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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:3578888..3582581- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044926 ID=XLOC_044926|Name=XLOC_044926|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3694bp|location=Sequence derived from alignment at sc0000002_pilon:3578888..3582581- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAGGCGGGCGAGAAAGCACTTCCACCTGCTGACGATAACGCCGTCCA
CGAATATCTCTCCATCAAAGCTTACCTGGTACGAGTTGAATGAAGTCTTT
ATTTTTTGCATCAAATCCTGGAAAAGAGAGGAGAGGAGATATGGCTTTAT
GCTACAGAAAGACTTGAATATCGTTTTCTTTCTTAACAATTTTATGAACT
TGGTATAAGTAAAAAAATAATCACGAATTTGATGTTTGGCTTTCTAGTGA
ATGTTTTCATGTAATAAATCCTTATTTCGAAGTGAACAACTAAGGATTGG
AGAGGTACATTGCAGCTTTGTTTCCGAAAGGAACTTTTTAGTTTTTAGCG
AAAGTTTTGTGGTACACTGTAATCATTTGAATTAGATTTGCTATTTTCGC
GTTTATCTCGATTTCAACTGCTAAGTGATATCGAAAATATATCAATGACC
TGGAATTATTCTTACTTTTTCCTAGAGTGCACACGACGCGTTCAATGCTT
GGTTCGATCATTACCATAACAAAGCACCGGTAGGCTGTATTTTAGAAATA
GATTGTGTTTCTCGTTAATAATCTTCATGGTATTGATGTACTACTAACTG
CATCAGTAAAAGCATATAGTCTTTATAAAAAACCCTGGTCTGGAAGCTTA
TTGTTTTAACTTTTTGTTAGCTTTTTCTTTTGTTATTATCAAAGGAAAAT
TGATTTACTCAGTTTTTGATCACGTTACCAAGTACTCCTCTTGGGATTGG
TTTAAGATTTAATCATAACAAAATCACATGATCAAAAAGTGAGCAAACTA
AACTTTAACGCAAATTCAAGTAAGAAACAAAGGAAAGAAACAATGGAAAG
AAACAAAAGGCTTCCAGACCGGGTTTTTTATACGCACTATGGTAAAAGGC
ATATCGGAAGCCCTACTAGTCGTTTTAATTTTTGAAAAAGGTATATTGGA
TTAAAACACATCCTAGACAATGCAATTTTTTAAAGATTTTCTTTTAAAAA
ACTTTTTGATAGAAGGTAAGGGAGAAAAAAAGAGTCTGCTTTTTGAGTCC
TGAACATTCTTTTTGTTTTTCTACAGGTGAAACCAAAGGACAGCGGTGTT
GGCAAACGAACTTTCAAAGAGAAAATCGCATACGATGAAGCTGTGAAAGA
ATATACTGTAAGCATGTCAACTATCTAACTGATAATACGATTAAAAGGAG
TTACAAATTGTGCGATACATGATCTAATCCGACGTTCTACTATACAAAAC
GCTCCATTATTCAATAATTTTGAAAGTTAACGTTAACAAGGAACTTTCAT
GAACCACGCTCTAGTCCATAAGCTCCCTTATTCGATGAAAATCCGATTCC
CCTTGAAAATCGAATTAGAGCGATAATTGTATTTGTCAACAGCGGCTATG
TTATAACAGTATTGTTTTTGCATTCACTTCACTTTTAGGTTGAATGTGAA
AGGTGGCAAAAATCACTGGAAATTCACATCAATGTAAGCTAATCTTTTTT
CTTTATTACCTTACGCTTGAAACCCTTCGATACTCAGTATAATTTTTTTC
ACCTTCCAGTCCAGTTTAAACACGGGGCTTTGCTTTTTTCGCAAAGACAT
