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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:3416216..3418793- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044931 ID=XLOC_044931|Name=XLOC_044931|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2578bp|location=Sequence derived from alignment at sc0000002_pilon:3416216..3418793- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAGTGGAATAAATTTTGTGGAGACGGTTGAAAAATTTCTGTCAGC
AATTCGTTCGATAGCTAACGATGATTGTGATAAGGTCATAGAGGAAACGT
GGAATGATTGCACTGGTGGTGATGCAGATAAAAAATCAGCGTTAGATCAA
GCTTTCCGACAATTCATTGCTGGTAAGATAACAGATAGTTGTGTTGTTGT
CGGCCATCAAAACGAAGATGGCACAGACATGGAAATTGTCAAGAATGGAG
ATACATCATTTGAGAAAATCACATTGTTCCAAAATTCATTGAATATGATT
ATTCTCCACGCTCAACAAAACAAGTGCACATCCTACCTTCCAATCACATT
GATGAGTGATATTTTTGATGCCTTAACATTGACTGAATGTGAAAAACTTT
TCAATTTTGTAGAGGACAATGTTAAGATATGGACAGCTGAACCTTTTTTC
AAACTTGGTAAAAATCACCTATTGCGCATGTGCAATGATATCCTTCGAAG
ACTTTCAAAATCTCTGAACACTATCTTTTGTGGTCGCATTCAACTGTTCT
TAGCTTGTTTATTCCCAGTGGAAGAGAAATCAGCATTGAACATTATGAGT
CAGTTTCACACAGAAAACTTGACTGTTTACAAGAAAAACAAAGAGGAATT
CAATATGGAGGCTCTCCTTGATGATAACGATACTGACATCCCAGAGGTTG
CAAGTCCTATTGATTTCAATCTATATTATCGATTTTGGTTCCTTCAGGAT
TTTTTCAGGCAGCCTAACCAATGCTTCAAACCAGAGGGATGGAAAAAGTT
CAAGAACTATGTTACTGAAGTAAGTATGGTCTAGGTTACCTAGTATAGCA
ACAGTTATAGGACTTTTAACCCTTCACGTATCTTGGAGGCACAAAGCCCC
CTCCTCTCCCTTGATTGAAAAATTTTTATTGGACTTATATTGTTTCGTGA
AATTTGAACAGTGTGGATGATGGATGACCAAAAATTTCGCAAATCATCTT
TATTTAGCAATATCTATTACTGGTCAAATTTCCAACTTTATTGCACAACT
TTAATCTTGAGATAAGAGGAGGGGGAGGGGTCTCATTTTAGGCTCTTTGA
GATATTTTGCATAAAAAGTTAAGGAATAGATGCCTAAAGGGATAAAGAGT
CAGAGAAGAATTTTTAAATAGCTTGACAGTAATTTTGAGAAAAGATCAAA
GCGGTGCACCAACCTGGGCAGATTCTCTTGAGTGAATGCGTGTCATGCGC
AGAATATCAGAATCTGTTCCGAGATTATAAGTGCTTGAAAGCTTATCTGC
TTTGAGTGTTTTTAAATGGCAGTTTAACCAAACTCCTGCAGCTCAAAGTA
TTGTAGGCTAATTTCTTGTTTGTCTTTTTAGCATTTTCAACTGTTATCAT
ACTTTTTGAATTTTAGATTCTGAATGTGTTTGAGAACTACAAGATCGAAT
ACAACGAAAAGAAACGCAGCAAAGGAGGATCCAATGCAGTTGACGACGTT
ACATTTGCTGACATTATGAGCACAAGCGGGAACGCAGATTATTTCCCTAA
ATATCTTACCAACGAAAAGTTGTTGGACCTTCAAATCAATGATAGTAATT
TTCGTCGATATTTCCTTGTCCAAATCTTGATTTTGTGTCAGTATTTGACA
GGCGAGGTTAAGTTTAAAACACAAGCCAATTATAAACTGCTTGAGAAACA
ATCACTCTGGGTTCACGAGTTGGTTGATCGTGTTTATGGCATTATAAACG
ATACACCTCCAAAAGGAAAGAAATTTGCAAACGTCGTCCGACACGTGTTA
ACTCGTGAGGAGAACTGGATTTCTTGGAAGAACGAAGGCTGCCAATCCTT
TGCCAAAGCTGAACAGAAGCTGACTGCACCAAAGCCTCAGGTCCGAGAGG
TGATGAGAGGGAAACGAATGGTCAAGACACGAGGTGTGAAGAGAAGTGTA
