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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000022_pilon:473443..476080+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044838 ID=XLOC_044838|Name=XLOC_044838|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2638bp|location=Sequence derived from alignment at sc0000022_pilon:473443..476080+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTATCTTCATTCTTGAAATCGCTGGAGGAATCTACGCTGCCGTTAA
GAAAGATGATGTTCTCAAATCCTTGAAAACGAACTTCCAACGATTAATGA
CTACATCTTATGGACAAACCGAAAACAACAAAGCAAACGAGGGATACACT
AACTCCATTGACTGGTTCCAAGAAAATGTAagtattgtctttgtttttgt
cAGTTTTAGTGATTTATTATAATTAAGTGTTTGCAGGCATCTTATTACGA
CTTTATCCAGTGCTAAGAATACATATATACTATTAATAATAGAAGATATA
CTATTAATAATAGAACTCCTTTTTGAAATTAGACAACCAGAGCTAAAAAT
TCTATATCAGAACTATAAACTAGGCTacctcttttctttttaactttaCA
GCAATAAAATACTGACAAGTTTAACACAaaacattgacaagtaatctctg
ggacaattggtcgaaacatgggactgttgatatcttgcctgtattttcac
ttactgttaaatctctttgacaacaaatttgtttgataactCCCAAGTTT
AGCAATCATACTTTCTGctataacatgtcacaataactttcactggtagc
gcgccctttttaaatttttgtttcaattcaaAATGACCAGATGCCGATTA
GAGAACGCCCAAACGCCCAACCGCCTatcgcctgatgggattaacaaata
aagAGTGTAACTTGTCGCGCGAGTGACTTCAAACGCTCAATTGTTTTGCC
ACTAGTATGGTCTTTtttgttccagacattcgcgtgtgttccactacgga
tttttttcatgtttcgATTTAAAATCCTACTcgatgcgaaagagaaattg
tgtaatgtactttttaaataaaccgttcattaagtcaaatcaaatgactt
tggaggtttggtgaaatgttggccgaattgccgtcccatgttttgtcaga
tggtaccaagttagagcagttgatggtaaggTACTTGcagcctttcagtg
ccttgcatgaCGGGCAGCTAaaatgttggcttgaaatctaaaatgaaact
actgaaaacaaaagtaaaatcagcccacaccaaatcccgtaatcttgata
taggagttttagTCTTAACTGTTAGATATTATTACTTTTATTCCTATCTA
GcaatttaatttcaatatttcacaGGTCAAATGTTGTGGCTCCACCGGAC
CTAACTCATGGAAAAATACTACTTGGACTAACACCAACAGGGACAAGGCA
GTTAACGGGTCAGATTACCAACTCTTCCCAAAATCATGCTGCAAATCTGG
TGATTGTAACATGGGAAATGGCTTCCCTGTTACTTCAAATGACAACATCT
TCATGGATGTAAGTCTAACAAATGATCTAAGATAAATGGAATATTATTTG
GCATTCCATTTCATATCCATACAGGGAGATAGACTATCATTTCCAAGGGT
AATTTTAGCAGAATTTCCAGGGGTCTAAATGtgtttttcccatttttcca
ggggataaatatttttaaatttccatggggtaaaagactaattttagttt
ttccacctcactttaaggtatgaaaagaatatttttgcaaattttgccac
ttcCCGAGGTATTCACACAtatccaagaaatatttttgaatttaagaGGT
TCGTACAGGGGGTggctgtatggaaatttagtggttTGACCCATTGCTGG
ATGAATCCTTGAGCTCTATGAGAGACGGGTAACTTTTTAATAATAACTAA
TTGTTTACATGTGGACTTGTTTTTAGACTCcttgtttaaaaattgaaatg
agaTGGATTGCTTAATTCGAAATCAGAATTtggatattaaaaaaaatcta
tgatTCTCAAGGCATTTAAAACTGAAAAGCTTGAAATTCTTAAAAGTACA
