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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:3257874..3261901- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044938 ID=XLOC_044938|Name=XLOC_044938|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4028bp|location=Sequence derived from alignment at sc0000002_pilon:3257874..3261901- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACAATCAAAGTGCAGTGTCAATAAAGTCCAGTGCTTCACTGCTGTA
CAATAATCTAGATGTCCTTTCATCTGCATCTGGTCTTCAGTATGCAGTTG
TTCACAAATCCAACGTTTGGGTGTTTGATGCAGAAGAAATACAGACCAAC
CAAGCTGCATACAGAAGGGTTGTTTGTAAAGGAGAAGGCACACAAACAAG
CTCCACCATCATGCAGGTCAGCAAATTACACAAATGATATAAAAATCATG
CTTTAATTGATAGATACAGAATGTCTTAGATGGACTTATGATCATATTAT
AAGATCTTTTAAAAGTTCGACGTCCCATTTTTTTTTCAGGCCAAATGGTG
TGTTTTACCACAGAGGACTCTTCTTGTTGTTGGTTCAGTCAAAGGTGCAC
AGGTACTTTCCCTTTGTCCATTTCACATCCTCCTATGTCTCTGTGTTCAT
TAGATACCTTTTTGATTATCTTTCTAACATTGAGGGCAATGTTATAAACT
ATATTGGCTATCTTAGACAGCTGGAATATCAAGGGAAAAATCTTAATTTA
GTAATAAAATGGTATTTGGTATTGATATTTTTCCTCTGTTCCCCTATTAG
TTGATATATAACGTAGCCTCATTTTCTTTAGATGTTTGATGAGAATGGGT
CAATGATGATTTTCTGGCAAGCCTTACAGCCACATCCTAAAGAAGGGAAA
CCACAGTTCGTCAGAGGAATTACTGCAGCTGGTGATAATCGAATATGTAT
TGGTGAGGAGGAATTGTTGATTGAATTTTACTTTCATTGATTTCTAAGGT
CTCAAATTTGCTAATTGAAATTCGATCTTTTTGTCGGATTGCCAATTGGG
TCGGAGTAATTTAAATGAAATTTGAAACTGAAATAGGTCTATGAACCCTG
CTCCCTAACTGTGGAATGCTGTCTATCAAGCTTCCATTTTATTTTAGGAA
CTGCGGATGGGAGTATTTATGTCTTCGATATTCCCTCAAAAGGAAATGGT
GTTAAACTACACGACACTATCAATGCACACACATGTGCATTGACAGATTT
ACATGCACTGGATGATTGTATGGTTTCAGCAGATGATATGGGCAAAATCA
TTTTGTGGAAAGTTGGTGGAGCAGTCACCAAAACGCTCGAAATTGAAGGT
TTTGGGTAGGCTTTAGTTTTGTTGCTTTGCTGTGTTTTTAATTTTGAGCT
AGTGGCTTGAGTAATGGATACTATTGTATAGCAGTGATTTTATTTGTGTT
CACATGAACACGAAAGGCTGATTTTTTTTATGTTGTTAAAGGTTTTCTTA
CGGGAATAAAAGGGGCTTATTTTAGGCAGTGTCTTCATGCTGAGTCAGAT
AAATTAAAGCTACTTTTTTAAGCAACGATATCCTGCAAACAAGTGAAAGA
TCGAAAGTTGTTTCGAGATGTGACCTCACATTCCATTGCTTTTGTAAACA
AGAAAATAGCAAAGTTGATTTCGAGCAAATTTTCGTTTTGATCGTTACGA
TCGTAACGTAACGTTAAGATCGTTTTGATTATAAGATAGAAAACGTTCCA
CTTATTATGAACACAAAAACATTCGAAAGAGTATCAGTAAAAGTCCCTTT
GTTTGAGGAATGTTTTTTTAATCAATGTATTTTCATCTTTTCAAAACATT
TTTCTAATCTTGTCGCACTTGTTTTTACTACATCAGCGTCATCAGACTTT
TCAATCAAAACAAAACCTTTAACTGACGGTAGCTAAGATGTTCCCATTAT
TTATGTCTAGATTTCCATGCACGAGCGTTCGACTGCACGAGAACTTCATA
ATAGCAGCGTACGGTTCTGGACACCTTCGAAAGTTTAACTGCAAGACGGG
AACAATAATCGTTGAAGTTGCAGCGCACGCTAAATGGATTAACGCCATGG
ACCTTTCACAAGACGGAACACTGGTAAGACAATTACTTCTTCTTTTGAAA
