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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1571813..1573928+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044907 ID=XLOC_044907|Name=XLOC_044907|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2116bp|location=Sequence derived from alignment at sc0000007_pilon:1571813..1573928+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCAATATGGTAGTTTCACAAGCTGAATATGTTCGAATTTGCTACTA
CACGAATTGGTCACAATATCGTCCAGGAAAAGCCAAGTTTTCACCATCAC
ACATCGATCCTTTTCTTTGCACACATATCGTCTATGCTTTTGCAAAGATC
GTCGAACATCGTTTGGAACCTTATGAATGGAATGATGATGAATATGCAAA
TTATTacaaacaaatcatTAATTTAAAGAACAAAAATCCAGCATTGAAGA
TTCTACTTGCTGTTGGTGGATGGAATCACGAATCTCAAGGAAGTCCTTTC
TCCGAAATGGTAAAGACACGCTCAAACAGACAAGGATTCATTCAACAAAG
TATCCGGTTCCTCAGACAACGAGGTTTCGATGGATTGGATTTAGATTGGG
AATATCCAGCCAGTAGAACATCTCCATTATCTGACAAACAAAGATTCACA
GTTCTTTGCAAAGAACTTCAACAAGCCTTCGACCAAGAAGCTCGATCTTC
TGGCAAAGAAAGATTAATGCTGACAGCAGCCGTAGCAGCAGGAAAGGCAA
CCATCCAAAGAGCTTACGAAGTTTCAAAACTCGGCCAATCTTTGGATATG
TTGCATTTGATGAGTTACGACCTTGCAGGAGCTTGGGATGGTAAAACTGG
TCACCACACATCAATGGATGCTAACAGGAAATGGTCCGTTCCCGTTGGAT
TAGATACATGGATTAACGGTGGATTTCCAGCTAATAAGGTAGGTGAAGAT
TCAGATTTAGATTAGGCTTAAACAAAGCGAAGGTTTCAATACTAAAGAAC
TGAAATCCACAATTTGCTAATTCTCGGTTTTACTGGATAATAAATGTTTT
TTCCcatattaaaaaacaaaaaaactaaacgaACCATATTTCCTTTAATA
TTATCTTTAGATTGCGTTGGGTTTGGGAACATACGGCAGATCATTCACAT
TGACTTCAAAGTCCAAATCAAAGATGGGAGAAAAATGTAAAGGAGCTGGA
GCAAGTGGTCCTTCCACCAGAGAAAGTGGATTTCTCTCTTATTACGAAAT
TTGCGACAAAATTAAATCTGGAATGAAAGTAGTTCAACATCCTAAAGCAA
TGGCACCATATGGTCACAAAGACAATTATTGGGTTGGTTATGATGACATT
GAAAGTTTGAGATATAAAGTCAAGAAACTGATCAAAGGACGCGGATTAAA
AGGAGCCATGTTTTGGTCACTTgatttggatgacttttctggaGCTCATT
GTAACCAAGGAAAATTCCCTTTGCTGAATGCTGTAAAGAAAGAACTTGGT
GCACAAGGAACAGTTACTTCAATCATCTCCAAATCAGCTCACATCAAAAC
CAAACCAAAGATTGGCGAGAAGTTATTGAAGAGCACCCGAACAACCACCA
CAACAACAAAAGCACCAATGAAATCAGCATCAAACAAAAAACGATGTTTT
GCAGCCAACGTGTGGCTTGGTCATGCTGCAATGGATCAATGGTGCATTCG
AAACTGTGCCGACGGAAACTGTGATCCTCGCTTTTGTTCCTGTGAAGAAA
CATCAATGAAATTATCTacgacaacgaccactcaaccgacaacaacgacc
actcaaccgacaacaacgaccactccatatacaacaacgaccaccaaGCC
TACGACAATGGCCATCCGACAAACCACTACTACCATCAGGCCAACAACTA
ccacaaaaccaaaaaaaatgataattcGACCAATAACAACAACCACTCCA
CAAACAACAGCTACTGTCCAATCATCAATTATGACGACTCAACCAACAGC
AACGGCCGTTCAACAAAGCATGAAGAAATCCACCAATAATCCAGACCAAT
CTTCAAACAtcatgaaaaatacaaaaagaacaaagaaatgttttgcCATA
