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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:3468881..3472353- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044930 ID=XLOC_044930|Name=XLOC_044930|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3473bp|location=Sequence derived from alignment at sc0000002_pilon:3468881..3472353- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTATCTATGAGAGTATAGTGGAAGCAAGACAAGGCGGTGGTCACCA
AGCAACAACAACAATAAAACCAAAGATGGCGGACACAATGATGTTAAATT
TCAGTAATCGATACAACAATACAAACGGGAGCACCAGTGGACAAACGCCA
AGCAAATGCAATGGTAATGGAGAATGCCATCGAAACAAATTCAGTAAATA
TGAATCTCAAGGTGGGTGGTTATACACTTCACACGCCCTTTCATAATGAA
TTGGGTGGTTAAACACTTCACACGCCCTTTTATAATTAACACCTGATATT
CATTACAGAAACACCAAAAAAATACTGGGTGTTTTCCGCTATTTCTGAAT
TTAGACGATAACACTAGTGGCAAACACCTGGGCTCCGTATAAAACAATAC
GTCATAAATATCAAGAATTAGGTGGTAAAACACTTCACTCTATAAAAATG
ACCGGCTCTGACAGTTTTTAAATAATCATTGTTTTTGTATATCAATTTCT
GATTTTAATAATCAAATTCATCATCTTGATTTTTTTAGATACCATTCCTC
AAGGATCGTATAATGGTAAGTCATATCGAACTATTTTGTCAAATTTTACT
TTTGTCAAATTAATCAGATGCAAGCAGGGAAAAGTCAGATTTAGCTGCTA
AACTGCTAAACATTTTCATTTTGAGTTAAAAGGACTAAATTGATTAAAAT
TTCAATTTCGTGTAGATATTCCCTGATTTATAAGAATTAATTTTTAGATA
TCACTTATGAGATTCCGAGTCCGACTCGCGTGTCGCGCAGGAAGAAGATC
AAAGAACACACAGAGGAATTCATCGGTAACAGTACACTTCATGGTTTTCA
TTACTGCTTCGACAAGCGATATCGTTTCCGAAGAATCATCTGGATTCTTG
TGGTGATGGGTTCCATTGGAATGTTACTACAGAAATTGTTCGAAGCTGGC
CAAAAATATTTCGACCGTCCCTTCACCTCAACCAGTACCGTTATTAATCC
GGAAAAGATGAAATTCCCAGCCGTTTCTTTGTGTAATATCAATGACTTCC
GAATGTCTAAACTGGAAGGGACAACGTTCTTAAAGATCATGAAAGGTGAA
CTACATTACAGCATTTTGAGTGGACCTGATTACGCAAACGCCTCAAAACA
AGCGAACCACAGACTTCAAAACATGTTGATGGATTGCACCGTTAATTTCA
TGCAACAAAACAAATCTATAGCGAAATGTTCACCAGCAAACTTCTCTACA
TTCTATCAATCACAAGGCGAAAAATGTTTCACTATAAACTCTGGTAATGT
CAACAGTCATTTTGCAGACCTGAGCGAGGGTGGACGAAAGAAATCGTTGG
AAATGATTTTAGACTTGGAACATTATGATTATTTTGACAAAAATGATGTG
GGAGTCAGGCTTATCATTCACGATCAAGATGAAACGCCCATTCGCTTCAG
CGGTGTCGCCCTTCCACCCGGCTTCACAAGTTACGTGGAAGTTGGAAAAA
CTGAGGTAAGAAAAAACTTGACCAGAAGATGAGTGAATAAGATTTTTTAG