TTTAAATGAAGAGgatctttaaattcttttccactttttataaaaaaatt
gttttcatgaCTATTTATTTATCTTGTTTGGTGGTTTTGGATATTAGAAA
CTTTCCGTCAGATATTTCCGTTAAAACTGCATATGCATGCCTTTCCATAA
GCTAATCATTTAGAGAACTTATATAGGAACCCTAACAAGAGAATACTtaa
tatttaatgaaaaaaatctttctccgTCCTATTTCTTTTGGATAATCCTT
AATCATTTCCTTTCCACTTTCAAACATTGAAAATCGAGTGTCCGGACTGT
ATACTaatttattaaaggttttatttttacataagtgttcccgtttcata
tcaggacagtgtcttcctattgttatttgctgatataagcaaaaaatgtt
tttcttttcctctttctgaccaatcttgctccacatccgtgtcactccaa
tgtgaaaaagcttgtaaattaaaattgagtaagcaaacgatagatatcac
tcttatttcaCGTAAAATAGTAGTAAGATGTGAATCAAAAACAGCACTTC
TTATACCACTAATCATAACTTGAgattctcttctttcttttcaggGTTGC
GTGACAGAAAGTGAACAGTTCTTGAACGATCACATGAAAGAATTGGTCGG
TGTCGGTGTCGGTATCGCTTTTATTCAAATCATCGGTATCGTGTTCGCCA
TcttattgtgcaaaaaaatcggAGTAGAATCTGTCTAA Coding sequence (CDS) from alignment at sc0000022_pilon:473443..476080+ >XLOC_044838 ID=XLOC_044838|Name=XLOC_044838|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1008bp|location=Sequence derived from alignment at sc0000022_pilon:473443..476080+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTATCTTCATTCTTGAAATCGCTGGAGGAATCTACGCTGCCGTTAA
GAAAGATGATGTTCTCAAATCCTTGAAAACGAACTTCCAACGATTAATGA
CTACATCTTATGGACAAACCGAAAACAACAAAGCAAACGAGGGATACACT
AACTCCATTGACTGGTTCCAAGAAAATATGCTTATCTTCATTCTTGAAAT
CGCTGGAGGAATCTACGCTGCCGTTAAGAAAGATGATGTTCTCAAATCCT
TGAAAACGAACTTCCAACGATTAATGACTACATCTTATGGACAAACCGAA
AACAACAAAGCAAACGAGGGATACACTAACTCCATTGACTGGTTCCAAGA
AAATGTCAAATGTTGTGGCTCCACCGGACCTAACTCATGGAAAAATACTA
CTTGGACTAACACCAACAGGGACAAGGCAGTTAACGGGTCAGATTACCAA
CTCTTCCCAAAATCATGCTGCAAATCTGGTGATTGTAACATGGGAAATGG
CTTCCCTGTTACTTCAAATGACAACATCTTCATGGATGTCAAATGTTGTG
GCTCCACCGGACCTAACTCATGGAAAAATACTACTTGGACTAACACCAAC
AGGGACAAGGCAGTTAACGGGTCAGATTACCAACTCTTCCCAAAATCATG
CTGCAAATCTGGTGATTGTAACATGGGAAATGGCTTCCCTGTTACTTCAA
ATGACAACATCTTCATGGATgGTTGCGTGACAGAAAGTGAACAGTTCTTG
AACGATCACATGAAAGAATTGGTCGGTGTCGGTGTCGGTATCGCTTTTAT
TCAAATCATCGGTATCGTGTTCGCCATcttattgtgcaaaaaaatcggAG
TAGAATCTGTCTAAgGTTGCGTGACAGAAAGTGAACAGTTCTTGAACGAT
CACATGAAAGAATTGGTCGGTGTCGGTGTCGGTATCGCTTTTATTCAAAT
CATCGGTATCGTGTTCGCCATcttattgtgcaaaaaaatcggAGTAGAAT
CTGTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000022_pilon | genome | sc0000022_pilon:473443..476080 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 361-504:2495 |
| Aaloc | 178-360:1176 |
| Aaloc | 1-177:1 |
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