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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000022_pilon:479938..485448+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044837 ID=XLOC_044837|Name=XLOC_044837|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5511bp|location=Sequence derived from alignment at sc0000022_pilon:479938..485448+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAAGTAGGATGGGATGATGTCACTTATCTCCGGAAGAAAACACC
AAAGGCTGCTGAAGCTCGATCAAGCAAAGtaagattttgatgaatgaata
GCTATTTTTTTAAAACCTTCTACTGCTATTTCCCTTTCTTTTCAAATTGG
GCCGTTTTAGTAGCATCATGGTATTAaccttaaatatttttttgcgtacc
gtgaagtcgggtaacttgcatcagtggagactAACATGCATAGTATCAGG
TATCAAAGATTttaatgctgacaagttgacagaACACATTATTGACaaaa
gtaatccctgagagattACCTGAAAACTTAATTTCTAGTTTGGCAAATCT
CCACAAAGATTAGCAAACAATCAttttttcccacttacagcttttctctt
tgatcttttattgttttttgtttttttgttgattgCTTAGCTTGCACCAT
CGACAACTCACACATCATTTCTTGAAAGGGAAACACGGTTTTTCCCAAGC
TGTAATGTTGACATACCttgttttaatttaatttaaagtaatgataactt
aaaatttaagtcagttagtggaagtactttgATTTGTGAAGCGTTTTTac
gtcacatagaacaaaagaaaatagtaaaGGAACAAAGGACTAacccatag
ccaccatttctcaaccatggggaatcgaccattcttccccataaatgcga
TAAATGAAGAAGCTTTCGATTTCTGATTGCCTGTCTTTCTAATCTGCCAG
AAAGTGTTACCGTCAACCTGCTCTagcttgggactatctgacaaaacatt
ggacggcaattcggccaccatttcaccgaacctccgaagtcatttgattt
gagttaatgaacggggtattaaaaatacacgatttctcttttgcacctaG
TATGCTTTTAAATCGCAATATGAAAAAATCCGTATTGGAACACACGGGAG
TGTGTCTGGAaggaaaaatttgacaaattttttgtcaaagacagttagga
acatttgattcaaaaatctttggttttttgaaaagaataccctccagtga
acataaaatattattacgaaaacgtttgaaaattcgttaaaaaaagtcta
ttgatcaaaattgacaatttcattttttgcttgtcgaaggttggagcttg
cccaagcacattacaggcaaaatttaaaaatacagttgcgctctctaatt
cgacgttctactattcgataggctcccttattcgatgaaatttaaagtcc
ccgtcaacagaAAACTCtaataaacgacgctcccttattcgataagctca
cttattcgatgaaaatccgattccccttgaagaacgaattagagagtgtc
aactgtatcaATTTTTGCTCTtagacttcttaaaaaggattttcagactt
tttcgtaataatattttttgttcactgcaaggtattcttttcaaaaaacc
aaagatttttgaattttgaatttttatttttcgatgacgtcatgttTTAT
ggcgtcattttgccttatttccttaatatctcctgatatattcattttca
gatataggttgtgacctttttctttatcagtatttcatgctctttcgaat
gaaacaaacaattttcaattctgatgactttttattttggttgccatagt
aaccaatgacgccagtttccatggcaacgggtggtcacacccggccccac
ctctcaaattttgatcttctacattcaaggaacaatattcaatcataaaa
tccctttgcacaagctgctgcacacaggaagctttttcgcgacatagtgg
cccctactaTACGTCAAACCACGCagtgctgacttttagttttatgactt
gttctcactcgtttggtttccataataaaaagaaagtcgttatttTGAAC
TGTGAACATGCTTAAAATCgaggtacttccactaactaTAAGTTAGCCTT
TCCTCTTTAGGCGAAAAGCTTAGATAACATTTTTAGCTTTCTCACAATCT
TAATTCAtacttgtacacttttttttgaaactccccagggctcgaaataa
cggtcggacatcagacattgtccgacccaaatagctttatgtccgaccca