GAGGTTTGTAGAAAATCTTGTGCGAAAGAATCACTCTTTCTCTTTCTTTT
TTCTTCTTGAAATCTAGGAAGAAAGAAGGAGAAGAAAGAAGGAGAAAAAG
AAGGGAATAGAGAGTTTTAGTCTATAACCAAAGTACAATGAATTTAACAC
AAATCCCATCTGACCATATTCTTCTTTCTTCCAGACAATTAACTTGAAGA
AACCTTACAAAACAGCATGTGATAGCAGAAAGTTGGATTACTTTTCTGTC
TACTCTGAGAATGCTTGTTGGTTGGAAAAGTTGACCAAATTCGTCACCAA
GAAATGCCATTGCAAAGATGGTTTCATGCCAGGTGAGTGAATCAATGAAA
TCGAAAATAATTACTTCAGTTATGATTTTACACATGTTTTACCATTACAG
GACGGTAATCAATTTGATACAAAGTGCAAAGTTCAAAAATGCTAGTTATG
TCTGGCAATGTTAAGTATCTTGACAATAATAACACTTTCGAGAAAATAGG
ATAGGCTCAAATTGATTTCATGCATTCCAAAAAATGGGGCAATATAATAA
ATCTTAAAACTACGGCTAGATAATTACTCGGATCAGCTTCTTCAAAATGT
AGATTTTGAAATGTGAAATTTGATCTTCTCATTTTTCTTTAACAGGAACA
GAAAGAGTGTGTTCGGTCTCAGAATTGTTCAACTGCACCTGGCCAAATTG
GGGTAAGTGAATGATTTTTTTTTGGAGTAGAAGAATGGTACAAGAGAGAC
ACCAATGTGAAGGGTGTGTAAAGGGTATGTAAACAGTGAAAATCTACCTT
ATTGGAAATAATTTTCGTGGGAACTAATGTTTGCGGTCGAAAAAAAAATA
GGAAAAATAGCATTTTGCGGGTTTCAATTTTCGCGGTTTTGCCTTTTTTG
GACGAATTTCCTTTATTTTCCCAGGAATTTATCAAATTTTTCGATAAAGT
TGGAATACATTGGAAAAAATTGTATTTCACCGGTTCAAATTTTCGCGGTT
TTGCCAAAAAACCACAAAAACGCTAAAATTAATTCCCGCGAAAATAAGTT
CCAATAAGGGAATAGTTTAGCCAATCAAAACTTAATTAATGACGACTGTC
ACAGGGAAACTGACTCTCTGATAAGAATAAATTCGATCCAACATGACAGA
ACTATCATTTCATTTTACAGAGGCTTTCAAGAGCATTCCCAAAGAAGAGG
TCGACTGTCCTGTAGCCTGCAAAGTCACTGATTTCAACACCTTGATTTCG
TACGCTCAATTCCCTTCGAACCGCATTGCTGACATATATGCAGAACAAAA
ATTCAAGTTGAAAGGAACAACCATGGAGAAACGAAAATTCGTCAGGTAAG
ACATCAAAGCTCTTTTTTCAAAAAAAGAAGCGGCTTCCATTTTTCATAGG
ATTATATGGTTATGAGTACAATGTTCCTTCGCTTTGTAGAGCACTCTTAA
AGCATCACTTATAATCGTCTACACATATCCTTTATTTTGAAATTTAACAT
TCGAATTTCCTTACTGCAGAGACAACCTGCTTCGAATTGTGATTTACTAC
GAGAAGATGACATACAAAAGAATCACTCAAGCGCCAAGTTATGATACAAT
GATATTGTTAGGTAAGTTCTATAGAGAATAGCAAAAAAAATATAAAGAAA
TGCCTCATGTTTAAGATTCAGAAATTTTCAAAGGATTCTTTAAAATGGGC
TGGTAAAAACGGAAACTTTTACATTTCACTCAACATTCTGAAGAAATATA
AACTTTCAGAAAGTCCTAAAAGATCAGTATTACTTCATCTTTTATTTTCA
GGGGACATCGGTGGCCAGTTGGGCTTGTTTCTTGGCACCAGTATTTTGAC
TTACCTGGAGTTCTTCGATTTCTTAGCCATGATAATCTACACAAAGTACT