AACATTTGGTATGGTCAACCATTAATCAACGATTGGTGTCAAAAGAATTG
TCGTGATGATTCATGTGAAGGTTACAAAAGTTATTGCTCCTGTGATCCTG
ACTGGAAACCAAATACCTCTTGCAAAGCCAGTAAACTTTTTAGtgcaaat
aaaaacattgaaaaatggTGCAGCAACACTTGTCCGACTGGTTATTGCCC
AAAAGCATTTTGTCAT Coding sequence (CDS) from alignment at sc0000007_pilon:1571813..1573928+ >XLOC_044907 ID=XLOC_044907|Name=XLOC_044907|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3888bp|location=Sequence derived from alignment at sc0000007_pilon:1571813..1573928+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCAATATGGTAGTTTCACAAGCTGAATATGTTCGAATTTGCTACTA
CACGAATTGGTCACAATATCGTCCAGGAAAAGCCAAGTTTTCACCATCAC
ACATCGATCCTTTTCTTTGCACACATATCGTCTATGCTTTTGCAAAGATC
GTCGAACATCGTTTGGAACCTTATGAATGGAATGATGATGAATATGCAAA
TTATTacaaacaaatcatTAATTTAAAGAACAAAAATCCAGCATTGAAGA
TTCTACTTGCTGTTGGTGGATGGAATCACGAATCTCAAGGAAGTCCTTTC
TCCGAAATGGTAAAGACACGCTCAAACAGACAAGGATTCATTCAACAAAG
TATCCGGTTCCTCAGACAACGAGGTTTCGATGGATTGGATTTAGATTGGG
AATATCCAGCCAGTAGAACATCTCCATTATCTGACAAACAAAGATTCACA
GTTCTTTGCAAAGAACTTCAACAAGCCTTCGACCAAGAAGCTCGATCTTC
TGGCAAAGAAAGATTAATGCTGACAGCAGCCGTAGCAGCAGGAAAGGCAA
CCATCCAAAGAGCTTACGAAGTTTCAAAACTCGGCCAATCTTTGGATATG
TTGCATTTGATGAGTTACGACCTTGCAGGAGCTTGGGATGGTAAAACTGG
TCACCACACATCAATGGATGCTAACAGGAAATGGTCCGTTCCCGTTGGAT
TAGATACATGGATTAACGGTGGATTTCCAGCTAATAAGATGGCCAATATG
GTAGTTTCACAAGCTGAATATGTTCGAATTTGCTACTACACGAATTGGTC
ACAATATCGTCCAGGAAAAGCCAAGTTTTCACCATCACACATCGATCCTT
TTCTTTGCACACATATCGTCTATGCTTTTGCAAAGATCGTCGAACATCGT
TTGGAACCTTATGAATGGAATGATGATGAATATGCAAATTATTacaaaca
aatcatTAATTTAAAGAACAAAAATCCAGCATTGAAGATTCTACTTGCTG
TTGGTGGATGGAATCACGAATCTCAAGGAAGTCCTTTCTCCGAAATGGTA
AAGACACGCTCAAACAGACAAGGATTCATTCAACAAAGTATCCGGTTCCT
CAGACAACGAGGTTTCGATGGATTGGATTTAGATTGGGAATATCCAGCCA
GTAGAACATCTCCATTATCTGACAAACAAAGATTCACAGTTCTTTGCAAA
GAACTTCAACAAGCCTTCGACCAAGAAGCTCGATCTTCTGGCAAAGAAAG
ATTAATGCTGACAGCAGCCGTAGCAGCAGGAAAGGCAACCATCCAAAGAG
CTTACGAAGTTTCAAAACTCGGCCAATCTTTGGATATGTTGCATTTGATG
AGTTACGACCTTGCAGGAGCTTGGGATGGTAAAACTGGTCACCACACATC
AATGGATGCTAACAGGAAATGGTCCGTTCCCGTTGGATTAGATACATGGA
TTAACGGTGGATTTCCAGCTAATAAGATTGCGTTGGGTTTGGGAACATAC
GGCAGATCATTCACATTGACTTCAAAGTCCAAATCAAAGATGGGAGAAAA
ATGTAAAGGAGCTGGAGCAAGTGGTCCTTCCACCAGAGAAAGTGGATTTC
TCTCTTATTACGAAATTTGCGACAAAATTAAATCTGGAATGAAAGTAGTT
CAACATCCTAAAGCAATGGCACCATATGGTCACAAAGACAATTATTGGGT
TGGTTATGATGACATTGAAAGTTTGAGATATAAAGTCAAGAAACTGATCA
AAGGACGCGGATTAAAAGGAGCCATGTTTTGGTCACTTgatttggatgac