aaaacattaattttcaagctaaagcaatcCTGATcagacattttgtccga
cccacttaaaatcgttatttcgagtcTTGTAGTACTGGGTAGTACTACAA
ATATATTTCAGACaaccaaaattattttaaagaagaaacCCTAACTTACT
AAAATAGTAGAAAATCATCTCATTTCGACAGGCTGATACATGTTAGAATT
CTCGTTCGAATGATACAGGGGCCGTATAAtgaatctttatttttctttag
gcTGTCAACAGTGCTATGAGATCAGGGACTGACATTGAGACATCaaaaaa
aTGTAAGTTAAATTTGTACCTAATTATTAAAGACCtttttttATACagca
tatttttttgttgatgaAAGGAACTTTCATAATTTCACTTTTAAATATCC
CAGACTATGTGGGTCAGAACCTTGGGTTTTTCCAAATTGCTTCAGTCACT
TTGCCgtcctcaaaaatgcaataCACAAACTCGCTTTCATTACCTAGTTT
ATGTATACGTGTGTGGCTTTTCTGCAATGGAGACGCTCatgttctaattt
gactagatgcTGGCCAGCTGAGGACGACAGTAAATCAACACTTtcaccgt
cctcgattttgtgggTACATAAACTCCTATCATTTTCCTTTCAGACGGTG
GTGGTGGTAATAAGCAACACATGGGATCACGTGACTCAGCTGCCGTATGC
CGAGACACAGAAGAAACCAAAAGTATGTTTTATCTTTGACAATTGTGTGT
TTATTGCATTGTGATATTCTTTTTCCAGCAGTGTTGGAACCCGCCTCCCC
CCACCTTAAAAATACACACAATTTAAAGATAGAATTAGTTTTCTCTCAAG
CTTAGGGAgttgtcttttatttttatggAGTAGAGTGTGCTCGTTGCTTG
ATATGTAATGTACGTATCTAATGTCAACAACCCTTTTTAACCCCAACAtc
cttttttagttttttttatcggcaggtacaaaatgcataagacataatgc
atattgcataatgaaTAATAGTAtagtgtaatttacagaacgattttata
ttttctaaaactctcctttgtagaggctaaaaccgcgaaaacctctttag
aagagtttcttcaGGTTTCTTAAGTAAATATTCCAATCAGAGGaatttcc
ccagacatgatatttacttttcgaatccgaacgaaagagaagacattcga
atcataacaacaaagggttttccgtcagcatgAATAATacgaagatgcaa
cagatcagaaaggttcCCCCCTTCTTCCTTCTctaaaaaaggtaaacaca
taaacattcgaaaatgtaaaaagattcgaagtctattttctttgatctag
ctttcgcatgaagctctttaatttatattggctagATACTGGATTATCTa
gcaaaaagcattcacatggttaatgctttgtaagaagGAAAACCCGTTgc
aatttattagcaattgttcgaaaagatctctgagaaaaccagaataaaga
tcttgctataaaatttacgtttttgagttagaaaagtaatatacggagaa
gatattttcgtgttttttctacactttactacgttctgtaaaataaaact
atgaaaatcataatggcgacaagcattttcagtggatcacgGATTTTCTT
Taccatccaaaattcaaatttacagcattctaccctttattttctggtag
aaaatggtatatttgttttgttgaaagtattatctttcataacttcttat
tatagcctctaaaattgacatttttcaaatattatacattatgcattatg
caatatgcaatATGTTTTATGTATTTTGGATCTGTCAGTTTTTTATATCT
AACTACATAAGCCTTGTGaattattttctcaaataaaGGGATTTGAACGA
GGAGAATCTAGAGATGAGAAAGATTCTTATTCAGCGATTCCGATCTCTAA
ATCCGAATTCTGAACTCTAAAGAAGAATTACAGAACTAGGAGAGGGTTGT
CGAGGTTAGACTAATTTACGGTTTGACTGCTACAGTGACTGTATCAAGCT
GCACAAATTGTAGGTTAAAACTCTAATTTAGGtcttgataataataataa
taattttcaaattgttccTTCGTGTCACTTTGCTCAATAATTCGTTTAGA
AATCTAACGTTTTTCGTTTTCGTGTGCCAGGGAACCTATATGTGCTAACT
CACTCCATCACTCCacttacatttttgtttttctttttcctattAGTCGA
AACGGTATCATTAGATGTCGGAAAATTAATACAAAAGGGACGAACGGAAA
AAGGATTAACGCAAAAAGAACTGGCTACAGTAagtctttttgttgttgtt
gtgatttATTTTGTATCTTCATACATAGATTTTTTGTTCTAGTGTCGTAA
AAATATGGCAGTGGATTCATCAGCTGTTGGGAAACGTCTTATCGATGAAA
