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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:1424799..1427623+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044892 ID=XLOC_044892|Name=XLOC_044892|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2825bp|location=Sequence derived from alignment at sc0000067_pilon:1424799..1427623+ (Clytia hemisphaerica_ch_hm2_pilon)
AATCCCCAGCTATGCAACCAAAACGCATGCTTCTTGGTCGACACTGCCAA
ACTACCACACCAAAGAGACATTCTTTGTGATCTTCATGGAAAGTGGAAAC
ACACGAACACAAAGCACTTTACGTATCGCAAACGGAACCAGTTTTTGGAG
AGTACTAAGCACGAGGAATGTATGGTTGGCCACAATATTTCTGTGCAGAG
GGCAACATACTACCACAAGGAACATAAGGACTTTCATAAAGTTGTGGTCA
CCGTTTCAACTTTCCCAGTGGTATTCTTGCAATACTACTTCGATGGCCAA
GAACACCTGGTCATACCGACGGAGCCACATGGCAATACAAAAGGCCCTAA
GACCCCATTCATTCGAACGAAGCCTTCTGTCGTTGACAAAATAAGAAGTT
CTAAGGCAACACCAAAACAAACTCAAATCAACATTTACGACGAGGCTGGT
GGCTTTTTAAACATGTTGGGTCCAAATTACATACCAAGAAATCGACATCA
AATTTATAAGTAAGTGTAATTTGTGATTATTTGTCCAAAATAGAAACCAA
GAAAAGAAAGGTGTATTCTAGGGGCTTTTCTACTTCTCGTGTGTACATCC
GCCAAACATTACATGTACATGTACATTtgctcaagaaaaaaaatttcttt
ggacTTCAATTCAAACTTAACAAGATTATACACCAATCGATTACAAAGTT
TATGCTAATTAAGAATCCATATAAAATAATATAAGTTAAAAAATCCATAA
TTTGCGATTCAAGCTTTGCACTATAAattcattttcagccataaatcTCC
AAAGACGGACGAAATCGTCGAATTAATGGATGTCCaaaaaaaGGAGGGGA
GAACATCTGCACGTTTCATTCGCGAATTACAGTTAGTTCCTGAGCTAAGC
GTCTTTGTGTCGTCTTCACAACAGCTAAAAGATGTAGAGCGATTTTGTAC
AAAGACTATGAAATTTTGTGTGTTTGGGGTGGATGCAACTTACAACATGG
GCAAATTCTTAGTGACAGCTACGACTTATCGCCACCTAATGTTCCTCACC
AAAGAGGGTGTACATCCTGTAATGTTGGGGCCCAGCCTTGTACACTCAGG
CAAGAGTGAGGAGTCCTACCAAATGTTGCCAATGTTCATGATCAAAGAGC
ATCAACCAACCAAAGACGTCATTGTGAGGGGAAATGATTCAGAAACAGCC
CTCAGAAACGCATTGTCCGATTATTTACCAAATGCTCTGGAAATGCTCTG
TGATCTACATATGAAGCGTAATGTTGAAGCGAAATTGATAGGTAAGAGTG
GATAAAACCTTAGCCGGggaaaatatcggggaaaacttaGTCAGGGAAAT
TTGTTCAGGGTATTTCGGTAATTCTGTAACTTATAAAAATTTATGTATTT
TAAGTATAATGTCACAATCCTGGTATATTGCAGTCAATGGATTTACCAGA
CTGAAAGCAGCGTAACAAACGAATAGACGGGTCAAAAATAATCTCTCTAC
ATAGGTTTTTTACTAGCTGCTCTTTATTAGCTCCctttaaatgttttgaa
tttactTTTACTCATTTACTAGAGCTTGCCGTATTGCAAGAGAGAAAGAC
CGAAATAATGAAGGACATATTTGGGAGAACTATTGGGAATGATAGAGAAT
CTGGTTTGGTAGACTGTGTCGACTTGAACAGATTTGAGATTGAATGTGAA
