACCAACAACAAGCTAAAGACCTTGATACACAAATCATgtacaaac
aaaaagaaattgaacgTATAAAATCCGAAGTAGAAACTTTGCGTAAGAAA
CGCAATCGTTGCGATGACGAGACGGCGAAACTTAAGAAAAAACTCGCTTC
TTGCTCGAACGCGATTCGCGAACTTCCTTACGGACAAAACTCGAACACGG
GGGAAGCGCAATCAGTTGCTCACTCCCCTGCTACGTAA Coding sequence (CDS) from alignment at sc0000002_pilon:3250498..3254985+ >XLOC_044961 ID=XLOC_044961|Name=XLOC_044961|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3102bp|location=Sequence derived from alignment at sc0000002_pilon:3250498..3254985+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCGTTTCAGCCGATGAAAGAAATGACGCTGCCAACGATGCATAATTT
GAACACGTCAGAATCTAACATTGTTGTTTGGAGAAAATGTACGCCTTTCT
GTGATAAAACTGTCGAATGTCCTGAACATCATGAACTCTTACAAGCAATT
GTAAATTGTACAGACCAATTAGGTCACTTATCGAACTTAGATGGCTTGAA
AGCCTGTATAGAGAAATATCAGAGTATGGGTTGGGATCGGAATGATACCA
TCCCAGACCCTGTTGCTTCGAACAGGTTACCGTTGATCCACTGGGCAGCT
TCTCTCGGTAAATGTAATGCTCTTGAGTGGATGCTAAGCAACGGATTCGA
TTCCACCGTTACGATAGGAAGTTTAACAGAAAACGCTTTGCACAGAACTA
TATTATACCTTTATAAATCAAGGCCTAAATTTACAACGAAAGAACTGAaa
ccgaaattccgtaaaataTGTAATTTATTATCAAACTTAATGTATCATTC
GGACTTAGGGAATGGAACTCCGTTACATTTAGCCGCTAGTTTGTTATGTA
GCTCAGAGACCAGGCTAGTTTTCTTTCAAACAGCAATTGAAGTTATGGCC
GCTCAGGCTAAGGAAATGAACGATTCGGATAGAATGGCGACTTTAGACGC
TAAAAATAACGAAGGAAATACTTGTTTGCATATACTTGCTGGTGctaatg
agaaaatcaaagTTGATCACGTTTGTACCGCCATTTCCGCCCTACTTCAA
TCGGGCGCTGATAAGACGATGAGAAATGCAAAGGATCAAACACCCTTGGA
TATTGCCATTCAAAAAGGTTACAATAACGTCATCGATGAACTGGTCAAGT
TTTCGTTTCAGCCGATGAAAGAAATGACGCTGCCAACGATGCATAATTTG
AACACGTCAGAATCTAACATTGTTGTTTGGAGAAAATGTACGCCTTTCTG
TGATAAAACTGTCGAATGTCCTGAACATCATGAACTCTTACAAGCAATTG
TAAATTGTACAGACCAATTAGGTCACTTATCGAACTTAGATGGCTTGAAA
GCCTGTATAGAGAAATATCAGAGTATGGGTTGGGATCGGAATGATACCAT
CCCAGACCCTGTTGCTTCGAACAGGTTACCGTTGATCCACTGGGCAGCTT
CTCTCGGTAAATGTAATGCTCTTGAGTGGATGCTAAGCAACGGATTCGAT
TCCACCGTTACGATAGGAAGTTTAACAGAAAACGCTTTGCACAGAACTAT
ATTATACCTTTATAAATCAAGGCCTAAATTTACAACGAAAGAACTGAaac
cgaaattccgtaaaataTGTAATTTATTATCAAACTTAATGTATCATTCG
GACTTAGGGAATGGAACTCCGTTACATTTAGCCGCTAGTTTGTTATGTAG
