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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000235_pilon:190096..194819- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044948 ID=XLOC_044948|Name=XLOC_044948|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4724bp|location=Sequence derived from alignment at sc0000235_pilon:190096..194819- (Clytia hemisphaerica_ch_hm2_pilon)
GGAATGCAATACGTTGCTGATCTAAATGTAAGTAAATTCTTTAGAAGTAT
CTAAGCATTATTTCTAGAGCATTGGTCGTTCGAATTTTCTATCCGTCCTC
TTTATCTGCTTCTCATCTTCATCCAACAGAAAAATTAATCGGTTGATTCG
TTATTTTAACATCCATAAAACGTGCAGAATTTTCATAAAACGTCAGATGA
ACGTTGAAAGTGACCCCTCCTAACTAAGCTGGCTTACGTTCCTGATAACC
CCTGTGAAACTTCATCCCACTGAGGGGATGAAAGTTTCTATCGAAATCTC
AATGAACAAAGAAATTCTATTGTTCCCAGCCCAAAAATCCAAATAGGGAT
GGTTTTGGAGTTCAAATTTTTGTTCCATTCATATTCAAGTGGGGAAGTCA
ATTTTTTAGTGGGGCTGTAATTGTGGGGTATTTTCTCCACCGGGGACGAA
ATTTTCGGTTAATTTTCAATCGGAGTAGGGATTGTACCGGGTCTGTGATC
TGTTCTTTGAACATTATTCGAACGTCATATGAACATTATGTAAACGTTAG
ATGGACCTTATGTAGACCTTTTTTGTTAGCTAAGTAATCATTTATTTCAA
CAACTTTTACTTCAGATTGTACACCGTGATTTAGCTTGCAGAAACATTTT
AGTTGGTTACAACCGTGTGTGTAAAGTTGCTGATTTCGGATTGGCCAAAA
AAGTCGGAGATAATGGAATATATCAACGCACAGAACAGGTACTCTTTGTT
TGTACTGAAGCGATTCTATTGGTTATATTTGTAATTAGCTATTTGTCCTA
TGGGGATCCGTGCTCTAGGATTTATCATTATCATTTTGATCGCTTTAATA
CGTGGACAGCTAAAAGTCAATCTCAATAAACCATTTCATAAATTATGTCA
CGAAAATCACTTGCCTCGTATTCAAACAGTTACCATTGTGATTATGTCCC
TTGAGACATTGAATGATTTTTTATGAATTGAAAGTAGTTTAAATAAAAAC
CGCTGGGAGTTAACCACTATGGCAAGTAGGAGTTGACTACTCAATTCTTC
GCTACTTCGATAAAATGGGTGCCGGATATGTGCGAGCCACAACATCTTTC
AAAGGAGTACAGCAAGCGATAAATTAACAATCGATTCTCTGAGAGGATCC
CAAAATTACGAAATATCAAAAACCGACTCCCTCAAAGGGTCATAAAATCT
GATAATTTTGAGCTAAAAATTGGAATTAAATAGTCTCTCAAAGGGTCGTG
AAAACGTCTCAATTCAGTCTCTCAACGGGTCGATTTTCGAACTTTCCCCG
AATCCTTAGACAAAGAGATTTTATAACTTATCAATGAAAGAATCCTTCTT
ATGGGACAGAGAAACTAAAAATTGATCACTTTTTTATCATTTCAGGCAAA
ACTACCTGTCAAATGGCTACCCCCTGAATCCATCAAATACGGACGATCAT
CTCTCCAAAGCGATATGTAAGCAAATATTTAATGTTCATTATTCAGAAGA
CCAAACTCGAACCCAGTCTCTTAGTTCTTTCACTTACTAGTGTATTATGT
CCTAGCGACCGTAGTTAAGTGGCACAAGGTCGTGGGTTCGATCATCGGCC
GGGTCATACCAAAGATTCCCAAAATGGTACTTGATACCTCTCTGCTTGAT
GCTCAGTAATTAAGAGAAGAATCAAGGGTAAGTGGAGTAATCTAACGAGA
AAGAGTGAAGCCATCCCCCACCTTCGGGTGGATAGCTATCGAAAGAGGAG
CCTCCGGCTCGCTTCCGACTACGGTCGCAAACTTACTTACTACTATGTCC
ATCGATAAAATATGAAAAGAGGTGCTAGTGTCTCTGAGTAAAACATTATC
TTCAAAGGACCAAATTTTCTACGAATCACCGAGAGTTTTTTTTAGGTAAG
