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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000235_pilon:196324..201443- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044947 ID=XLOC_044947|Name=XLOC_044947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5120bp|location=Sequence derived from alignment at sc0000235_pilon:196324..201443- (Clytia hemisphaerica_ch_hm2_pilon)
CGAAATTTGTTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGCTGGCA
CAGACCTTTTTCCACTGGTGCTAAAGGTTTGATATCGTCCATTTCAAAAC
GTTTTGAACATAAAAGAAATTGGCTCTAATTAGCATATTTACATGGTGCT
GAAGCGATTTATAGGGTCTAGAACCGGCTGGGAACAGTAGTTTTAACAGA
AAACCGGTTTCTAGTCCTCCAGAGCCGCCTGAGCTTACAGCGCTGTACTT
AATGCCTTAAAACAATATGTAAGCTTAGGGAAATTCCTCCATTCCTGAAT
GGGCTCTTCCAGAAAAAATCCGTTCATGGGGGGTGGAGGATATATTATTT
TTTCATGAATTACCCCTGAACATTTTGATTTTTAACCCCCTGGACACGGG
TTATACCCCTGGACAAACATCAAATCAACCCCGTGGACACAAAAAATTAC
CCCTGGACATTGGAATTTACCCCCTGGACATTGCAATTTTTTGGTATTTT
TTCAATACCCCTGGACAATTCATCCTCCACCCCCCATGAACGGATTTTTT
CTGGAAGAGCCCAATGTCTTAAGGAAAATATTACGTACATGTGAAAAAAG
CTTCATGTAGAATTTTAAGTTCATTGTATAAGTTGATGATATTTAAGATA
AGTCTAACAATTTTAGCACACCCCTATGTCTCAAACCTGCTGGGACCCGC
TTTACTAGACAATTTGGCTGAAATTTTGTTCCCGCTCGGAAAAATACGAA
TAATATTTTTCAGCCTCTCCACTTTTTTGACCTGAGAATTTCTACCCCCA
TTGACCCATTGAGATTTTCATAGAAATTTTCATTCCAACTGTCGGAAGAA
GTTCCACCGAAGGGCTGTTGTGGTAGATGGTGACCTTTAGGTTTTCAGTA
GCTATCTATCCGAAAATGATAAACATTTTTTAAAGATTGTTGTTTCATCT
AACCCCGGGCGTTTTCTTTTAGGAATCAGATATCGCGTGAAGTGTGGTGA
TATTGAGCGACTGGAAGATGGTGTACATCTTGGAGGAGCTGTCAAAGATA
TTTTAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGAAATT
TCTTGTGAGGTAATATGATGCAAAATAAATTACATCAAGAATAGCCCACA
GTCCACTTAAAGATTTTTTTATAGACTGGATGGCGCGAATAAGTGGCCCG
GTAGTACACGATGATATGCTTTTGCTTAGTTTTACAGTCCGCTAGGATTT
GAGCTGTTTTTTAGAAGGTAAAAGTTTATTAGAAATGTTTTAAGAAGCAA
AATTAGTTGGGGTCACTTTGATGAAAATCTTTCCACAACCCTCTTGAATT
ACCCGGAAGAATTTTCTGCCTTGCGTAAGAACTTTGCCACCTTTTCCTGG
CTAATTTTTCCCCTTTAAGTTATAAATTAATGTCGTCGACAATTTTGTTT
TGAATTTTAGGTGACCGGAATTTCATCTTTAAGTAAAGAAGGAGCAACTG
TTTTCAAAGCAATCACAGGTATTATGATGTTTCAGTTTTCTTTTGATACT
TTCGTACTCTGTTTCTCTCCTTATAAAAAAATTTACCCAATTTTTACCCA
ACTTTAAATAAAGAATAAATAAAAATAAAAAAAAATAAATAAAAAGCCGT