GGTTTACTGGCAAAATGGAGCTCCTGGGGTGAAAAGGCTCACAAGTTTAG
ACAATATTTCCAGACCAACAAGATGAATGATATCAGAAACTGCATGTCAG
CAGAACTAAGGAAGCTGACTGTTCTTGGATATCCACCAAAGCCATACACT
CAGAATGCAAATGAGTGTGTCAATTCTGTGTTAAAAAGAGGAACACCACC
GGAAACAACAAGAAAGATGTCCCTTAAGGAAGTGGTTCAATCGCTGAGAG
CCATGAATGATGCTCAGCAGAAAGAAGTAGAACTTTCTCTGATTGGCAAT
GGAAATTGGAAATTGATCCCCACATATAAAAATGCGCTGAAAGAGTTGTC
AAACTACTCAATCATGCTCCCTCAACAGAGGTCAAGACTTCAACAAAAGT
TCAATAATATGGAGGTCAATGGAATCAACCACATGAGTTCTCTGTCTGTT
TCACCGGAAGATTGTGGATTGATCAACCCaccattttcagttttaaggGA
AATCTTTGCTGACGCTGTCAAAATCAAAGATAATGGCATCCTTCTAGTTC
CAGGTGTACAAACTGTGCGAATCGCCCAAAACCTACAGGAACCAACTAAG
CCGTTAACAGTCACATTTTCAGAAAACGGAGTAGTTAAATGTGACAGGTT
GTGCCAGCGGTTCACAGCTTACAAGATTTGTGAGCACACCCTTGCTGTGT
GTGAAAAGGAAGGAGTACTCaagaagtttattgaaaatcttaAGAAACGT
CAGAAAAAACGCTACAACACCTTATCAAACATAGTTAAtgttgataaaaa
caaaaacaccggaaaaaaatcaacaaaatcaacatccaaaaGATGGGGAG
CAAGCAGCAAGAAGATTACTCAAGCTGAGTTGGTAGACGCTTTAGCTATG
ACAGACCCTTGTTTTCAACAATCTAACAACAAGCAACAACCTATACAAgg
tattttcaacattttagctTTAAATTCAAGTTCTACGGAGTGCATCACAA
AAAACACTTTGACTTTAATTTCCTCCAAATCtacaaatattgaagaaatt
gaTTCATTATGGTTAGGTAGATCctgtttaaaaaataagtttcagGGAGT
ActcataaatttcaaaaagggaTGA Coding sequence (CDS) from alignment at sc0000067_pilon:1424799..1427623+ >XLOC_044892 ID=XLOC_044892|Name=XLOC_044892|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4530bp|location=Sequence derived from alignment at sc0000067_pilon:1424799..1427623+ (Clytia hemisphaerica_ch_hm2_pilon)
AATCCCCAGCTATGCAACCAAAACGCATGCTTCTTGGTCGACACTGCCAA
ACTACCACACCAAAGAGACATTCTTTGTGATCTTCATGGAAAGTGGAAAC
ACACGAACACAAAGCACTTTACGTATCGCAAACGGAACCAGTTTTTGGAG
AGTACTAAGCACGAGGAATGTATGGTTGGCCACAATATTTCTGTGCAGAG
GGCAACATACTACCACAAGGAACATAAGGACTTTCATAAAGTTGTGGTCA
CCGTTTCAACTTTCCCAGTGGTATTCTTGCAATACTACTTCGATGGCCAA
GAACACCTGGTCATACCGACGGAGCCACATGGCAATACAAAAGGCCCTAA
GACCCCATTCATTCGAACGAAGCCTTCTGTCGTTGACAAAATAAGAAGTT
CTAAGGCAACACCAAAACAAACTCAAATCAACATTTACGACGAGGCTGGT
GGCTTTTTAAACATGTTGGGTCCAAATTACATACCAAGAAATCGACATCA
AATTTATAAAATCCCCAGCTATGCAACCAAAACGCATGCTTCTTGGTCGA
CACTGCCAAACTACCACACCAAAGAGACATTCTTTGTGATCTTCATGGAA
AGTGGAAACACACGAACACAAAGCACTTTACGTATCGCAAACGGAACCAG
