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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000235_pilon:218664..221252- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044944 ID=XLOC_044944|Name=XLOC_044944|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2589bp|location=Sequence derived from alignment at sc0000235_pilon:218664..221252- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAAAATGTTCAAAAAGGAAAGCAAACGTTTTTCAATATTTATACTCAT
TGCTGGTGCAATTGCCTTACAATTGACCGCGATCCAGACTGAATGGTGGT
GGCAACAAGCATCGCCAGTTAGAAGTGTTGCAGAGATTAAATCATCCAAG
ATCTTCTTTTGGAAAGGTTTAAGGAAAGCGTGTTTGTCAATTCCACCGGC
AACCGAAGAAATATGTAAACCACTGAAGGATTATGGGATGGATGGAGGTA
AGTTACGTGATTTTACATTATAGATACTGTCCTCGACTACATGTATTTTG
TCTACCCATATAACAGACTTGCATTATGCTTAGCATTCTATTGTTCTTAA
ACAATAGAGCCACTGTTAAAGGGACATTACAGTAGTAAAATGTAAACATT
GCGCGCACCACGTGTCATTAAAGAGAACAATTAAAATCACGTGTCCAAAA
CAAACTTGTAAAACAATTGAACAATCATAATTATCCATATTTGGTTTGAT
TTCTCATTTTGACATGTGACATTTGTTTTGATTTTGTATCCGCTGCATAC
AGTTTGTTTATAAATTTCGCAAGTACTGTTATGTCCCTTTAAGGTACCAA
AAACTGAGCCTGCAAATGCTCATAAACTTTATGCTTATAAAAAATATGAA
GGTTGTTCCAAATCGTTTCAGAGGGTGTATCTGCCACAACTATCGTGGGT
GTGCGTTACACCACTATAACGATTGGGTGTTTTAGAGTCCGTAAAGCTTT
AAATTGTTCTTAACTTGTTGTTAATATTTTGGTAATGAAAGCCTCATGTT
CTTATAAAGATTGTTCTTGTTTTATCAGATTCGATAACGGCAGTCCGCTG
GTTAATGTATATTTCAATTGGAATTGCATGTTTGGAGCTTGTTTCCATGG
TGATCATCTATTTGGTAACTCGTCGTTTATTCATGGACCTCGTGGCTATT
TCGTCGTTACTTGCTGGTGAGCTGGCTTTTATCAATTATTTCAGAGCTGG
AATATACTAAAAGATGCCATTGGATTGCCTTTGAAAGAGGGCAACTTGCA
ACTATATTTACCTTATTTTTGGGTTTTTGCATTACAATTTCCAATCCCCC
CCGGCAATGAGGTTCCCCCCGTTTATTAAAATTTTGAAAATTTTCCAAAC
CTCCCCCCCCCCTCCCCGTTGTTGTTTTTCAGCTTTTAAATTTTTTACCT
TGTTCTTAATTTGGGATCAAAGCTTTGCTCTTAGGTTCAAAATAAACGGG
GGGGTTAGAAAATTTTCAAGATTTAAATAAACGGGGGGACCCAAAAATAA
GGTAAATATAGGCTAAAATCAGGCTATTTTGAGCAAAATAAGGGGCGTTC
TCTTTGACAGCTGAAAATAATCTTAAAAATTAATAAACGGGGTTCTTAAT
AAGGTTCGGGGGGTTGGAAAACTTTCGAAAAATGAACAAGCGGGGGGCCC
ATTTATTTGGAACCTACGAGTATGTTCTTACAGTGGAGTCTCCATAACTC
GAACATGCACGGGGGAATACAAATTTGTTCGAGTTTAAGAAATCTCGAGT
TATGGAGCAAGGTTTATAAGGCATTGTTAACTGAATGGACCATTTAACTT
GTTTGAGTTAAGGCCCCTAAGGAGACATTCAAGTAGTAGAGGTTCGAGTT
AAAGAGGCTCCACTGTATCAGTGGCGTTGTGGCAGGGGGGCCGGGGGGGG
CATTCCCCCCCCCCCCCAGCGGAGCTTTAGTGAAGGGGCTCCGAAGAGCA
AGGGGCACCAAAAGAGATTTTTTTTAAAACGCCCCAATCTTAAAAATCAT
ACTTTATGCACCTTAAATTGCGCCCCAGGACCAATTTTTCTGAGATAGTT
TTAAAATACTTGCAATTTTTTTTCGCTCGCAATACAACTAATTGGTAATT
TCTTTGCAATCTAGCTAAATTTTACAAGTTTTCTTGTGTACAACATAGCA
TTATTAAATGAAAACCTAACTGCACCCCAAGACCAATTTGCTGACAACAA