GTCCGTCTAGTATAGGCAAATTTTTACCTCACAATTTTCCTGTTTCAATT
TCACTTACCCTGAGAAAGAACTTTGGAAAACACTTTCACCAAAATCATCG
ACGCCAAAATCTATAATAAATAAGGTGGTGGGTATAAGTATGAACAAGGT
GAAAATTGACCAAAAAATGATAAATGGTGGAGGGCGATTTTTGAAGAATG
AAAATAGTTATTTTAGCTTAAAAATGATCAATCAACGGTTAAGATTCGTG
ATATTCATGAAGTAATGTTTATACGGAAGTACAAAAAAAAAACAGTAGTT
TGCCAATATTGATTTTAAACAAAAACACCGGCGCTACTTTGGGGGCTTCC
ATATAAAACATTGCATCATCACGTGTATCATGAATTGAGATTTTCTTTCA
GTTCCTGCATCCAGTGATTCAAGCGGAGCGAGTGGTGAAACGATAGCAGG
CGGAATCATTGGTGGTATTGTGTTTTTGGTCTTGCTCATTTTGTGCATAG
CCGTTATCTATCGAAAGTGGAGAGAACGAAATGAGGTAGGTTCTCTAGCT
AGGTCTTTCTACTTCTTTAAGAAACAAAGCTAAAGATAGGTAGACTTTAG
GACAATCGTTTTTTCAGACTCAAAAAGCGAGCGAGCCTTAACTGCTGCGT
CATAGGCGACTATTTCAAGAGTCTTAAGATTTGGTTGGAACAGGTTGGAA
CGATATCACACGGGAAAAGTGAGCGTAGGAGTTAGGTAAGCGGAGGAGAT
AGATTTGTCAGCGGGCGGGGGGCTGAAAGCATTCATTCTTTGTTAATCAA
CACCCTTTCTCCAACGTTCGCTTGTTCTTCTATTTTTGAAAACGCCCGCC
ACCCTTATGTTCCCGCCCTCTGATACAATTTTTATGTCTGCTGTGCAAGT
TGACTGACCGTCCGAGCATAACATTCAGTCTAACCTCAAAACAAAATTCT
GAAACTGAAGTGTTTCAACCTTCTCTTTCTTTCTGCAAAGGTTTTGAAAG
CAGTCTTTAGTCTTTTTAAGGGTCCATTGTCGGAGGTCTGGTATTTTGCA
TTCCAACATTCTCCAGGCTCATTACCCAAACACCCTAATGGGGCTATTTT
CTTTTTCCAAAGATTTTGAAAGCAGCTCTGAACACAACCAAACTAATGAA
AAGAGCTTCCCCAGATGGCACACAACGTCAAAACAACGTCCATGTGACAT
TCATAACGTCCAAATAACGTTATTTGAACGTTAAAACAACGTTGTGTGCC
AGCTAGGTCAGAACCACAAATGCACTTGTTAAACGTAGGAAAAAACAATT
TCAGTGACTTTTTACGGAAAAAAGCAATTTTTTGCTTCAAAACCCGTGTA
CTGATTACAGAACTTTCTTGTTTGTCGTCAAGTTTTTGAAGGCCGTCTTT
AGACTTTCTAAGGGATGATTGTCGAAGGTCTAGTATTTGCATTCCCAACA
TTCTCCAGGTTCCAAACCTTCTGATAGATAGAGTCGGTATCTTTGCGTGG
ATAGCGTAGTAATCTAGCACTTTAAGGCCGTCTTTCGATTGTTTTCACGG
GGTCCACGGCTAGCCGAGCAGGCTATCCTATGAACTGAAAGAAACATTAG
AAGGAGCGGGGCTTCGAACTGCGAACCGTTCGAACTCCTGGCTTGTAAGG
CTTACACCTTTGACCACTTGACCATTGCTCCATCAAACTATCTTCTATCT
TCTTCTTCCGAAGGTTTTGAAAGCAGCTCTGAATACAATCAAACTGATGG
AAGGAGGATCAGAACCACAAATGCATTGTCGCCGTGAGTTGGAACAAAGG
ATGCGGAATATCTACGTTCCCTTGCAAGTGTTGTTGAATCAGAATGTCGT
TGATTTGGAGCAAGAAGAGCCAATCTATGAAGAAATCCCTATCTCAGGTA
ATAGAAATCAGTGATAATTTTCGCTCATTAAACCCATGGTCGATTCGGAG
CAAGAAGAGCCGGTCTATGAAGAAATTCTCATAGCAGGTAGTGTAACCTA
TCTAGCCACTTTAAGAAATCAGTGGCATATTCTCCCAGGGAGTCACTTAT
TTAACCGTAGTCGATTTGGATCAAGAAAGGCGGGTTTATGAAGAAATTTC