TTGAAATTTATAAAATCAAGTAA Coding sequence (CDS) from alignment at sc0000002_pilon:3468881..3472353- >XLOC_044930 ID=XLOC_044930|Name=XLOC_044930|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3180bp|location=Sequence derived from alignment at sc0000002_pilon:3468881..3472353- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTATCTATGAGAGTATAGTGGAAGCAAGACAAGGCGGTGGTCACCA
AGCAACAACAACAATAAAACCAAAGATGGCGGACACAATGATGTTAAATT
TCAGTAATCGATACAACAATACAAACGGGAGCACCAGTGGACAAACGCCA
AGCAAATGCAATGGTAATGGAGAATGCCATCGAAACAAATTCAGTAAATA
TGAATCTCAAGATGAGTATCTATGAGAGTATAGTGGAAGCAAGACAAGGC
GGTGGTCACCAAGCAACAACAACAATAAAACCAAAGATGGCGGACACAAT
GATGTTAAATTTCAGTAATCGATACAACAATACAAACGGGAGCACCAGTG
GACAAACGCCAAGCAAATGCAATGGTAATGGAGAATGCCATCGAAACAAA
TTCAGTAAATATGAATCTCAAGATACCATTCCTCAAGGATCGTATAATGA
TACCATTCCTCAAGGATCGTATAATGATATCACTTATGAGATTCCGAGTC
CGACTCGCGTGTCGCGCAGGAAGAAGATCAAAGAACACACAGAGGAATTC
ATCGGTAACAGTACACTTCATGGTTTTCATTACTGCTTCGACAAGCGATA
TCGTTTCCGAAGAATCATCTGGATTCTTGTGGTGATGGGTTCCATTGGAA
TGTTACTACAGAAATTGTTCGAAGCTGGCCAAAAATATTTCGACCGTCCC
TTCACCTCAACCAGTACCGTTATTAATCCGGAAAAGATGAAATTCCCAGC
CGTTTCTTTGTGTAATATCAATGACTTCCGAATGTCTAAACTGGAAGGGA
CAACGTTCTTAAAGATCATGAAAGGTGAACTACATTACAGCATTTTGAGT
GGACCTGATTACGCAAACGCCTCAAAACAAGCGAACCACAGACTTCAAAA
CATGTTGATGGATTGCACCGTTAATTTCATGCAACAAAACAAATCTATAG
CGAAATGTTCACCAGCAAACTTCTCTACATTCTATCAATCACAAGGCGAA
AAATGTTTCACTATAAACTCTGGTAATGTCAACAGTCATTTTGCAGACCT
GAGCGAGGGTGGACGAAAGAAATCGTTGGAAATGATTTTAGACTTGGAAC
ATTATGATTATTTTGACAAAAATGATGTGGGAGTCAGGCTTATCATTCAC
GATCAAGATGAAACGCCCATTCGCTTCAGCGGTGTCGCCCTTCCACCCGG
CTTCACAAGTTACGTGGAAGTTGGAAAAACTGAGATATCACTTATGAGAT
TCCGAGTCCGACTCGCGTGTCGCGCAGGAAGAAGATCAAAGAACACACAG
AGGAATTCATCGGTAACAGTACACTTCATGGTTTTCATTACTGCTTCGAC
AAGCGATATCGTTTCCGAAGAATCATCTGGATTCTTGTGGTGATGGGTTC
CATTGGAATGTTACTACAGAAATTGTTCGAAGCTGGCCAAAAATATTTCG
ACCGTCCCTTCACCTCAACCAGTACCGTTATTAATCCGGAAAAGATGAAA
TTCCCAGCCGTTTCTTTGTGTAATATCAATGACTTCCGAATGTCTAAACT
GGAAGGGACAACGTTCTTAAAGATCATGAAAGGTGAACTACATTACAGCA