TTTTTGGAGAGTACTAAGCACGAGGAATGTATGGTTGGCCACAATATTTC
TGTGCAGAGGGCAACATACTACCACAAGGAACATAAGGACTTTCATAAAG
TTGTGGTCACCGTTTCAACTTTCCCAGTGGTATTCTTGCAATACTACTTC
GATGGCCAAGAACACCTGGTCATACCGACGGAGCCACATGGCAATACAAA
AGGCCCTAAGACCCCATTCATTCGAACGAAGCCTTCTGTCGTTGACAAAA
TAAGAAGTTCTAAGGCAACACCAAAACAAACTCAAATCAACATTTACGAC
GAGGCTGGTGGCTTTTTAAACATGTTGGGTCCAAATTACATACCAAGAAA
TCGACATCAAATTTATAAccataaatcTCCAAAGACGGACGAAATCGTCG
AATTAATGGATGTCCaaaaaaaGGAGGGGAGAACATCTGCACGTTTCATT
CGCGAATTACAGTTAGTTCCTGAGCTAAGCGTCTTTGTGTCGTCTTCACA
ACAGCTAAAAGATGTAGAGCGATTTTGTACAAAGACTATGAAATTTTGTG
TGTTTGGGGTGGATGCAACTTACAACATGGGCAAATTCTTAGTGACAGCT
ACGACTTATCGCCACCTAATGTTCCTCACCAAAGAGGGTGTACATCCTGT
AATGTTGGGGCCCAGCCTTGTACACTCAGGCAAGAGTGAGGAGTCCTACC
AAATGTTGCCAATGTTCATGATCAAAGAGCATCAACCAACCAAAGACGTC
ATTGTGAGGGGAAATGATTCAGAAACAGCCCTCAGAAACGCATTGTCCGA
TTATTTACCAAATGCTCTGGAAATGCTCTGTGATCTACATATGAAGCGTA
ATGTTGAAGCGAAATTGATAGccataaatcTCCAAAGACGGACGAAATCG
TCGAATTAATGGATGTCCaaaaaaaGGAGGGGAGAACATCTGCACGTTTC
ATTCGCGAATTACAGTTAGTTCCTGAGCTAAGCGTCTTTGTGTCGTCTTC
ACAACAGCTAAAAGATGTAGAGCGATTTTGTACAAAGACTATGAAATTTT
GTGTGTTTGGGGTGGATGCAACTTACAACATGGGCAAATTCTTAGTGACA
GCTACGACTTATCGCCACCTAATGTTCCTCACCAAAGAGGGTGTACATCC
TGTAATGTTGGGGCCCAGCCTTGTACACTCAGGCAAGAGTGAGGAGTCCT
ACCAAATGTTGCCAATGTTCATGATCAAAGAGCATCAACCAACCAAAGAC
GTCATTGTGAGGGGAAATGATTCAGAAACAGCCCTCAGAAACGCATTGTC
CGATTATTTACCAAATGCTCTGGAAATGCTCTGTGATCTACATATGAAGC
GTAATGTTGAAGCGAAATTGATAGAGCTTGCCGTATTGCAAGAGAGAAAG
ACCGAAATAATGAAGGACATATTTGGGAGAACTATTGGGAATGATAGAGA
ATCTGGTTTGGTAGACTGTGTCGACTTGAACAGATTTGAGATTGAATGTG
AAGGTTTACTGGCAAAATGGAGCTCCTGGGGTGAAAAGGCTCACAAGTTT
AGACAATATTTCCAGACCAACAAGATGAATGATATCAGAAACTGCATGTC
AGCAGAACTAAGGAAGCTGACTGTTCTTGGATATCCACCAAAGCCATACA
CTCAGAATGCAAATGAGTGTGTCAATTCTGTGTTAAAAAGAGGAACACCA
CCGGAAACAACAAGAAAGATGTCCCTTAAGGAAGTGGTTCAATCGCTGAG
AGCCATGAATGATGCTCAGCAGAAAGAAGTAGAACTTTCTCTGATTGGCA
ATGGAAATTGGAAATTGATCCCCACATATAAAAATGCGCTGAAAGAGTTG
TCAAACTACTCAATCATGCTCCCTCAACAGAGGTCAAGACTTCAACAAAA
GTTCAATAATATGGAGGTCAATGGAATCAACCACATGAGTTCTCTGTCTG
TTTCACCGGAAGATTGTGGATTGATCAACCCaccattttcagttttaagg
GAAATCTTTGCTGACGCTGTCAAAATCAAAGATAATGGCATCCTTCTAGT