CTCAGAGACCAGGCTAGTTTTCTTTCAAACAGCAATTGAAGTTATGGCCG
CTCAGGCTAAGGAAATGAACGATTCGGATAGAATGGCGACTTTAGACGCT
AAAAATAACGAAGGAAATACTTGTTTGCATATACTTGCTGGTGctaatga
gaaaatcaaagTTGATCACGTTTGTACCGCCATTTCCGCCCTACTTCAAT
CGGGCGCTGATAAGACGATGAGAAATGCAAAGGATCAAACACCCTTGGAT
ATTGCCATTCAAAAAGGTTACAATAACGTCATCGATGAACTGGTCAAGAT
AGTGAACCCATCAACGTCCTTGGTCAAAGAATCGCCTTCTTCGTCTACAT
CTCATCACGATTCACGCTCCCTCATGACCATGGTCGATATGCGAAGAGGT
AGCCCGGTCTCCAACTCCATGATCAATCTCAATCGCTCGGCATACGGTTA
CACGGAACGCAGGCGTTCACGCAGTCGTTCGCCCATTCGGTCACCGCGCT
CTGAACGTGAACGCGAATCACCGCCAATGGCCCACTCGAAGTATGAAGAC
TCAGCGAGGAACGGATTTCTCATTAAACAAGAGGACGAAAACGAAATAGT
GAACCCATCAACGTCCTTGGTCAAAGAATCGCCTTCTTCGTCTACATCTC
ATCACGATTCACGCTCCCTCATGACCATGGTCGATATGCGAAGAGGTAGC
CCGGTCTCCAACTCCATGATCAATCTCAATCGCTCGGCATACGGTTACAC
GGAACGCAGGCGTTCACGCAGTCGTTCGCCCATTCGGTCACCGCGCTCTG
AACGTGAACGCGAATCACCGCCAATGGCCCACTCGAAGTATGAAGACTCA
GCGAGGAACGGATTTCTCATTAAACAAGAGGACGAAAACGAAGTAGATAG
CAGTTTGCAACCGACGAGTCCTGCTTCAGATGCCATGTCTTCTATGTCCA
ACATCGATGGTAGATAGCAGTTTGCAACCGACGAGTCCTGCTTCAGATGC
CATGTCTTCTATGTCCAACATCGATGTCAACTCACCACTACTGTCACACT
TGGCGGAGGCTGGTCTTTTGAGTGAAGTTTCTGATCTCCTGTCACGAGCC
AAAGCACGCGATGAAAGCCAGTTGAAACGTTACCAACAACAAGCTAAAGA
CCTTGATACACAAATCATgtacaaacaaaaagaaattgaacgTATAAAAT
CCGAAGTAGAAACTTTGCGTAAGAAACGCAATCGTTGCGATGACGAGACG
GCGAAACTTAAGAAAAAACTCGCTTCTTGCTCGAACGCGATTCGCGAACT
TCCTTACGGACAAAACTCGAACACGGGGGAAGCGCAATCAGTTGCTCACT
CCCCTGCTACGTAATCAACTCACCACTACTGTCACACTTGGCGGAGGCTG
GTCTTTTGAGTGAAGTTTCTGATCTCCTGTCACGAGCCAAAGCACGCGAT
GAAAGCCAGTTGAAACGTTACCAACAACAAGCTAAAGACCTTGATACACA
AATCATgtacaaacaaaaagaaattgaacgTATAAAATCCGAAGTAGAAA
CTTTGCGTAAGAAACGCAATCGTTGCGATGACGAGACGGCGAAACTTAAG
AAAAAACTCGCTTCTTGCTCGAACGCGATTCGCGAACTTCCTTACGGACA
AAACTCGAACACGGGGGAAGCGCAATCAGTTGCTCACTCCCCTGCTACGT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:3250498..3254985 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1216-1551:4153 |
| Aaloc | 1147-1212:3806 |
| Aaloc | 850-1146:1072 |
| Aaloc | 1-849:1 |
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