TTTTGAGTGGACCTGATTACGCAAACGCCTCAAAACAAGCGAACCACAGA
CTTCAAAACATGTTGATGGATTGCACCGTTAATTTCATGCAACAAAACAA
ATCTATAGCGAAATGTTCACCAGCAAACTTCTCTACATTCTATCAATCAC
AAGGCGAAAAATGTTTCACTATAAACTCTGGTAATGTCAACAGTCATTTT
GCAGACCTGAGCGAGGGTGGACGAAAGAAATCGTTGGAAATGATTTTAGA
CTTGGAACATTATGATTATTTTGACAAAAATGATGTGGGAGTCAGGCTTA
TCATTCACGATCAAGATGAAACGCCCATTCGCTTCAGCGGTGTCGCCCTT
CCACCCGGCTTCACAAGTTACGTGGAAGTTGGAAAAACTGAGACAATTAA
CTTGAAGAAACCTTACAAAACAGCATGTGATAGCAGAAAGTTGGATTACT
TTTCTGTCTACTCTGAGAATGCTTGTTGGTTGGAAAAGTTGACCAAATTC
GTCACCAAGAAATGCCATTGCAAAGATGGTTTCATGCCAGACAATTAACT
TGAAGAAACCTTACAAAACAGCATGTGATAGCAGAAAGTTGGATTACTTT
TCTGTCTACTCTGAGAATGCTTGTTGGTTGGAAAAGTTGACCAAATTCGT
CACCAAGAAATGCCATTGCAAAGATGGTTTCATGCCAGGAACAGAAAGAG
TGTGTTCGGTCTCAGAATTGTTCAACTGCACCTGGCCAAATTGGGGAACA
GAAAGAGTGTGTTCGGTCTCAGAATTGTTCAACTGCACCTGGCCAAATTG
GGAGGCTTTCAAGAGCATTCCCAAAGAAGAGGTCGACTGTCCTGTAGCCT
GCAAAGTCACTGATTTCAACACCTTGATTTCGTACGCTCAATTCCCTTCG
AACCGCATTGCTGACATATATGCAGAACAAAAATTCAAGTTGAAAGGAAC
AACCATGGAGAAACGAAAATTCGTCAGAGGCTTTCAAGAGCATTCCCAAA
GAAGAGGTCGACTGTCCTGTAGCCTGCAAAGTCACTGATTTCAACACCTT
GATTTCGTACGCTCAATTCCCTTCGAACCGCATTGCTGACATATATGCAG
AACAAAAATTCAAGTTGAAAGGAACAACCATGGAGAAACGAAAATTCGTC
AGAGACAACCTGCTTCGAATTGTGATTTACTACGAGAAGATGACATACAA
AAGAATCACTCAAGCGCCAAGTTATGATACAATGATATTGTTAGAGACAA
CCTGCTTCGAATTGTGATTTACTACGAGAAGATGACATACAAAAGAATCA
CTCAAGCGCCAAGTTATGATACAATGATATTGTTAGGGGACATCGGTGGC
CAGTTGGGCTTGTTTCTTGGCACCAGTATTTTGACTTACCTGGAGTTCTT
CGATTTCTTAGCCATGATAATCTACACAAAGTACTTTGAAATTTATAAAA
TCAAGTAAGGGACATCGGTGGCCAGTTGGGCTTGTTTCTTGGCACCAGTA
TTTTGACTTACCTGGAGTTCTTCGATTTCTTAGCCATGATAATCTACACA
AAGTACTTTGAAATTTATAAAATCAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:3468881..3472353 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1471-1590:121 |
| Aaloc | 1378-1467:404 |
| Aaloc | 1204-1374:752 |
| Aaloc | 1147-1200:1277 |
| Aaloc | 997-1143:1740 |
| Aaloc | 241-996:2725 |
| Aaloc | 214-237:2934 |
| Aaloc | 1-210:3474 |
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