GGAGATGAATTCTTAAATAACACAAAGAAAAAGATCAATCTTGGTACACC
TGAACTCACCAAATTATGGAACCTCTGTCCAGGTAAGTTTGAAATTTTTT
AAAGCGGTTAAAAACTTTTAGCTTGACCACTATATCTTTAAGTAAGATTT
TTCTGTTAAAACCTGGTGGTCATGGCTAAGTTTTGAGATTACTGTCTATA
TCCAATGAGGCTTTACTCCAAATTAATATCAAGCCTGATGGACAGCTTCT
ATTTCGAATACTTAGTCATCTTTTGTTTCTCATTTGTCAGATAACATGGA
GGCATGCAAAGCAGAGAGTAGATTGAAATTCCTTCCACAGCTGGAACCTT
TCTTCGAGGAAGCAGTTGAACAAGCAGATCCAGAAGCCGGTATAGAGGAC
GAATACAAGATCGTGAATAAACCAAACTTCCAATGGAAAGCACTTCGTCT
GTTAGCACGCAGAAGTCATCATTTCTTCACACCTTCCACGACTCCTTTCA
AAGCACTCCCCGCATACTTAACCAGTGTCATTGAGCAGTTAGGCAAAGAA
TTCAATAAAACTGCACAGAATGCTGTTTCTTTGAACGAGACAGCTGAAAC
CACCGTAAAACAGGAATTGACTGTATAA Coding sequence (CDS) from alignment at sc0000002_pilon:3416216..3418793- >XLOC_044931 ID=XLOC_044931|Name=XLOC_044931|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3546bp|location=Sequence derived from alignment at sc0000002_pilon:3416216..3418793- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAGTGGAATAAATTTTGTGGAGACGGTTGAAAAATTTCTGTCAGC
AATTCGTTCGATAGCTAACGATGATTGTGATAAGGTCATAGAGGAAACGT
GGAATGATTGCACTGGTGGTGATGCAGATAAAAAATCAGCGTTAGATCAA
GCTTTCCGACAATTCATTGCTGGTAAGATAACAGATAGTTGTGTTGTTGT
CGGCCATCAAAACGAAGATGGCACAGACATGGAAATTGTCAAGAATGGAG
ATACATCATTTGAGAAAATCACATTGTTCCAAAATTCATTGAATATGATT
ATTCTCCACGCTCAACAAAACAAGTGCACATCCTACCTTCCAATCACATT
GATGAGTGATATTTTTGATGCCTTAACATTGACTGAATGTGAAAAACTTT
TCAATTTTGTAGAGGACAATGTTAAGATATGGACAGCTGAACCTTTTTTC
AAACTTGGTAAAAATCACCTATTGCGCATGTGCAATGATATCCTTCGAAG
ACTTTCAAAATCTCTGAACACTATCTTTTGTGGTCGCATTCAACTGTTCT
TAGCTTGTTTATTCCCAGTGGAAGAGAAATCAGCATTGAACATTATGAGT
CAGTTTCACACAGAAAACTTGACTGTTTACAAGAAAAACAAAGAGGAATT
CAATATGGAGGCTCTCCTTGATGATAACGATACTGACATCCCAGAGGTTG
CAAGTCCTATTGATTTCAATCTATATTATCGATTTTGGTTCCTTCAGGAT
TTTTTCAGGCAGCCTAACCAATGCTTCAAACCAGAGGGATGGAAAAAGTT
CAAGAACTATGTTACTGAAATGGCAAGTGGAATAAATTTTGTGGAGACGG
TTGAAAAATTTCTGTCAGCAATTCGTTCGATAGCTAACGATGATTGTGAT
AAGGTCATAGAGGAAACGTGGAATGATTGCACTGGTGGTGATGCAGATAA
AAAATCAGCGTTAGATCAAGCTTTCCGACAATTCATTGCTGGTAAGATAA
CAGATAGTTGTGTTGTTGTCGGCCATCAAAACGAAGATGGCACAGACATG
GAAATTGTCAAGAATGGAGATACATCATTTGAGAAAATCACATTGTTCCA
AAATTCATTGAATATGATTATTCTCCACGCTCAACAAAACAAGTGCACAT
CCTACCTTCCAATCACATTGATGAGTGATATTTTTGATGCCTTAACATTG
ACTGAATGTGAAAAACTTTTCAATTTTGTAGAGGACAATGTTAAGATATG
GACAGCTGAACCTTTTTTCAAACTTGGTAAAAATCACCTATTGCGCATGT
GCAATGATATCCTTCGAAGACTTTCAAAATCTCTGAACACTATCTTTTGT
GGTCGCATTCAACTGTTCTTAGCTTGTTTATTCCCAGTGGAAGAGAAATC
AGCATTGAACATTATGAGTCAGTTTCACACAGAAAACTTGACTGTTTACA