CATTTATAACAAAGATTTCTCGATAATATATTGAACGATCAAGTGGAACA
ATAAAAAAAACAAAGTTCCTCACTGATTTGTAGGTGATTCATTTAGTTTG
ACACATAGCCTTGTCTGCATCATTTGTTTTTCATTAAATTTATTATGATT
GAAGAACTTGAGATGGTGCTCCGATTTTTTGAAAAATAATGTCTACACTA
TATAACTCTAGATATCTTAAAAATTATATTCTACGGGGCACATTCAGTAA
CGTTATTTGAAAGATTTGATCTGATTCTATTCAATTCAACTGCACAATCA
TTATCATTCTGTCGCTTGCAGCATGGTATCTTTCTAAAATACTTTCTAAA
GACAGCATTTGAATATCCATAAATAAAAGCATTGCCAACAATATTCAGGT
TAATCAGGGCTGCCAAGAAGGAGTCTATAGATTCGCCTGTGCAGGTCAAA
AATATTTGGGTATCGAAAAGCATATATATTTGATAGATACTGAAGGGAAG
CCAAGTGATAATCACCAAAAACATCATTGTGATGTACATTCGATTTTCTG
TCACCCTCCCACGGAGTGAGCTCTCCCTTTGAGCGTCTCTGCGTCGCTTT
CGAACAGTCTCGAAAATGAAGCCGTACAGCAACATACTTGCGAAAAGGGG
TAGCAGTAAGAAAGCAAGGAGCAATCCTTCAGCCCAATTTGGCATTAAGA
AGTCGTAATACCCAGGCTCTGGATAGTCTTGAATAAAAAAAGCAAATATG
AAAATAGCAGCCGATAATGCGAATGCCACGAACATAGATTTATTAATCAA
ACTTCTGGTAACTCTCAAATGACGGAGAGGGTACTTCACTGCATAAAATC
GATTCAGTGTTAAGAAAAATAGGATGAATATCGTCCAACCAAAACAAAAA
TACCAAAAAGCGTTGACAAAAACAATCCATACAGGAGAAATGAAATATTC
TTCCCAATCATATGTGTAATAAGCTGTAGCGTCCAGAGGGAGCTGGAATG
GACACGTCACCAAGTCTGAAACTGCTAACCATAAGATGAACACAAAATGA
TATGACTTCAAAAGTTGTCCCTTTATTATCACAAAACAAATGAAAAGGTT
TCCTGGAATTCCAAATATGGTTATCAAAGTACTGTATAGCCCAAAGCTCA
GGTTTAAATATTTAAGTGATTTGCTTTGCCAGCATGGAGCAAGTTCATTA
TCAATTATCTTGGACGTTGAATTACCTCTGAGCGACTTGTTCATTATGTT
CTCGATATTTCACTTGTCTCTCCATATATAATCTTTGATTTCAGAACGTG
ATGTTATGAATCATTCTAAGAACTCGTTATAAATCTACAAACTCATGTCT
AATTACTTTATACCGATAAAAACAAACAAACAAACCGTCGAATCTCTTTA
TTAATTCTTTAAGATATGAGGTAGAAGAATAAATAAAAAGAAAGTAGTTT
TAATAAAACTCACTGGGAGTTAATCACCATGGCAATAATTTCAAAACGAG
GCAAGTGATGTTCGTGACGTAATTTATGAAAAGGTCAATTAAAACAGCAA
TTTAAATCTCAGCTCAATAATCCTCACAAAAATGATGCAGCTCAGGCTCG
TTCTTCAAAAGAAAATATGAGAATTTAACAAATTTTTCTCTTTCCAATTT
GTTAGGTGGTGACAGCCTCAGAAGACACCTTCCTTAGACTTTTCGACGTC
GAGACGGTAAGTAAAACTGTTGGACTTAAGTTACGCCTTGTCTAAGCTCT
TACAAGGCGAATGTTTAACCCTTCGATACGTCCTAAGTAATTCAGCCAAG
TTGACTTTAAGAGAAAACCTTTCCAGTTGAAAGAATTAATATCGAACAGG
CACAGTTGGGTAAAAGTACCAAATTAGTTTGAGTAGGGTTAAGTAAAAAA
AAGCTTCTTTGATTTGATTTTCACCTTTTCTCTCTCCATTTAGTTCGAAC
TGAAGTTTCAGAAAGCGATCACAGACGTTCAATTGACAGGTGTTCGTTTC
ATGGATGCGATCGACAACAGTTTCGGTGTCACCGGTTATGATTCTTCCGA
AATCACCATCTTCAAACCTGCTAAATAG Coding sequence (CDS) from alignment at sc0000002_pilon:3257874..3261901- >XLOC_044938 ID=XLOC_044938|Name=XLOC_044938|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1914bp|location=Sequence derived from alignment at sc0000002_pilon:3257874..3261901- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACAATCAAAGTGCAGTGTCAATAAAGTCCAGTGCTTCACTGCTGTA