ttttctggaGCTCATTGTAACCAAGGAAAATTCCCTTTGCTGAATGCTGT
AAAGAAAGAACTTGGTGCACAAGGAACAGTTACTTCAATCATCTCCAAAT
CAGCTCACATCAAAACCAAACCAAAGATTGGCGAGAAGTTATTGAAGAGC
ACCCGAACAACCACCACAACAACAAAAGCACCAATGAAATCAGCATCAAA
CAAAAAACGATGTTTTGCAGCCAACGTGTGGCTTGGTCATGCTGCAATGG
ATCAATGGTGCATTCGAAACTGTGCCGACGGAAACTGTGATCCTCGCTTT
TGTTCCTGTGAAGAAACATCAATGAAATTATCTacgacaacgaccactca
accgacaacaacgaccactcaaccgacaacaacgaccactccatatacaa
caacgaccaccaaGCCTACGACAATGGCCATCCGACAAACCACTACTACC
ATCAGGCCAACAACTAccacaaaaccaaaaaaaatgataattcGACCAAT
AACAACAACCACTCCACAAACAACAGCTACTGTCCAATCATCAATTATGA
CGACTCAACCAACAGCAACGGCCGTTCAACAAAGCATGAAGAAATCCACC
AATAATCCAGACCAATCTTCAAACAtcatgaaaaatacaaaaagaacaaa
gaaatgttttgcCATAAACATTTGGTATGGTCAACCATTAATCAACGATT
GGTGTCAAAAGAATTGTCGTGATGATTCATGTGAAGGTTACAAAAGTTAT
TGCTCCTGTGATCCTGACTGGAAACCAAATACCTCTTGCAAAGCCAGTAA
ACTTTTTAGtgcaaataaaaacattgaaaaatggTGCAGCAACACTTGTC
CGACTGGTTATTGCCCAAAAGCATTTTGTCATATTGCGTTGGGTTTGGGA
ACATACGGCAGATCATTCACATTGACTTCAAAGTCCAAATCAAAGATGGG
AGAAAAATGTAAAGGAGCTGGAGCAAGTGGTCCTTCCACCAGAGAAAGTG
GATTTCTCTCTTATTACGAAATTTGCGACAAAATTAAATCTGGAATGAAA
GTAGTTCAACATCCTAAAGCAATGGCACCATATGGTCACAAAGACAATTA
TTGGGTTGGTTATGATGACATTGAAAGTTTGAGATATAAAGTCAAGAAAC
TGATCAAAGGACGCGGATTAAAAGGAGCCATGTTTTGGTCACTTgatttg
gatgacttttctggaGCTCATTGTAACCAAGGAAAATTCCCTTTGCTGAA
TGCTGTAAAGAAAGAACTTGGTGCACAAGGAACAGTTACTTCAATCATCT
CCAAATCAGCTCACATCAAAACCAAACCAAAGATTGGCGAGAAGTTATTG
AAGAGCACCCGAACAACCACCACAACAACAAAAGCACCAATGAAATCAGC
ATCAAACAAAAAACGATGTTTTGCAGCCAACGTGTGGCTTGGTCATGCTG
CAATGGATCAATGGTGCATTCGAAACTGTGCCGACGGAAACTGTGATCCT
CGCTTTTGTTCCTGTGAAGAAACATCAATGAAATTATCTacgacaacgac
cactcaaccgacaacaacgaccactcaaccgacaacaacgaccactccat
atacaacaacgaccaccaaGCCTACGACAATGGCCATCCGACAAACCACT
ACTACCATCAGGCCAACAACTAccacaaaaccaaaaaaaatgataattcG
ACCAATAACAACAACCACTCCACAAACAACAGCTACTGTCCAATCATCAA
TTATGACGACTCAACCAACAGCAACGGCCGTTCAACAAAGCATGAAGAAA
TCCACCAATAATCCAGACCAATCTTCAAACAtcatgaaaaatacaaaaag
aacaaagaaatgttttgcCATAAACATTTGGTATGGTCAACCATTAATCA
ACGATTGGTGTCAAAAGAATTGTCGTGATGATTCATGTGAAGGTTACAAA
AGTTATTGCTCCTGTGATCCTGACTGGAAACCAAATACCTCTTGCAAAGC
CAGTAAACTTTTTAGtgcaaataaaaacattgaaaaatggTGCAGCAACA
CTTGTCCGACTGGTTATTGCCCAAAAGCATTTTGTCAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1571813..1573928 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 739-1944:911 |
| Aaloc | 1-738:1 |
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