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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1537049..1541932+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044908 ID=XLOC_044908|Name=XLOC_044908|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4884bp|location=Sequence derived from alignment at sc0000007_pilon:1537049..1541932+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATATCTTTAAATAAACGAATGATAGCTTTTATAGCCTTTTGTTTGCT
GATAGTTGTGTATTTCTTGAGAGGAAAAGATGGCAATGGGACTGGTAGTA
TAGTGGATAGAATTGTTTTTATGGACAAAAACAAAGATGGTGAAAAACAC
TCTAAAACtataagaaataagcccaaaatTGTATCTGGTGATATACAatg
taaaaatctgaaaatcaatCCATTTGCTGATGAAATGATGAATCTAATGA
AGGACTTTGGTAAACACGAATGCGACCCGCCAAATGAATTGACTACTGAG
AGGAAAGGCAGTACGCTATCAGTAACAGCTTATAAATTGAATTTCATCAG
CACTACAGAAGTGATTAAAGAAGGGAAGTCTTTTAAATTGGGCGATAAGA
AAACAATGACCAAGCCCAAATCAAATCCAGTTATTCAAGCAGGTATGTCA
ATTTATTAAAGCCAGTCTCCAATTCATATTTCGAGGTTTAGTTCGATCTA
AGAGTtagtttattttgaagactgttTTACATTTATCAAACGTTTACCAT
TATACTTTAGGcttacaaactttcgcgagaataaactttcgcaagtcaag
aaatgaaaatgttCACAAGAAAAATGGCTTAGATTGACAAGTACTTTTTG
AATTGGAttgaaacttgttttttgacATTGTGACTTATTGTACTTTtaca
ggctaaaaagtgccataaagcgtacattttaatttcattttaagtTAGCA
ggtttacagattttctatttcgtcaagaatttttctttgGCAAAAAGTTT
TGCGAATGACCCTTTCAAGAATTGTCTGTGTTTTTACTattcaggaaatt
ttggttcACTACGAAATTCTGGTAGTAAGTTATGCGTGGTTCCAACAAAG
GAACAGGAATCTTCAGACTACAGCACTATCACCTTCACATCAGAATGTAA
TTCTAAGCAAGGTGTTTTCGAATTTACTAAGGAAGGCTTTATCAAAGAAA
AGGTTAgttcttttaagtttttttttattaatcttatttatttagtttat
tcaatttatacttttttttgaaagcaATCTAGAGTCTTAGTTTAATTTTT
ATCAATTCCTGTTTGGCAGGCAACCCATAGCCATAATTACTGGGTGTGTC
AgcaataagttaccctctttgatttgatattacAGGCAGTAGTAGAAATA
TCTTTCAGAGAAAAGCCTAAAATTTTCTTAGTTCTTCTTACCCTCAAATC
AAAGCAGATCAAAGAGGTAACTTATTTCTGGCACACCCAGTAGGTATATA
ATTAGAACGTTATCAGTGTGTCCAAAAAGGTGTACCAGCAATAAAGCCTT
TTTGTTTCAGTGTCTTCCCTTACAAGTATGATGATAATGATCCTGAATAT
TATTGAGCCATTCCGctttatatccatacatgggGGTGGACAAAGATTTC
CAGGGGAATATCGGAGAGAAGAATTTCCAAGGGGTATAATggagtatttt
ttaatttttccagataaaagtttaatACTAAATTTCCAGGGGGTAAAAGA
CTGATTTTAGTTCGTCCACCTTCACTTTTAGGGTATTGAAAAAAGATTTC
CAAGGGTTCTTTCGGAAATGTTATCATTATTAACAAGGTTCTTCTTTTTT
ATCTCGAAAAGgttgatgaaaatttgataaaacagTCCATTAGATTTTTA
CTTAATTATCACTCTTTTTTCATGGttttaattcaatttgtttTCCTTAT
AAAGGCTGATACAAAAAGATGTTTCGGTTTGAAGCCAAACACCCAGTTGA
AGAACGATGCAATAGTTGTCCTCACTAAAGACTGTGGCATGAAGTTTGAA
ATCGTACACGGTGGTGTATTGAAGACAACTGATTTTTGTATTCACCCCTT
GGGCGGAGGAGGCTCATCTGAGGgccaaaaattgtgtttttacAAGGAAT
GTTCGGAACAGAAAAGATTGCAATATCATTTTTATAATGCGGGTAAGTTG
