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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000198_pilon:579259..582880- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044883 ID=XLOC_044883|Name=XLOC_044883|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3622bp|location=Sequence derived from alignment at sc0000198_pilon:579259..582880- (Clytia hemisphaerica_ch_hm2_pilon)
ACATGTAGCTTAGAAGTTTCAATGACGACCACAATGAAGCCCATCCTTTG
GTTATTCTCTGGCAGCGATCACTTGGGTATGATCACGCTCATGGAAATGG
ACATGACAAGCGTCCCCAAAGTCATGGAAAGTTTTGTAGCTTGTGAAACG
AGGATTTGTTGTGCGGAAAGGGTACCGGAAGACGGATTCTACTCTCTGGT
ACCTTACATTCAAAATGTTTCCGTATGGGTCGGTACAATGGCTGGAAGGT
AATTATTCATAGCTTCAATGGAAATGTTGTCTCGCGAATGACTGATTAGC
TCTAATTTGTATATGTAATCACATGATAACGAGTGCAATTTTCGATTTGT
ACGAGTTATTATGTGATTACGAGCTAATCGCACAACTTGTTTTACTACTT
TTTTCCCGTTAGAAAAGTAAATTACACTGAAAGTTTTGTATTTTTTTCTT
CTATCTACGTTTTTCTTTTATTAAAGTTTATAGATTTTCTTTCTCACAAA
ATGAAATTCGAATGCAATTAAAACGTTCGATGAAAAAAATGTAAGAAAAA
CATTTACATCAATTTTGTAAACATTGGCGCTGCATCGAGAGTGTAATTAA
CGATTAATTGCTCTCTACAGGATGTAATTAACGATTAATTGATATCTTTG
AAGGCGCGCCAAATAAGAAAGAATAACTCATCGCGCGAATACAAAAATAA
TCACAACGACCTGATTTGAAATGAAGATTCTACCGTCAATTTTGTGTTTT
TCTGAAATTTTATTTTCAACTTTTTACTTCCTAGAATTTTGTTGTTTGAT
CCCAACATCGAAGAAAGATATCCGTCACTGCATACCACACTCAAAGATGC
CGTCATCAGTTTGAAGTGAGTGCTGAAAATTGTTTTTTTTTTGTTATCCA
ATAACCCATTCGATTCAGAGTTTAGAATTATTTTGTGGTAGGTAGTAATG
ACGCCTAAAGTTCCGATTTTTTGTTTACCTAGGTACTGTCGGAATCGTAT
GTTTGCAGGCTTGGCGAATGGAACTTTGGCTTGTTTCAGGAGAAAAGTCG
GTATGTTTCTCCATTTACTTTTTTTCATAAGTTCTCTTTGATGGCACTAG
ATCCGCAACTTTACAAATTATGGAATTTATGTATGTGTGTTTTTCTGCGA
CTGAGATGACGATAAGGTTCTAATTTGTATACATCCTGGCTAACTGACTG
AGGACGACAGTAAATCAGCACTTTTTACCGTCCTTGATTTTTCGGGTCAA
AACTGCGGATTATTCCAAATCGCTCTAGTCGCTTTACCGTCCTTGAAGGT
GCAAATACATAAACTCGCTAATATTTCTCAACTCAGAGGGTAATTGGGAT
CTGTCGAACCCGACCATCGTGTGTTTGGATACGAATGGTGTGTTGAGTAT
GACAGAAGTTGTTGGTCATTTGTGGTGTGGATGTGCTTCTAATGTGTATG
TCGTCAACACCGTCACTCTTGCTATCGAGGTAAACGTCTTTTATCCTGAT