CGTATGGTACTCTCTACTTGATGCTCAGAAATTAAGGATTATGGAGCAAA
TCCATTAAGAAAGAGTGACACCCTCCCCTAGATAGCTTTCGAAAGAGGAG
CCTTCAAATCATCCCCTACAGCGAGCGCAGACTTCCTTAATTCTTTACAG
GCACCAAATTTACGTTCAAAAACTTTGTATCCCTACAACATAGATTAGTC
AATACCGTTCTAATTACTTTTGTTTCCATTTTTTTGTAGGCCACGTCAGA
AGCGGTATATAACGTCTTCTTATTTCCTGGTGGATGGCTTGTCGACCAAA
GAAAGGTATGTACTGTTCCTTCTCCACGTGGCTTTTCATTTTCAATGTAA
TGTGATCACAAGTTTATGTAGCATTTCTACTCATGTGAAAAGTTTTGTTG
ACTCTGGTTGATTTTCTAGATACTCTCAATGTGGGGGTAGTGGCCCTTAT
CCAATCTTCAGATTTTTTTAGAGGCAGAACTGAACATCTGACGACCTCAG
TATGGTTGACTTTTATGGCCGAGAGATATACATTGTTTTACAACTATTTC
TGTACAGGAAACGAATACTGACGGCGATCGTCAAGAGCAGATTTCTTTAT
TGCGACAGTTATGCATTCCTTATCTTACACTTCTTCTTCATAAAGTCCTA
TCCTCCAACAAACAACATCGACAGGTATTAAATAAATGGCCTTTAAATTA
ATACGTTTATAACTTAATTTACGAATCACTTGTTTATCGTTTTCACAACA
CGGCTGGTTGAAATTAAAGGTGGCTTAACATGAATTTTTCCCGTTCGTAC
TAATTACATGTCTCGTTATTATGATATGCTTAATTTGCTGTTCCCTTTTC
TTTTCTGAGGTTTTCTACCTAAATTTAATGTTAGTTTTGCACCTCTTCAA
GGTTAATTGTGAGTCTCATAGCCTTGTAAACCCAACGCACATCCCTTCTC
ACAGACCCGGTAGGATTTTATCAGCCAGTGGGGGTAAAAGAACGGACTGA
AACTCAGTGTGGATTGATATTCCCATATTTTTTATGTTATCATCTCTCTC
TTCCTACCTAGTGTTTCCAATTGGCTGAAATTATCCAATCGTCAAAATAT
CGTCTTTACGAGGTAAGCATTTCTTTATTGCCTATTCAACCCTTTTACAG
GAAAATCGGTAACGAACAGAAATCGTTAATCTTCTTACTACATTGGGCTT
TTCCAGAAAAAAATTGAATATGGGGGTGGAGGATATAACAATTTTCAGTG
ATTTACCCCCCCCCCCCCCGGATAAGAATCAGTTGACCCCCCGGACAACC
CAAATTACCCCCCAGACAGAGCAAATTTTCCCCATGGACAAGACAAATTT
GAAAAGTTGAAGTTGGTCCATATTTCTTTTTTGGACCTTTTTCAGTGATC
AAAGTTCTTCCGTTTCACACGGATTTCCGTCTCACAGAAATTGTTGTCAA
AGTTTTCCGCCTCAGTTAGAAATGGTTATTTAGCAAGAAATAGTGATTTT
AATCTCTGGAATAATTCCATCAGAAAGAAATCTCGTATTAAAACTGTGTT
TATGATGGCTGATGGCCTTGTATATACATAGTATGACGTTCATATATTTT
TATTTTTCAACCTATTTTAGAAAGATATATATTTTCGCTGCATGATAGGT
ATTTTAAGAACATTCTGTGTTATTATAATTAACAAATTTTAGTGCCTTTA
TAGCCAATCTAGGGGGTAAAAAATCTGAACATTTTCTGGCCCTCCGCCCC
AACCATAGTGGGGCCTGCGGGTGTTACTGTATAGTACCAAAATATCTCTA
TCGACAAATTTTCCGTCTCACAGAAAAAAGCTGCTTTGACCACTGCTTTT
TGATTGAGCATAATTATTGATGAATGCGAAGCAACAGTAATGAGACTTTC
CTTAGTGTGGTTTTAAACGATTTTGACTCATAATTACTCTAGGGTATAAT
TTCTTCTTATTTCAGCTTTTCCAAAAGGAAGAATTACGAAGATTTTTACA