AGgctaatcaaaaaaaaaaaaaaaaatcaatttagaattttAGATTCTTC
AAAGAGTTTAAAATTACATAGTTTGGATAAAATTGGAGCAATTTCCCGAA
GTACCATCTGAGATTTTCTAGACTAAGCTAAGCCTATTTCCCCTGCTTCA
AATTCGAGTCCTATCTgggggggggTGCACTATAATGAAGTGCCAAGATA
TTCATAGACATTTCTTCAGACTTTTAAataaacatgaatatttttcagtg
GAAGACAAGAAAGAAACACAAGAATTTGAAATTACAAAAGAATTCAATAT
GGTTGAGTACACAACAACGGACGGTAAAACATACAATGACTTTGTAGCCT
CTGTTCCTCACAAAGAAATAAGTGGATTGAAAGCAGCGTCTGGGACACAG
CCTAATGTTTTCATTATCACCCTTGGGGAAGTATCGTCGAGTCACTTTCA
AAGGAAGCTACCAAAATCTTGGAAATATTTGCAAGATGAAATGAAGTCAA
CCAATTTTCCATTCTACGCACCAACCcatgaaaattttattcaaaatgtc
GATAATCTCATAAAAGgtattcattgtcaatatactTTTAATCCAATTAA
AACTTATTAATAATTgatttgtatatgtaatcacatgataacgagtgcaa
ttcgaatataattgcacgtgGATATttattttccgagtccgaaaggatga
ggaaaattcgaaacaaaaaaatcacgagtgcaattttcgaattgtacgag
ttatgtgattacgagctaatcgcacaatggctttcactactttttcccag
ttttagggaagtaaattacagaaattacactgagagttttatatttttct
cttctctttatgtctttcttttattgttttattgattttctttttcccaa
aatgaatttcgaatgcaattaaaatgttCGATGCAaataaaatgtaagaa
aaaaacatgaaaattaattttgtaaacattggcgcggcattggcgagtgt
gattaacgattaattgctctctacgggatgcaattaacgattaattgctc
tctttgagggcgtgccaaataagaaaaaataacccatcgtgcgattagat
ATGTAATTTAGGTTTCTGTTTTTTAGATTAAACACTTGCTTTAGACCAAT
ATTTACAGAGCTTTCTCATATCCTTTAAGGAGGTCAATTTTCACAATGAT
GATTTCGgatgattttagaaaattcacTAAACTTACTACAGCATCTATAA
GTTCTCGCTAAAAGTGAGAAAATACCCCTAAGATTTTGTGTCAAATATCA
AATAATATCCTTTGTCATGATAAGTTTGCACCAAGGATTTTGCTGATCTC
CAAAATAATTTCTCGCTCGAATTAGTTTACTAGGAGATTCTAGGTGGCTT
CTAGGAGGCATCATGTTGTCTAATTCATAACCAATagtttgttgaatatt
ttgtttttaatttgatttttaggtACTTCTCCGACAGAGAGCGCAGACGC
CAAAACATTAATATCATTGGCACGTGAGAAAAACTATCTAACACTTTTCA
GTTCAGATTCTGTCCACGAAAATTTGACGACCATTGAGGCTGACCATTCT
GCTTTATCACTCTTCCAAGCAATAGCAAAGTAAGCACAATCGTTAGTAGG
CTCCTAAATACACTCACCCTGATTATTTGACCtttttttACGCCAGGGTA
AATCTTAAAATGATACAGAATGATATTCATGATAATTTCTGTAAATTTAa
agatgttttcaattttctcattttcacaTATTGCTGgaccataaattttt
tttttacttcaatctTCACATGTATATATATTTTGAGATCCCTAAATGAT
TAAATTAGCGAGGCTAAGTATCGGTTAATCTTGCCGTTGTGAACGGGGTT
CTTTCAGTCCGTCTTTCGTACTACGCACTAATCAGGAAGCAAAGCAGACA
TGCCCGCAAtaatatcgactttgcttctaGAACGGATATTAGTAGTATCG
GTAGATAGCCACCGATACTGATTAGCCTCCGATACTGATTAGCCTCCGAT
ACTGATTAGCCTCACCATTAGCAAGTTGATATATTCGGGATAAATTGAAg
aagacggtataaagcaaagttgacatgtagccaaatcaccgtccactttg
ctcgacgaatgtaaaaataccaaaataccgtcgtcagTTTAGGTTATCAA
AGACGAATTAGAGCCGTACATcgactatcgactttgttttgtatcatttc
acttaccgtcgtcCTCGATATCTTCCAAAACCATTTAACCACACTATTAT
TGTCCCCTCGAGCGGCTTTTAAAACTATTTctttatttcatatttatagA
AACTACGACATAAGAGCGAAACACTATTGCATCGCATCTAAAGGTTTCTA