TCCAGGTGTACAAACTGTGCGAATCGCCCAAAACCTACAGGAACCAACTA
AGCCGTTAACAGTCACATTTTCAGAAAACGGAGTAGTTAAATGTGACAGG
TTGTGCCAGCGGTTCACAGCTTACAAGATTTGTGAGCACACCCTTGCTGT
GTGTGAAAAGGAAGGAGTACTCaagaagtttattgaaaatcttaAGAAAC
GTCAGAAAAAACGCTACAACACCTTATCAAACATAGTTAAtgttgataaa
aacaaaaacaccggaaaaaaatcaacaaaatcaacatccaaaaGATGGGG
AGCAAGCAGCAAGAAGATTACTCAAGCTGAGTTGGTAGACGCTTTAGCTA
TGACAGACCCTTGTTTTCAACAATCTAACAACAAGCAACAACCTATACAA
ggtattttcaacattttagctTTAAATTCAAGTTCTACGGAGTGCATCAC
AAAAAACACTTTGACTTTAATTTCCTCCAAATCtacaaatattgaagaaa
ttgaTTCATTATGGTTAGGTAGATCctgtttaaaaaataagtttcagGGA
GTActcataaatttcaaaaagggaTGAAGCTTGCCGTATTGCAAGAGAGA
AAGACCGAAATAATGAAGGACATATTTGGGAGAACTATTGGGAATGATAG
AGAATCTGGTTTGGTAGACTGTGTCGACTTGAACAGATTTGAGATTGAAT
GTGAAGGTTTACTGGCAAAATGGAGCTCCTGGGGTGAAAAGGCTCACAAG
TTTAGACAATATTTCCAGACCAACAAGATGAATGATATCAGAAACTGCAT
GTCAGCAGAACTAAGGAAGCTGACTGTTCTTGGATATCCACCAAAGCCAT
ACACTCAGAATGCAAATGAGTGTGTCAATTCTGTGTTAAAAAGAGGAACA
CCACCGGAAACAACAAGAAAGATGTCCCTTAAGGAAGTGGTTCAATCGCT
GAGAGCCATGAATGATGCTCAGCAGAAAGAAGTAGAACTTTCTCTGATTG
GCAATGGAAATTGGAAATTGATCCCCACATATAAAAATGCGCTGAAAGAG
TTGTCAAACTACTCAATCATGCTCCCTCAACAGAGGTCAAGACTTCAACA
AAAGTTCAATAATATGGAGGTCAATGGAATCAACCACATGAGTTCTCTGT
CTGTTTCACCGGAAGATTGTGGATTGATCAACCCaccattttcagtttta
aggGAAATCTTTGCTGACGCTGTCAAAATCAAAGATAATGGCATCCTTCT
AGTTCCAGGTGTACAAACTGTGCGAATCGCCCAAAACCTACAGGAACCAA
CTAAGCCGTTAACAGTCACATTTTCAGAAAACGGAGTAGTTAAATGTGAC
AGGTTGTGCCAGCGGTTCACAGCTTACAAGATTTGTGAGCACACCCTTGC
TGTGTGTGAAAAGGAAGGAGTACTCaagaagtttattgaaaatcttaAGA
AACGTCAGAAAAAACGCTACAACACCTTATCAAACATAGTTAAtgttgat
aaaaacaaaaacaccggaaaaaaatcaacaaaatcaacatccaaaaGATG
GGGAGCAAGCAGCAAGAAGATTACTCAAGCTGAGTTGGTAGACGCTTTAG
CTATGACAGACCCTTGTTTTCAACAATCTAACAACAAGCAACAACCTATA
CAAggtattttcaacattttagctTTAAATTCAAGTTCTACGGAGTGCAT
CACAAAAAACACTTTGACTTTAATTTCCTCCAAATCtacaaatattgaag
aaattgaTTCATTATGGTTAGGTAGATCctgtttaaaaaataagtttcag
GGAGTActcataaatttcaaaaagggaTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:1424799..1427623 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1096-2346:1575 |
| Aaloc | 592-1092:790 |
| Aaloc | 82-588:1 |
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