TATTGAAATCATAAATCATAAATTTTTTCGCTCACATCGCTCGCATTACA
CATTGTTTCTTTAATTTGTCAAATTTGTCTATTTTTATTTAGTGATTTAG
GGTATCTTGGCAGTCGATTCTCAGAATTTTCTAGTCCCTTTTCCATTCAT
CAAAGATATCTAAACTAAATATTTCCTTCCTCATTATGCCTAGGCAAATG
AATTAGTAAAAGCCTAGAAACTGGTGGGTGGGGGCACCACTTTGAAAGAT
TGGGGGGAGGGGCGCCATTTAAAAAAAATTGACTTTGGCCCCTCCAGAAA
AATTTTCCCACAACGCCACTGCACTGTATATAGTTTGTTCTTATACATTT
CAGCATTGGTGGCGACAGCTGGTCTTGGTCTGTACACCAAAGAAAACCCA
ACGTTGTTTAGTTTCTTTGATCTCTATGGTTACTCATACATCTGTGGATG
GTTAGGTGTCTGTTGTCATGTGCTAGCCTCATATGCTTCACTGTTACTAC
GTTTGGACCATAATGGCGTCTCGTTCCTTGGTGAAAAAGAAATGGTTCGC
CATGATCGCAAAAAGTCGACCGCCGTTGAACTTGAATGA Coding sequence (CDS) from alignment at sc0000235_pilon:218664..221252- >XLOC_044944 ID=XLOC_044944|Name=XLOC_044944|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1242bp|location=Sequence derived from alignment at sc0000235_pilon:218664..221252- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAAAATGTTCAAAAAGGAAAGCAAACGTTTTTCAATATTTATACTCAT
TGCTGGTGCAATTGCCTTACAATTGACCGCGATCCAGACTGAATGGTGGT
GGCAACAAGCATCGCCAGTTAGAAGTGTTGCAGAGATTAAATCATCCAAG
ATCTTCTTTTGGAAAGGTTTAAGGAAAGCGTGTTTGTCAATTCCACCGGC
AACCGAAGAAATATGTAAACCACTGAAGGATTATGGGATGGATGGAGAGA
AAAATGTTCAAAAAGGAAAGCAAACGTTTTTCAATATTTATACTCATTGC
TGGTGCAATTGCCTTACAATTGACCGCGATCCAGACTGAATGGTGGTGGC
AACAAGCATCGCCAGTTAGAAGTGTTGCAGAGATTAAATCATCCAAGATC
TTCTTTTGGAAAGGTTTAAGGAAAGCGTGTTTGTCAATTCCACCGGCAAC
CGAAGAAATATGTAAACCACTGAAGGATTATGGGATGGATGGAGATTCGA
TAACGGCAGTCCGCTGGTTAATGTATATTTCAATTGGAATTGCATGTTTG
GAGCTTGTTTCCATGGTGATCATCTATTTGGTAACTCGTCGTTTATTCAT
GGACCTCGTGGCTATTTCGTCGTTACTTGCTGATTCGATAACGGCAGTCC
GCTGGTTAATGTATATTTCAATTGGAATTGCATGTTTGGAGCTTGTTTCC
ATGGTGATCATCTATTTGGTAACTCGTCGTTTATTCATGGACCTCGTGGC
TATTTCGTCGTTACTTGCTGCATTGGTGGCGACAGCTGGTCTTGGTCTGT
ACACCAAAGAAAACCCAACGTTGTTTAGTTTCTTTGATCTCTATGGTTAC
TCATACATCTGTGGATGGTTAGGTGTCTGTTGTCATGTGCTAGCCTCATA
TGCTTCACTGTTACTACGTTTGGACCATAATGGCGTCTCGTTCCTTGGTG
AAAAAGAAATGGTTCGCCATGATCGCAAAAAGTCGACCGCCGTTGAACTT
GAATGACATTGGTGGCGACAGCTGGTCTTGGTCTGTACACCAAAGAAAAC
CCAACGTTGTTTAGTTTCTTTGATCTCTATGGTTACTCATACATCTGTGG
ATGGTTAGGTGTCTGTTGTCATGTGCTAGCCTCATATGCTTCACTGTTAC
TACGTTTGGACCATAATGGCGTCTCGTTCCTTGGTGAAAAAGAAATGGTT
CGCCATGATCGCAAAAAGTCGACCGCCGTTGAACTTGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000235_pilon | genome | sc0000235_pilon:218664..221252 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 397-630:235 |
| Aaloc | 259-393:1760 |
| Aaloc | 10-255:2590 |
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