AAGTTGTGTTAAGCGATCCTCGAGAGAATCCGAGTATTGAATCATTAAAA
AAATATTACATTTTCTAAAATCATGATAAATAATCAGGCTGGTGATCTTC
TACAGCGAAACACGTTTTATTTACTGAACTATAGCGAGACTATCTACTCT
TTTACACATGCTTGTCACTCGTTACTCGAACATTCCAGGAAAAATTTTAT
TCTATCCTTTAAAAGTAATAAACCTGTCTATTTGCTTTGCAGAGGAAATT
GACAGTGGAGGGAGGTGGAGTGAAGCATCTGGTCGCTTATGGAATTGGCG
TGTGGGTGTCATCGTGGCGTTCGTCTAAACTACAATTGTACCACGCTGAA
ACGTTGGATCAACTACAAACGCTGAATGTCTCCACTGCTGTCTCTCGAAT
GAAAAATGGTATTGAAATTCTTATTCATGTACTCTCGACAAGTTTAAAGT
TCATCATTTTTGGGCCCTTTCTTACTATTAAAGCAAGAATTCGTAGCTCC
CTCTGACTGAGCCTACAATTCCCAGGAGTATGGTATGACTCTGATATTTC
AGCGTTCATATCTTGTCATTAACGTTTCTCATATCTTTATCTGAGTTGAT
TTTCGTGATTCCCTGCAAGGAATAGGTTGCTTAGAATTGAATTTCCCTTC
CAACGGTATATAGTCTTGTAGGGTTTTCCAAAGGCAAAACTTGGAAAAAG
TGGTGACGTAAATAGAAACAACATTTTTAAGAGTGTCTCTCTCAATTCTT
TCCCTCTGCCCTATGATGAGTAATTGTGTAAAATTTCAAAGCCAATTTGA
ATTATGTATCTACTACACTGTCTCATTGAACTATCGTGCAACTTTATTTT
AATCAATTCCATTCACGATTTATTCTCCTTTTTTTAGACATCGACATCAA
TGTTGAAAAGATCGTCCCGGAAAAACTTTACGTCACCTCCATCATGGCAC
GGAGCGGTCTGTTATGGGTCGGAACCGATCAAGGTCTCATCTTAACATAC
CCTCTCCCTAAACTTGGTGGCATTCCGAAAGTCAATGGATCTGCCTGTAT
TTCGTTCCATGGCCACGATGGCCCTGTACGGCACTTGTATGCTTTTAAAG
TGCAGAAACAAAATACTCAAAATAGCACAAAAATCGGGAAGATTGGTAAA
TTTTCTATTCTCTGTTTTCACAATGTTATCCTTTTGGGCCAGGGTGTTTT
TTTAAGAAACACACTTTTAAGAAACATGGGGCTCAGAATGCCTAAAAATT
AAGAAACATCTAAGAAATATGCTGAGGCTGAGAATGAGAAAATAACATTT
TCTAATTCGGTTTTTTTATTAAGAACCTTCCAATCAAAGAAAAGTTCGAG
AAAAATACTTACATAACAGTTAGAAACACTTGAGAAAGTCAGAAAATCAA
TATAGAAGATAGGAAAGTACCGTAGATTAGACTATTGTATTATCACCATG
CGTCCTTTAAGCACGACAAAGTTTAGAAACATGTAAGAAACATTTAAGGC
TCAAAAGGCCGATTTCTTAAGAAACATTGAGGCTGCGTGGTAAAACTAGT
TTCTTAAAAAAAACGTGTACTCAATAATTCTTTAGAGACGAGCTTTTCAT
TTTTATTTTTCCATAGAAAAAGAAGGAGAACTCCACGGTGAGGAAGAGGG
AAGAAGAAGCTCTCGTTTTTATCGTAGTGCTTTCGAAGAAGTGGACGAAC
TTGGCTTGTCTATCGAGGCGTTGGATCAAGTGGCGGATGATGAGGGTGGA
GAGGGTGGAGAGGGTGGACCTCTTCCTGTCTACTTCGAAGTAGAGGCGGA
TAGAGGGGTGAACAAAAGTGAGGAGAATGGACTGTTCGTCAATGAAGCAC
AACAGCACCAACCAACTACTGACTATGCAGAATATGATAACGAGAGTAGT