TGTCACACGAGCACACGATTAGTAGACAAACAGAGAGTTCATGAACGTCA
TGTGTACGTCGAGAGAATGTTGTATGGACGTTGTGAATGTTAGATGTACG
TCGAGAGAATGTTATATGGACGCTGTGAACGTCAAATGTACGTTGAGAAT
ATGTTATATGAACGATGTTAACGTCAAATGTACGTTCATAGAATGTTATA
TGGACGTTGTGAATGTTAGATGTACGTTAAGAGAATGTTATATGGACGTT
GTTAACGTCAAATGTACGTTCATAGAATGTTATATGGACGTTGTGAATGT
TAGATGTACGTTAAGAGAATGTTATATGAACGTTGTTAACGTCAAATGTA
CGTTCATAGAATGTTATATGGACGTTGTGAATGTTAGATGTACGTTAAGA
GAATGTTTTTCTTTCCATTTCAGATGGTCATACGGTATAATGATGTGGGA
AATCGTCACCATTGGTAAGCAAGAAATTCATGATATACATGACGTAATGT
CTTCTACGGAAATACCCCGGTTTTAGCCAGTAGTGGCAAATTTTATATAA
CTTTTGTTTAGTTTGAATTTTCCACTACTGGCTAAAACTGGGGTATTTCC
GTAGAAAACAATACGTCATGAATATCATGAATTCCAATTTGAGGATCCTT
TATTGATTTATTTTTCTTGACAAGCCTGTTGGCACGACCACGATTTCATC
CCCATTTCAATCTTAATTGCGTTAAAATCGCAATTCAAAATCATTCCAAT
TTGTTTAATTTTGACCTGGGAACAATAGGATTTCTATCCTCTCCCAGCTG
GCACACAACATTGTTTTAACGTTCATAAAACATCTATAACGTTATATGGA
CGTTGCAAATGTTAGATAAACTTTGAAACAACGTTGTGTGACAGCTGGTC
TGACCCCCCCGGACAAGCATTAGTTGATCCTCTGGACACTCAAAATTAGC
CTCAAACAGAGCAAAATTACCTCCAAACGGAGCATTTTCTGGAATTTGAT
TAATAGGTGCCGTGCCATACCCTGGTCACAAATCCAAAGAAATTCCTGCC
CTGTTAAACAAAGGTTATCGAATGGAGAAACCATTGCATTGCAAAGAAGA
ATTGTAAGTCACTGATCTCTAACTTTTTGACTAGATAGTACTTCCTATAT
CAAATGAAGCGCGTCTAGTTTTAGAGTTGACTACTCCACCATCTTGTTCT
CAATGACTGGCATGAACAACGGGATACGAATGTTTTGAAATTCGAACGTT
CGAAAATCTAAGGTGAAATAGAAAACAACATGGCGGGTTAGTCGACTGGA
TACGCTTCTACAAGAAATCTGTAAGCAAGTTGCTTATCTAGTGTGTAAGG
GAGACCTATATTAATACCCCAGTCATCGCCATATAAAAAAGATTGAAAAT
CATAGGTGTTTCAAAATAATTGCGAGTACGATACAAGAAATATTTTACGA
GTTCCGTAATTTTTTACGTAAGGCTTGGAAAATATGCAAAAAATCCGAAA
CAATTGAAATATTTCCATATTGTACGAGCAAATGTCTGATAACTGGTTTA
TCGGTGACCCAAAAATTGCACTTTTTGTGTTGGAGAAAAGCGCAGGGCAC
TTTTGTAGCAAAGTGACGTTAGATTACTGCTATCGCTACAATGCAACAAC
ATCTTTTCGTCAATTTATATTTTGTACATGTAAAATACAAGATATATTTT
ACTCTTTTTAACCAATGAAATTACATATATCTTTTGGATCACCGATAAAA
AGACGGTTGTGCAAGATCGTCCGGATAAATAAGGCAAACTGATCCTGTGT
ACCTTCAAATAATCGAACAAGTTTTGATTTTAATGGTTCTTCTATTTTTT
CAGGTATGAATTGATGTTGCAATGCTGGAGTGAAGATGAGAAAAAAAGAC
CGAATTTCAAATTCATTCACCAAAAATTAGAACGAATGATTGAGGGCCTG
GTAAAATGGATTCTATCAAACAAAGACCTTTTCAAAGATCCGAAAACTCT
TTTCGTGACTTTTTCTAAGTGAATCGAACCCTTAAAAGGCTGTTTTTTCC
TGACTTTTTCTCGGAGTACCTAAAAAAGCTAACTCCTAAAAATACTAGAC
TTTTGCGACCATCTTGAAAACCCCAACTCTTAAAAAGGACTGGATTTTTC
AATTTTTCTAACCTTTTTTTTAGTTTTGAACCCACAAAAAGATTGGATTA
CACCTTGTGTCACAGCCCCAGTGGGACTTTCTTCCATAGTGGGATAAAAA