TGAACTTTCTTTCAACTATTTGAATGATTTTATCAGCACATATAAAAAAG
ACGCTAAATTTGGCATGATTGTTTTAAATGAAATGACTAGTCAGAATTAT
AACCTAATTGGATATATggacgaaaaattgaaagatattttacacAAAAT
TCATCAATTACCGAACACTGTTTTGATAGTGAATTCGATTAAAGGAACAT
TGCTTGGGAAGCTGGCACAAACCATACAAGGGCAACAAGAGCATAAACAA
CCATTTCTCAACATATATTCATCAAATGACTTGAAGGACAGATTTTCATT
GAATGTTAAAAGAACTTCACAGATTGTGTCACCTTATGATTTGCATTTTA
CAGTAAAGCATATTTTAACAGGCGATTCAACAAAGCATAAATATGGTTTA
TCGCTTTTCGGAGATAAAGACTTTGAAacgagaaaatgtcaaatagTTGG
TGTACCCTTCGAGTTGTGCCCTTGTAAGATTTGA Coding sequence (CDS) from alignment at sc0000007_pilon:1537049..1541932+ >XLOC_044908 ID=XLOC_044908|Name=XLOC_044908|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3696bp|location=Sequence derived from alignment at sc0000007_pilon:1537049..1541932+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATATCTTTAAATAAACGAATGATAGCTTTTATAGCCTTTTGTTTGCT
GATAGTTGTGTATTTCTTGAGAGGAAAAGATGGCAATGGGACTGGTAGTA
TAGTGGATAGAATTGTTTTTATGGACAAAAACAAAGATGGTGAAAAACAC
TCTAAAACtataagaaataagcccaaaatTGTATCTGGTGATATACAatg
taaaaatctgaaaatcaatCCATTTGCTGATGAAATGATGAATCTAATGA
AGGACTTTGGTAAACACGAATGCGACCCGCCAAATGAATTGACTACTGAG
AGGAAAGGCAGTACGCTATCAGTAACAGCTTATAAATTGAATTTCATCAG
CACTACAGAAGTGATTAAAGAAGGGAAGTCTTTTAAATTGGGCGATAAGA
AAACAATGACCAAGCCCAAATCAAATCCAGTTATTCAAGCAGATGATATC
TTTAAATAAACGAATGATAGCTTTTATAGCCTTTTGTTTGCTGATAGTTG
TGTATTTCTTGAGAGGAAAAGATGGCAATGGGACTGGTAGTATAGTGGAT
AGAATTGTTTTTATGGACAAAAACAAAGATGGTGAAAAACACTCTAAAAC
tataagaaataagcccaaaatTGTATCTGGTGATATACAatgtaaaaatc
tgaaaatcaatCCATTTGCTGATGAAATGATGAATCTAATGAAGGACTTT
GGTAAACACGAATGCGACCCGCCAAATGAATTGACTACTGAGAGGAAAGG
CAGTACGCTATCAGTAACAGCTTATAAATTGAATTTCATCAGCACTACAG
AAGTGATTAAAGAAGGGAAGTCTTTTAAATTGGGCGATAAGAAAACAATG
ACCAAGCCCAAATCAAATCCAGTTATTCAAGCAGgaaattttggttcACT
ACGAAATTCTGGTAGTAAGTTATGCGTGGTTCCAACAAAGGAACAGGAAT
CTTCAGACTACAGCACTATCACCTTCACATCAGAATGTAATTCTAAGCAA
GGTGTTTTCGAATTTACTAAGGAAGGCTTTATCAAAGAAAAGgaaatttt
ggttcACTACGAAATTCTGGTAGTAAGTTATGCGTGGTTCCAACAAAGGA
ACAGGAATCTTCAGACTACAGCACTATCACCTTCACATCAGAATGTAATT
CTAAGCAAGGTGTTTTCGAATTTACTAAGGAAGGCTTTATCAAAGAAAAG
GCTGATACAAAAAGATGTTTCGGTTTGAAGCCAAACACCCAGTTGAAGAA
CGATGCAATAGTTGTCCTCACTAAAGACTGTGGCATGAAGTTTGAAATCG
TACACGGTGGTGTATTGAAGACAACTGATTTTTGTATTCACCCCTTGGGC
GGAGGAGGCTCATCTGAGGgccaaaaattgtgtttttacAAGGAATGTTC
GGAACAGAAAAGATTGCAATATCATTTTTATAATGCGGGCTGATACAAAA
AGATGTTTCGGTTTGAAGCCAAACACCCAGTTGAAGAACGATGCAATAGT
TGTCCTCACTAAAGACTGTGGCATGAAGTTTGAAATCGTACACGGTGGTG
TATTGAAGACAACTGATTTTTGTATTCACCCCTTGGGCGGAGGAGGCTCA