TTTGATCAGAGAGTCAGCAATCAGTTTGTTGGATGCAGGAAGTGAACCTT
TTGGTTATGAGTCACTTCATGTCTATAAAATGGATCGATCGTAA Coding sequence (CDS) from alignment at sc0000002_pilon:3578888..3582581- >XLOC_044926 ID=XLOC_044926|Name=XLOC_044926|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1242bp|location=Sequence derived from alignment at sc0000002_pilon:3578888..3582581- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAGGCGGGCGAGAAAGCACTTCCACCTGCTGACGATAACGCCGTCCA
CGAATATCTCTCCATCAAAGCTTACCTGTTTCAGGCGGGCGAGAAAGCAC
TTCCACCTGCTGACGATAACGCCGTCCACGAATATCTCTCCATCAAAGCT
TACCTGAGTGCACACGACGCGTTCAATGCTTGGTTCGATCATTACCATAA
CAAAGCACCGAGTGCACACGACGCGTTCAATGCTTGGTTCGATCATTACC
ATAACAAAGCACCGGTGAAACCAAAGGACAGCGGTGTTGGCAAACGAACT
TTCAAAGAGAAAATCGCATACGATGAAGCTGTGAAAGAATATACTGTGAA
ACCAAAGGACAGCGGTGTTGGCAAACGAACTTTCAAAGAGAAAATCGCAT
ACGATGAAGCTGTGAAAGAATATACTGTTGAATGTGAAAGGTGGCAAAAA
TCACTGGAAATTCACATCAATGTTGAATGTGAAAGGTGGCAAAAATCACT
GGAAATTCACATCAATGCCACGTCAGAAGCGGTATATAACGTCTTCTTAT
TTCCTGGTGGATGGCTTGTCGACCAAAGAAAGGCCACGTCAGAAGCGGTA
TATAACGTCTTCTTATTTCCTGGTGGATGGCTTGTCGACCAAAGAAAGGA
AACGAATACTGACGGCGATCGTCAAGAGCAGATTTCTTTATTGCGACAGT
TATGCATTCCTTATCTTACACTTCTTCTTCATAAAGTCCTATCCTCCAAC
AAACAACATCGACAGGAAACGAATACTGACGGCGATCGTCAAGAGCAGAT
TTCTTTATTGCGACAGTTATGCATTCCTTATCTTACACTTCTTCTTCATA
AAGTCCTATCCTCCAACAAACAACATCGACAGTGTTTCCAATTGGCTGAA
ATTATCCAATCGTCAAAATATCGTCTTTACGAGTGTTTCCAATTGGCTGA
AATTATCCAATCGTCAAAATATCGTCTTTACGAGCTTTTCCAAAAGGAAG
AATTACGAAGATTTTTACATTTGATCAGAGAGTCAGCAATCAGTTTGTTG
GATGCAGGAAGTGAACCTTTTGGTTATGAGTCACTTCATGTCTATAAAAT
GGATCGATCGTAACTTTTCCAAAAGGAAGAATTACGAAGATTTTTACATT
TGATCAGAGAGTCAGCAATCAGTTTGTTGGATGCAGGAAGTGAACCTTTT
GGTTATGAGTCACTTCATGTCTATAAAATGGATCGATCGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:3578888..3582581 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 493-621:130 |
| Aaloc | 442-492:1034 |
| Aaloc | 325-441:1538 |
| Aaloc | 259-324:1856 |
| Aaloc | 214-258:2257 |
| Aaloc | 133-213:2619 |
| Aaloc | 79-132:3220 |
| Aaloc | 1-78:3695 |
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