CATCTCACAGGTAATTGTATACCTATAATTCGATCGAATTGATGATGCTC
TTCAAGGTACTATTCAGGAACTTCTTTTCTGAAGGAATTAAAATAACGAC
CTACGTGAAGGAATTACTTTCGTAGTAAAAATTAACTTAGATTCAATTTG
GAATTGATTTTTCTTTTCTAGGTTACAATTATCCTTACCGTAAACTGAAA
AAAGTTCAAGAACTCGGTCAAGGGAATTTCGCCAGAGTCTCTCAATGTGA
AGCTGATGATATCTGTGGAAGACCTGGAAAAACCCTGGTGGCTGTTAAAC
AACTTAAAGGTTTTTTTTTCAGTTATCCCTTCGTTAGTCCATCCATTCAC
TTATTCATTCATTCTTCTACTCATTCAGTAATTCTTTCATGCGTTAATTT
CTTCATTGTCCATTCATTCATTCAGTAATTCATTCATTAATTTATTTATT
TTCATCATTAATCCATTCACTCGCTCACTCACTCACTCACTCACTCACTC
ATTCACTCAATCGTTCATTTTTTTCGTTCATCATTCGCCCTACTCGCTCT
TTCTGTTTTTCATTCATTCAATCAATCATTCACTCACCCACCCGCAGTCT
TTCTGCCACAAATTCATCTTTTCTCTCTTTCATTCATTCGCCCATTCGTT
TTACTTATCACTCTTGACTCCATTCATTTATCCATTCATTCTTTAGATGA
CATCAAAATAACAGACGAGAAAGACTTTGAAGATGAACTTGAGCTGATGA
AAGAATTGAAAGGTTGTAAAAATGTCATCAGGCTTCTCGGCGCATGCTCT
TGTGAGTACAATTGATTTCTTATGCTCCATTCACAACCAATGCATCAGTA
GGGCAAAGGTAGAACCATAGATTTAAAAATGTCGTGCCTTGACTGAAAAT
TGTGCCGTATCTAGGTAGGAAATCCTACCTAGGTCACGGGGCATTACAAT
AGGATTTCAGCGCTTCTCTGATTTTTGGAAAACAATAGCAACTATATTTC
TCGTGGTTTTTTGCATGTGATGGCTTAAAGCACGACATCTGCTTTATAAA
TCTGTGGGTAGAATGTCCAGCTAAGGTGAACAAGGTTGTAGGTTCGATTC
CCAAAAATTATTTTACTCTTTTGTTTAAAAATGCTGCGTTAAGCAGATGG
TTAAAGACGTTAAGTTAAATGATGTCCTTCAATAAATGTTTTACCATCTT
CAGATCCACGATGTATGATCGTCGAATACCTCCCAGGGGGAGATCTCCTG
TCTTTCATGTTGAAATCACGACAATATCGCGCCCAGACGGAGGGTGAAGA
ACTCTCACCCACAGGTGGTGGAGAACATCAAAAAACACTGGAAGAGATGG
AGGAAGCAAACCCCTATGCA Coding sequence (CDS) from alignment at sc0000235_pilon:196324..201443- >XLOC_044947 ID=XLOC_044947|Name=XLOC_044947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1998bp|location=Sequence derived from alignment at sc0000235_pilon:196324..201443- (Clytia hemisphaerica_ch_hm2_pilon)
CGAAATTTGTTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGCTGGCA
CAGACCTTTTTCCACTGGTGCTAAAGCGAAATTTGTTGCTGGAGATGAAT
GGTCGTTTCTTGGTGGTTCGCTGGCACAGACCTTTTTCCACTGGTGCTAA
AGGAATCAGATATCGCGTGAAGTGTGGTGATATTGAGCGACTGGAAGATG
GTGTACATCTTGGAGGAGCTGTCAAAGATATTTTAATCGTTAACATTGAC
CTTGGTGTTGAAGTCAAACCTGGTGAAATTTCTTGTGAGGAATCAGATAT
CGCGTGAAGTGTGGTGATATTGAGCGACTGGAAGATGGTGTACATCTTGG
AGGAGCTGTCAAAGATATTTTAATCGTTAACATTGACCTTGGTGTTGAAG