CAATAATCTAGATGTCCTTTCATCTGCATCTGGTCTTCAGTATGCAGTTG
TTCACAAATCCAACGTTTGGGTGTTTGATGCAGAAGAAATACAGACCAAC
CAAGCTGCATACAGAAGGGTTGTTTGTAAAGGAGAAGGCACACAAACAAG
CTCCACCATCATGCAGATGTACAATCAAAGTGCAGTGTCAATAAAGTCCA
GTGCTTCACTGCTGTACAATAATCTAGATGTCCTTTCATCTGCATCTGGT
CTTCAGTATGCAGTTGTTCACAAATCCAACGTTTGGGTGTTTGATGCAGA
AGAAATACAGACCAACCAAGCTGCATACAGAAGGGTTGTTTGTAAAGGAG
AAGGCACACAAACAAGCTCCACCATCATGCAGGCCAAATGGTGTGTTTTA
CCACAGAGGACTCTTCTTGTTGTTGGTTCAGTCAAAGGTGCACAGGCCAA
ATGGTGTGTTTTACCACAGAGGACTCTTCTTGTTGTTGGTTCAGTCAAAG
GTGCACAGATGTTTGATGAGAATGGGTCAATGATGATTTTCTGGCAAGCC
TTACAGCCACATCCTAAAGAAGGGAAACCACAGTTCGTCAGAGGAATTAC
TGCAGCTGGTGATAATCGAATATGTATTGATGTTTGATGAGAATGGGTCA
ATGATGATTTTCTGGCAAGCCTTACAGCCACATCCTAAAGAAGGGAAACC
ACAGTTCGTCAGAGGAATTACTGCAGCTGGTGATAATCGAATATGTATTG
GAACTGCGGATGGGAGTATTTATGTCTTCGATATTCCCTCAAAAGGAAAT
GGTGTTAAACTACACGACACTATCAATGCACACACATGTGCATTGACAGA
TTTACATGCACTGGATGATTGTATGGTTTCAGCAGATGATATGGGCAAAA
TCATTTTGTGGAAAGTTGGTGGAGCAGTCACCAAAACGCTCGAAATTGAA
GGTTTTGGGAACTGCGGATGGGAGTATTTATGTCTTCGATATTCCCTCAA
AAGGAAATGGTGTTAAACTACACGACACTATCAATGCACACACATGTGCA
TTGACAGATTTACATGCACTGGATGATTGTATGGTTTCAGCAGATGATAT
GGGCAAAATCATTTTGTGGAAAGTTGGTGGAGCAGTCACCAAAACGCTCG
AAATTGAAGGTTTTGGATTTCCATGCACGAGCGTTCGACTGCACGAGAAC
TTCATAATAGCAGCGTACGGTTCTGGACACCTTCGAAAGTTTAACTGCAA
GACGGGAACAATAATCGTTGAAGTTGCAGCGCACGCTAAATGGATTAACG
CCATGGACCTTTCACAAGACGGAACACTGATTTCCATGCACGAGCGTTCG
ACTGCACGAGAACTTCATAATAGCAGCGTACGGTTCTGGACACCTTCGAA
AGTTTAACTGCAAGACGGGAACAATAATCGTTGAAGTTGCAGCGCACGCT
AAATGGATTAACGCCATGGACCTTTCACAAGACGGAACACTGGTGGTGAC
AGCCTCAGAAGACACCTTCCTTAGACTTTTCGACGTCGAGACGGTGGTGA
CAGCCTCAGAAGACACCTTCCTTAGACTTTTCGACGTCGAGACGTTCGAA
CTGAAGTTTCAGAAAGCGATCACAGACGTTCAATTGACAGGTGTTCGTTT
CATGGATGCGATCGACAACAGTTTCGGTGTCACCGGTTATGATTCTTCCG
AAATCACCATCTTCAAACCTGCTAAATAGTTCGAACTGAAGTTTCAGAAA
GCGATCACAGACGTTCAATTGACAGGTGTTCGTTTCATGGATGCGATCGA
CAACAGTTTCGGTGTCACCGGTTATGATTCTTCCGAAATCACCATCTTCA
AACCTGCTAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:3257874..3261901 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 823-957:136 |
| Aaloc | 772-822:424 |
| Aaloc | 610-771:2268 |
| Aaloc | 403-606:3080 |
| Aaloc | 280-399:3398 |
| Aaloc | 217-279:3690 |
| Aaloc | 1-216:4029 |
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