TATTATGATAAAGAATCCGTTGACCAACCTATCAACGGAAATGATGATCA
ACCTGATCAAAGTTCCACGAGTGGGATTCCTGACGAGTCGACAGAAATTG
GACTAGAAGAGACGGAGACTCCTGAAGTTGATCTTCTAGAAGAAGCGAAA
GAGAAGAAAGCAGAACCAATCTCCAAAGAAGTCTCGAACGAGGAAAGAGA
ACAAATTGTCGTCAAAACCGAG Coding sequence (CDS) from alignment at sc0000198_pilon:579259..582880- >XLOC_044883 ID=XLOC_044883|Name=XLOC_044883|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2940bp|location=Sequence derived from alignment at sc0000198_pilon:579259..582880- (Clytia hemisphaerica_ch_hm2_pilon)
ACATGTAGCTTAGAAGTTTCAATGACGACCACAATGAAGCCCATCCTTTG
GTTATTCTCTGGCAGCGATCACTTGGGTATGATCACGCTCATGGAAATGG
ACATGACAAGCGTCCCCAAAGTCATGGAAAGTTTTGTAGCTTGTGAAACG
AGGATTTGTTGTGCGGAAAGGGTACCGGAAGACGGATTCTACTCTCTGGT
ACCTTACATTCAAAATGTTTCCGTATGGGTCGGTACAATGGCTGGAAGAC
ATGTAGCTTAGAAGTTTCAATGACGACCACAATGAAGCCCATCCTTTGGT
TATTCTCTGGCAGCGATCACTTGGGTATGATCACGCTCATGGAAATGGAC
ATGACAAGCGTCCCCAAAGTCATGGAAAGTTTTGTAGCTTGTGAAACGAG
GATTTGTTGTGCGGAAAGGGTACCGGAAGACGGATTCTACTCTCTGGTAC
CTTACATTCAAAATGTTTCCGTATGGGTCGGTACAATGGCTGGAAGAATT
TTGTTGTTTGATCCCAACATCGAAGAAAGATATCCGTCACTGCATACCAC
ACTCAAAGATGCCGTCATCAGTTTGAAAATTTTGTTGTTTGATCCCAACA
TCGAAGAAAGATATCCGTCACTGCATACCACACTCAAAGATGCCGTCATC
AGTTTGAAGTACTGTCGGAATCGTATGTTTGCAGGCTTGGCGAATGGAAC
TTTGGCTTGTTTCAGGAGAAAAGTCGGTACTGTCGGAATCGTATGTTTGC
AGGCTTGGCGAATGGAACTTTGGCTTGTTTCAGGAGAAAAGTCGAGGGTA
ATTGGGATCTGTCGAACCCGACCATCGTGTGTTTGGATACGAATGGTGTG
TTGAGTATGACAGAAGTTGTTGGTCATTTGTGGTGTGGATGTGCTTCTAA
TGTGTATGTCGTCAACACCGTCACTCTTGCTATCGAGAGGGTAATTGGGA
TCTGTCGAACCCGACCATCGTGTGTTTGGATACGAATGGTGTGTTGAGTA
TGACAGAAGTTGTTGGTCATTTGTGGTGTGGATGTGCTTCTAATGTGTAT
GTCGTCAACACCGTCACTCTTGCTATCGAGAGGAAATTGACAGTGGAGGG
AGGTGGAGTGAAGCATCTGGTCGCTTATGGAATTGGCGTGTGGGTGTCAT
CGTGGCGTTCGTCTAAACTACAATTGTACCACGCTGAAACGTTGGATCAA
CTACAAACGCTGAATGTCTCCACTGCTGTCTCTCGAATGAAAAATGAGGA
AATTGACAGTGGAGGGAGGTGGAGTGAAGCATCTGGTCGCTTATGGAATT
GGCGTGTGGGTGTCATCGTGGCGTTCGTCTAAACTACAATTGTACCACGC
TGAAACGTTGGATCAACTACAAACGCTGAATGTCTCCACTGCTGTCTCTC