TCAAACCTGGTGAAATTTCTTGTGAGGTGACCGGAATTTCATCTTTAAGT
AAAGAAGGAGCAACTGTTTTCAAAGCAATCACAGGTGACCGGAATTTCAT
CTTTAAGTAAAGAAGGAGCAACTGTTTTCAAAGCAATCACAGTTCCTGCA
TCCAGTGATTCAAGCGGAGCGAGTGGTGAAACGATAGCAGGCGGAATCAT
TGGTGGTATTGTGTTTTTGGTCTTGCTCATTTTGTGCATAGCCGTTATCT
ATCGAAAGTGGAGAGAACGAAATGAGTTCCTGCATCCAGTGATTCAAGCG
GAGCGAGTGGTGAAACGATAGCAGGCGGAATCATTGGTGGTATTGTGTTT
TTGGTCTTGCTCATTTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGA
ACGAAATGAGGTTTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAG
GAGGATCAGAACCACAAATGCATTGTCGCCGTGAGTTGGAACAAAGGATG
CGGAATATCTACGTTCCCTTGCAAGTGTTGTTGAATCAGAATGTCGTTGA
TTTGGAGCAAGAAGAGCCAATCTATGAAGAAATCCCTATCTCAGGTTTTG
AAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGATCAGAACCACA
AATGCATTGTCGCCGTGAGTTGGAACAAAGGATGCGGAATATCTACGTTC
CCTTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGGAGCAAGAAGAG
CCAATCTATGAAGAAATCCCTATCTCAGGTTACAATTATCCTTACCGTAA
ACTGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGCCAGAGTCTCTC
AATGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAACCCTGGTGGCT
GTTAAACAACTTAAAGGTTACAATTATCCTTACCGTAAACTGAAAAAAGT
TCAAGAACTCGGTCAAGGGAATTTCGCCAGAGTCTCTCAATGTGAAGCTG
ATGATATCTGTGGAAGACCTGGAAAAACCCTGGTGGCTGTTAAACAACTT
AAAGATGACATCAAAATAACAGACGAGAAAGACTTTGAAGATGAACTTGA
GCTGATGAAAGAATTGAAAGGTTGTAAAAATGTCATCAGGCTTCTCGGCG
CATGCTCTTATGACATCAAAATAACAGACGAGAAAGACTTTGAAGATGAA
CTTGAGCTGATGAAAGAATTGAAAGGTTGTAAAAATGTCATCAGGCTTCT
CGGCGCATGCTCTTATCCACGATGTATGATCGTCGAATACCTCCCAGGGG
GAGATCTCCTGTCTTTCATGTTGAAATCACGACAATATCGCGCCCAGACG
GAGGGTGAAGAACTCTCACCCACAGGTGGTGGAGAACATCAAAAAACACT
GGAAGAGATGGAGGAAGCAAACCCCTATGCAATCCACGATGTATGATCGT
CGAATACCTCCCAGGGGGAGATCTCCTGTCTTTCATGTTGAAATCACGAC
AATATCGCGCCCAGACGGAGGGTGAAGAACTCTCACCCACAGGTGGTGGA
GAACATCAAAAAACACTGGAAGAGATGGAGGAAGCAAACCCCTATGCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000235_pilon | genome | sc0000235_pilon:196324..201443 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 835-999:166 |
| Aaloc | 730-831:673 |
| Aaloc | 592-726:1198 |
| Aaloc | 406-588:1758 |
| Aaloc | 274-405:3068 |
| Aaloc | 214-270:3661 |
| Aaloc | 79-213:4147 |
| Aaloc | 1-75:5121 |
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