AGAAAAACAAAGAGGAATTCAATATGGAGGCTCTCCTTGATGATAACGAT
ACTGACATCCCAGAGGTTGCAAGTCCTATTGATTTCAATCTATATTATCG
ATTTTGGTTCCTTCAGGATTTTTTCAGGCAGCCTAACCAATGCTTCAAAC
CAGAGGGATGGAAAAAGTTCAAGAACTATGTTACTGAAATTCTGAATGTG
TTTGAGAACTACAAGATCGAATACAACGAAAAGAAACGCAGCAAAGGAGG
ATCCAATGCAGTTGACGACGTTACATTTGCTGACATTATGAGCACAAGCG
GGAACGCAGATTATTTCCCTAAATATCTTACCAACGAAAAGTTGTTGGAC
CTTCAAATCAATGATAGTAATTTTCGTCGATATTTCCTTGTCCAAATCTT
GATTTTGTGTCAGTATTTGACAGGCGAGGTTAAGTTTAAAACACAAGCCA
ATTATAAACTGCTTGAGAAACAATCACTCTGGGTTCACGAGTTGGTTGAT
CGTGTTTATGGCATTATAAACGATACACCTCCAAAAGGAAAGAAATTTGC
AAACGTCGTCCGACACGTGTTAACTCGTGAGGAGAACTGGATTTCTTGGA
AGAACGAAGGCTGCCAATCCTTTGCCAAAGCTGAACAGAAGCTGACTGCA
CCAAAGCCTCAGGTCCGAGAGGTGATGAGAGGGAAACGAATGGTCAAGAC
ACGAGGTGTGAAGAGAAGTGTAGGAGATGAATTCTTAAATAACACAAAGA
AAAAGATCAATCTTGGTACACCTGAACTCACCAAATTATGGAACCTCTGT
CCAGATTCTGAATGTGTTTGAGAACTACAAGATCGAATACAACGAAAAGA
AACGCAGCAAAGGAGGATCCAATGCAGTTGACGACGTTACATTTGCTGAC
ATTATGAGCACAAGCGGGAACGCAGATTATTTCCCTAAATATCTTACCAA
CGAAAAGTTGTTGGACCTTCAAATCAATGATAGTAATTTTCGTCGATATT
TCCTTGTCCAAATCTTGATTTTGTGTCAGTATTTGACAGGCGAGGTTAAG
TTTAAAACACAAGCCAATTATAAACTGCTTGAGAAACAATCACTCTGGGT
TCACGAGTTGGTTGATCGTGTTTATGGCATTATAAACGATACACCTCCAA
AAGGAAAGAAATTTGCAAACGTCGTCCGACACGTGTTAACTCGTGAGGAG
AACTGGATTTCTTGGAAGAACGAAGGCTGCCAATCCTTTGCCAAAGCTGA
ACAGAAGCTGACTGCACCAAAGCCTCAGGTCCGAGAGGTGATGAGAGGGA
AACGAATGGTCAAGACACGAGGTGTGAAGAGAAGTGTAGGAGATGAATTC
TTAAATAACACAAAGAAAAAGATCAATCTTGGTACACCTGAACTCACCAA
ATTATGGAACCTCTGTCCAGATAACATGGAGGCATGCAAAGCAGAGAGTA
GATTGAAATTCCTTCCACAGCTGGAACCTTTCTTCGAGGAAGCAGTTGAA
CAAGCAGATCCAGAAGCCGGTATAGAGGACGAATACAAGATCGTGAATAA
ACCAAACTTCCAATGGAAAGCACTTCGTCTGTTAGCACGCAGAAGTCATC
ATTTCTTCACACCTTCCACGACTCCTTTCAAAGCACTCCCCGCATACTTA
ACCAGTGTCATTGAGCAGTTAGGCAAAGAATTCAATAAAACTGCACAGAA
TGCTGTTTCTTTGAACGAGACAGCTGAAACCACCGTAAAACAGGAATTGA
CTGTATAAATAACATGGAGGCATGCAAAGCAGAGAGTAGATTGAAATTCC
TTCCACAGCTGGAACCTTTCTTCGAGGAAGCAGTTGAACAAGCAGATCCA
GAAGCCGGTATAGAGGACGAATACAAGATCGTGAATAAACCAAACTTCCA
ATGGAAAGCACTTCGTCTGTTAGCACGCAGAAGTCATCATTTCTTCACAC
CTTCCACGACTCCTTTCAAAGCACTCCCCGCATACTTAACCAGTGTCATT
GAGCAGTTAGGCAAAGAATTCAATAAAACTGCACAGAATGCTGTTTCTTT
GAACGAGACAGCTGAAACCACCGTAAAACAGGAATTGACTGTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:3416216..3418793 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1438-1773:337 |
| Aaloc | 820-1434:1163 |
| Aaloc | 1-819:2579 |
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