TCTGAGGgccaaaaattgtgtttttacAAGGAATGTTCGGAACAGAAAAG
ATTGCAATATCATTTTTATAATGCGGtgGAAGACAAGAAAGAAACACAAG
AATTTGAAATTACAAAAGAATTCAATATGGTTGAGTACACAACAACGGAC
GGTAAAACATACAATGACTTTGTAGCCTCTGTTCCTCACAAAGAAATAAG
TGGATTGAAAGCAGCGTCTGGGACACAGCCTAATGTTTTCATTATCACCC
TTGGGGAAGTATCGTCGAGTCACTTTCAAAGGAAGCTACCAAAATCTTGG
AAATATTTGCAAGATGAAATGAAGTCAACCAATTTTCCATTCTACGCACC
AACCcatgaaaattttattcaaaatgtcGATAATCTCATAAAAGtgGAAG
ACAAGAAAGAAACACAAGAATTTGAAATTACAAAAGAATTCAATATGGTT
GAGTACACAACAACGGACGGTAAAACATACAATGACTTTGTAGCCTCTGT
TCCTCACAAAGAAATAAGTGGATTGAAAGCAGCGTCTGGGACACAGCCTA
ATGTTTTCATTATCACCCTTGGGGAAGTATCGTCGAGTCACTTTCAAAGG
AAGCTACCAAAATCTTGGAAATATTTGCAAGATGAAATGAAGTCAACCAA
TTTTCCATTCTACGCACCAACCcatgaaaattttattcaaaatgtcGATA
ATCTCATAAAAGgtACTTCTCCGACAGAGAGCGCAGACGCCAAAACATTA
ATATCATTGGCACGTGAGAAAAACTATCTAACACTTTTCAGTTCAGATTC
TGTCCACGAAAATTTGACGACCATTGAGGCTGACCATTCTGCTTTATCAC
TCTTCCAAGCAATAGCAAAgtACTTCTCCGACAGAGAGCGCAGACGCCAA
AACATTAATATCATTGGCACGTGAGAAAAACTATCTAACACTTTTCAGTT
CAGATTCTGTCCACGAAAATTTGACGACCATTGAGGCTGACCATTCTGCT
TTATCACTCTTCCAAGCAATAGCAAAAAACTACGACATAAGAGCGAAACA
CTATTGCATCGCATCTAAAGGTTTCTATGAACTTTCTTTCAACTATTTGA
ATGATTTTATCAGCACATATAAAAAAGACGCTAAATTTGGCATGATTGTT
TTAAATGAAATGACTAGTCAGAATTATAACCTAATTGGATATATggacga
aaaattgaaagatattttacacAAAATTCATCAATTACCGAACACTGTTT
TGATAGTGAATTCGATTAAAGGAACATTGCTTGGGAAGCTGGCACAAACC
ATACAAGGGCAACAAGAGCATAAACAACCATTTCTCAACATATATTCATC
AAATGACTTGAAGGACAGATTTTCATTGAATGTTAAAAGAACTTCACAGA
TTGTGTCACCTTATGATTTGCATTTTACAGTAAAGCATATTTTAACAGGC
GATTCAACAAAGCATAAATATGGTTTATCGCTTTTCGGAGATAAAGACTT
TGAAacgagaaaatgtcaaatagTTGGTGTACCCTTCGAGTTGTGCCCTT
GTAAGATTTGAAAACTACGACATAAGAGCGAAACACTATTGCATCGCATC
TAAAGGTTTCTATGAACTTTCTTTCAACTATTTGAATGATTTTATCAGCA
CATATAAAAAAGACGCTAAATTTGGCATGATTGTTTTAAATGAAATGACT
AGTCAGAATTATAACCTAATTGGATATATggacgaaaaattgaaagatat
tttacacAAAATTCATCAATTACCGAACACTGTTTTGATAGTGAATTCGA
TTAAAGGAACATTGCTTGGGAAGCTGGCACAAACCATACAAGGGCAACAA
GAGCATAAACAACCATTTCTCAACATATATTCATCAAATGACTTGAAGGA
CAGATTTTCATTGAATGTTAAAAGAACTTCACAGATTGTGTCACCTTATG
ATTTGCATTTTACAGTAAAGCATATTTTAACAGGCGATTCAACAAAGCAT
AAATATGGTTTATCGCTTTTCGGAGATAAAGACTTTGAAacgagaaaatg
tcaaatagTTGGTGTACCCTTCGAGTTGTGCCCTTGTAAGATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1537049..1541932 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1315-1848:4351 |
| Aaloc | 1159-1311:3475 |
| Aaloc | 841-1155:2251 |
| Aaloc | 601-837:1755 |
| Aaloc | 445-600:847 |
| Aaloc | 1-441:1 |
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