GAATGAAAAATGACATCGACATCAATGTTGAAAAGATCGTCCCGGAAAAA
CTTTACGTCACCTCCATCATGGCACGGAGCGGTCTGTTATGGGTCGGAAC
CGATCAAGGTCTCATCTTAACATACCCTCTCCCTAAACTTGGTGGCATTC
CGAAAGTCAATGGATCTGCCTGTATTTCGTTCCATGGCCACGATGGCCCT
GTACGGCACTTGTATGCTTTTAAAGTGCAGAAACAAAATACTCAAAATAG
CACAAAAATCGGGAAGATTGACATCGACATCAATGTTGAAAAGATCGTCC
CGGAAAAACTTTACGTCACCTCCATCATGGCACGGAGCGGTCTGTTATGG
GTCGGAACCGATCAAGGTCTCATCTTAACATACCCTCTCCCTAAACTTGG
TGGCATTCCGAAAGTCAATGGATCTGCCTGTATTTCGTTCCATGGCCACG
ATGGCCCTGTACGGCACTTGTATGCTTTTAAAGTGCAGAAACAAAATACT
CAAAATAGCACAAAAATCGGGAAGATTGAAAAAGAAGGAGAACTCCACGG
TGAGGAAGAGGGAAGAAGAAGCTCTCGTTTTTATCGTAGTGCTTTCGAAG
AAGTGGACGAACTTGGCTTGTCTATCGAGGCGTTGGATCAAGTGGCGGAT
GATGAGGGTGGAGAGGGTGGAGAGGGTGGACCTCTTCCTGTCTACTTCGA
AGTAGAGGCGGATAGAGGGGTGAACAAAAGTGAGGAGAATGGACTGTTCG
TCAATGAAGCACAACAGCACCAACCAACTACTGACTATGCAGAATATGAT
AACGAGAGTAGTTATTATGATAAAGAATCCGTTGACCAACCTATCAACGG
AAATGATGATCAACCTGATCAAAGTTCCACGAGTGGGATTCCTGACGAGT
CGACAGAAATTGGACTAGAAGAGACGGAGACTCCTGAAGTTGATCTTCTA
GAAGAAGCGAAAGAGAAGAAAGCAGAACCAATCTCCAAAGAAGTCTCGAA
CGAGGAAAGAGAACAAATTGTCGTCAAAACCGAGAAAAAGAAGGAGAACT
CCACGGTGAGGAAGAGGGAAGAAGAAGCTCTCGTTTTTATCGTAGTGCTT
TCGAAGAAGTGGACGAACTTGGCTTGTCTATCGAGGCGTTGGATCAAGTG
GCGGATGATGAGGGTGGAGAGGGTGGAGAGGGTGGACCTCTTCCTGTCTA
CTTCGAAGTAGAGGCGGATAGAGGGGTGAACAAAAGTGAGGAGAATGGAC
TGTTCGTCAATGAAGCACAACAGCACCAACCAACTACTGACTATGCAGAA
TATGATAACGAGAGTAGTTATTATGATAAAGAATCCGTTGACCAACCTAT
CAACGGAAATGATGATCAACCTGATCAAAGTTCCACGAGTGGGATTCCTG
ACGAGTCGACAGAAATTGGACTAGAAGAGACGGAGACTCCTGAAGTTGAT
CTTCTAGAAGAAGCGAAAGAGAAGAAAGCAGAACCAATCTCCAAAGAAGT
CTCGAACGAGGAAAGAGAACAAATTGTCGTCAAAACCGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000198_pilon | genome | sc0000198_pilon:579259..582880 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1699-2202:505 |
| Aaloc | 1441-1695:1234 |
| Aaloc | 1273-1437:1881 |
| Aaloc | 1132-1272:2285 |
| Aaloc | 1063-1128:2640 |
| Aaloc | 982-1059:2838 |
| Aaloc | 733-978:3623 |
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