TACCTATTGAAATCTCTATAGAAATCTTATTGTTTCAAGTTTAAAAAATT
CAATGGGGATGGTTTTGGAGTGCAATTTTTAAGCATTGAATTTCGAATGG
GGATAAAATCAGAGTCAATTTCCCAGCGGGGCTGAAATTCCAGGGTATTT
TCCCACTGGGGACGAAATTTTTGCCGAATTTTCTAGTGTGGCTGGGGTCG
CAGCGGGTCTGTGACACAGGGGTGTTTAACCTACCCGTTTTCATAAAACT
GTTTTTAAAAAAGTATGCAAATGAAATACCTTATTACACGAATATTACTA
GCCAAGTATTTAACGGCCTTGAAATTTGCACGAATTTTTCTGCTTTTTCA
AGGAAATGGCGGCTAGTTTTAATTAAGGGGATTTTTATTTACACGAAATT
TTTCAATTCGTGTTAATAAAATGACTAGTAATATTCGTGTAATAAGGTAT
CTTACTTTTTTTTCAGTCAACGTACATCAACTTGGAAGCTTACTCTGACG
ATTCGTATTTGACTTTCGGTGCTGGAGATGAAATTTTGGATGAAGATGAG
ATGATCGATATTGAGGATGAATGA Coding sequence (CDS) from alignment at sc0000235_pilon:190096..194819- >XLOC_044948 ID=XLOC_044948|Name=XLOC_044948|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0000235_pilon:190096..194819- (Clytia hemisphaerica_ch_hm2_pilon)
GGAATGCAATACGTTGCTGATCTAAATGGAATGCAATACGTTGCTGATCT
AAATATTGTACACCGTGATTTAGCTTGCAGAAACATTTTAGTTGGTTACA
ACCGTGTGTGTAAAGTTGCTGATTTCGGATTGGCCAAAAAAGTCGGAGAT
AATGGAATATATCAACGCACAGAACAGATTGTACACCGTGATTTAGCTTG
CAGAAACATTTTAGTTGGTTACAACCGTGTGTGTAAAGTTGCTGATTTCG
GATTGGCCAAAAAAGTCGGAGATAATGGAATATATCAACGCACAGAACAG
GCAAAACTACCTGTCAAATGGCTACCCCCTGAATCCATCAAATACGGACG
ATCATCTCTCCAAAGCGATATGCAAAACTACCTGTCAAATGGCTACCCCC
TGAATCCATCAAATACGGACGATCATCTCTCCAAAGCGATATATGGTCAT
ACGGTATAATGATGTGGGAAATCGTCACCATTGATGGTCATACGGTATAA
TGATGTGGGAAATCGTCACCATTGGTGCCGTGCCATACCCTGGTCACAAA
TCCAAAGAAATTCCTGCCCTGTTAAACAAAGGTTATCGAATGGAGAAACC
ATTGCATTGCAAAGAAGAATTGTGCCGTGCCATACCCTGGTCACAAATCC
AAAGAAATTCCTGCCCTGTTAAACAAAGGTTATCGAATGGAGAAACCATT
GCATTGCAAAGAAGAATTGTATGAATTGATGTTGCAATGCTGGAGTGAAG
ATGAGAAAAAAAGACCGAATTTCAAATTCATTCACCAAAAATTAGAACGA
ATGATTGAGGGCCTGGTATGAATTGATGTTGCAATGCTGGAGTGAAGATG
AGAAAAAAAGACCGAATTTCAAATTCATTCACCAAAAATTAGAACGAATG
ATTGAGGGCCTGTCAACGTACATCAACTTGGAAGCTTACTCTGACGATTC
GTATTTGACTTTCGGTGCTGGAGATGAAATTTTGGATGAAGATGAGATGA
TCGATATTGAGGATGAATGATCAACGTACATCAACTTGGAAGCTTACTCT
GACGATTCGTATTTGACTTTCGGTGCTGGAGATGAAATTTTGGATGAAGA
TGAGATGATCGATATTGAGGATGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000235_pilon | genome | sc0000235_pilon:190096..194819 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 457-564:109 |
| Aaloc | 361-456:971 |
| Aaloc | 265-357:1817 |
| Aaloc | 223-261:2401 |
| Aaloc | 151-219:3330 |
| Aaloc | 28-150:4110 |
| Aaloc | 1-27:4725 |
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