TGGAAGGGGGATTTTTcatagatttgaattttggaagTAGAGTAGCGAAC
ACTCGttaataatttatttcaatatcTTCTCGTGTTATTGCAAttttatt
atgaaaaatttGTTAACTGTATAACCTTATTGTTGCACTTGTTAGCGGAT
CAACGAGAAGCCGCAGGTGATAAACGACTACGAAGCTGGAAGAGCTATCC
CAAATAATCAAATCCTCAGCAAGGTCGAACGCATTATCGGTAGGTCCCAG
CCTCTTCTAATCTACTGTATATTGATTTCCAAAAGAAGTTTCATACACCA
CCTTTTTAACTTTCTCTGTGTTCTTTGTTATGCCGTTAGGGGCAAGACAT
AAAGTActtacgcagtgaagggggaaGAGGGGGcttagcaaaagcgtacg
tctattgtttgaatgatgtcatttttattgttctctgtgtacaagggggg
agggggtatcaaataTTTAGAAAGCTTTGTGAACGTACTATAATATGGAT
TACCTGACagtacacctttttgaccggaGCCACCAATTtacgcgcgggca
tttttttgtccgctttatcccactaaaaccgtcccagtccttttttcaca
cctatagacaatagaaaaatatgtcaaaaaaggattggatggatagtggg
ataaagcggacaagaaaatgcccacgcggcaattcgcgactacggtcgaa
aaggtgtattttcgATAGCGATGTTAAATTGACCGGCTTTGATTTAGGCC
CTGCACTATGCAGAAAGAACGAGGCACGTATCAGTACGTGTCTTTTGATT
CTTTTGTAACCCCCTAGTATGAGTTTTGTGTTCCCATACAAAGCGCCTTA
GACTTTATTATTTACTGTATTGAAcctcaaatttttcttcaacatTCAGG
CTTGAAACTGAGAGGCAAAGACAAAGGAAAACCTTTCGGAGGACCAAAGg
gaaaaaagtga Coding sequence (CDS) from alignment at sc0000022_pilon:479938..485448+ >XLOC_044837 ID=XLOC_044837|Name=XLOC_044837|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=894bp|location=Sequence derived from alignment at sc0000022_pilon:479938..485448+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAAGTAGGATGGGATGATGTCACTTATCTCCGGAAGAAAACACC
AAAGGCTGCTGAAGCTCGATCAAGCAAAATGGCTGAAGTAGGATGGGATG
ATGTCACTTATCTCCGGAAGAAAACACCAAAGGCTGCTGAAGCTCGATCA
AGCAAAgcTGTCAACAGTGCTATGAGATCAGGGACTGACATTGAGACATC
aaaaaaaTgcTGTCAACAGTGCTATGAGATCAGGGACTGACATTGAGACA
TCaaaaaaaTACGGTGGTGGTGGTAATAAGCAACACATGGGATCACGTGA
CTCAGCTGCCGTATGCCGAGACACAGAAGAAACCAAAAACGGTGGTGGTG
GTAATAAGCAACACATGGGATCACGTGACTCAGCTGCCGTATGCCGAGAC
ACAGAAGAAACCAAAATCGAAACGGTATCATTAGATGTCGGAAAATTAAT
ACAAAAGGGACGAACGGAAAAAGGATTAACGCAAAAAGAACTGGCTACAT
CGAAACGGTATCATTAGATGTCGGAAAATTAATACAAAAGGGACGAACGG
AAAAAGGATTAACGCAAAAAGAACTGGCTACACGGATCAACGAGAAGCCG
CAGGTGATAAACGACTACGAAGCTGGAAGAGCTATCCCAAATAATCAAAT
CCTCAGCAAGGTCGAACGCATTATCGCGGATCAACGAGAAGCCGCAGGTG
ATAAACGACTACGAAGCTGGAAGAGCTATCCCAAATAATCAAATCCTCAG
CAAGGTCGAACGCATTATCGGCTTGAAACTGAGAGGCAAAGACAAAGGAA
AACCTTTCGGAGGACCAAAGggaaaaaagtgaGCTTGAAACTGAGAGGCA
AAGACAAAGGAAAACCTTTCGGAGGACCAAAGggaaaaaagtga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000022_pilon | genome | sc0000022_pilon:479938..485448 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 388-447:5452 |
| Aaloc | 292-384:4696 |
| Aaloc | 211-291:4349 |
| Aaloc | 133-207:2747 |
| Aaloc | 79-129:2351 |
| Aaloc | 1-78:1 |
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