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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000022_pilon:530149..535908+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044834 ID=XLOC_044834|Name=XLOC_044834|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5760bp|location=Sequence derived from alignment at sc0000022_pilon:530149..535908+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGGAGATGCAACACCAATATTCCACATCCCTACTGACACCCACAAGCT
GAGTGATATCAGAGAATGGCATTTTCCCAATGGATCAAATACCGAACAGA
GTCCCGATCAATATGCTGTCCAAATCAAGATGCAATATCAAAAGGAAAAA
GGTCTGTGTTTGCTGAATTGTACTGTGCCGTAAGTTTAAACAAAGCGCCC
ATCGGTGTTAAAGCTATGTCATATTTAAGTcttttattgtcgactcaaat
aAAATCTGCAATCTGGTTGGTTCAAAGgagtaaaattaaaataatatata
aattgAGGAAAAGATACTGTTGCACGGTCACTGACACCTGAAGCTGTGGT
ATGGTTCAAAGtgtgttttgagatttttgaagacaaaaaaattttacagg
ggaaaattatgacataattaaaatagaaaattagaattttaattttatta
ttgaCGCAAACTTTAGTTGGCGAGGCAGTAATTTTAACTAGTGTTGACGG
ATTTTTCTGCTAAAGTTTCCGCCAAAGCTAGTCATTGCCAAAATCAGTTC
CCCTAAGgtaatttctttctttgttgTTCAGGTCCTGAAGCTCAATTTTT
GTTTATGAATGTTAACGGttttgcattgaattttgaTTACTCGCTATACA
AATGGTTATCGTTTGCTCCTACTAACATTCCACCAACATCGAAGACTTCA
TTCGTGGTGCGCAGGAAAACAACAAGTTCGCTTTCTTCGACAACTCCGAG
AAGAGCCAAATCATATGCTAGAGgtactttttcttattttctattAGCTA
TTAGTAAAATGACAAAACgttagtaaaatgtaaacaatgcGCAAACGACG
TGTcgtaaaacaaaacaatttaaaatcactcgtcataaaaaagaaacaat
taaaaaaatcgaaatgctttgattttttattttaatatttgttttgattt
cgttttCGTATCACACTCTATACAGGTTGTTTTAGATTTCATATCTACTT
TGATCTTGATTATTAGCATAGtgagaaaaaattattaaaatatagTCCCA
ATGCAATAAGATAGatgacagataaaaaaattcactccatttaagaatta
gtgaataagttgTTCTTTCAGAAAAATGAACTAAAAATAAGGGTGTGGTG
GTTAGTAATCCTGTAACCGACCATCCAATAAAAGCAGGTTAAGCCGCTAC
ACCCAAAAGAGCAACATGAAGATCAATCTGTGAAGTTCATCAACTTGCTG
TACTGTGGTGTGTTTGCCAGTCACTTGCCTGCCTCGCACTGCAGGAGTTG
AACATTAAAACTTCCAGCCTAGTGGTGTCGCGAGCCTCGGGCTAAAATGC
CAGcgaaaaagtacaaatttaaAGACCTTAACATCGTCACACAAAATGTT
AGAGGACTTAAATCAACGACAAAGAAACATGTATTGTTCAGTCAATTCAT
CGCTCGAAATTTATTCGCAATGTGTCTACAAGAGACATGGACTAGTGATT
TCAAGAACTTGGAATACAAACAATGTATGCTATTGACCAATGGACGACCC
GTATCGGAAGTCACCAGTAAACGAGGACAAGAGGGAGTTGGAATCGTTCT
CAGTCGAGACGCCGTGTTAGCTTGGAAAGCAGCAGGTTCAGAAACCCATG
TTGATCTCGGTTCACGAATCATTGCTATACGATTGTTATTGAAAGATGCC
AGAGGAAAGGATATCGGTATATTTCTCGTATCAGCCTATTCACCTATTGG
AGTGGCAAAAGAAGATGTTTGGAGTGAATATTTGAATAAACTCGATATTA
TTATGAGTAGAAAGCGTAACTCGGACGTTCTTATAATCGGATGCGATTGG
AACTCAAGTTTGGGAACTTCTTATCGAGACAGTGAATCTATGTATAAAAA
CTCAATTGGGAAGTTCGGTTTAACACACAGAAATCTCTCGGGAATACGTT
TCATGACCTTCTTAGAATCTCGTAACCTTCTTGCGTTATCTACCTACTAC
CGTAAGAAATCATATACAACATGGACCAACCCGCGTTCGAAGCTTCCTCA
TCAAATAGGTCTGGTCTGCTGaaagttttgccaaaaaaaggAGACCTTAG
TCTACCCGGCAACTATCGTGGCATCATGCTTTTGGAAGTTGCTTACAAAA
TCCTTGCCATACTTATCCATGATCGTTTACAGCCACTTGTCGAATCTCTA
GACCATGAAGCACAATGTGGCTTCCGCTCAGGAAGGGGTTGTTTAGACGC
TATTTTTGCTGTGAATATGGCTATGAAAAAGCGTAGAGAACATAGTAAAG
AAACATGGATTTTGTTCCTTGACTTAGTCAAGGCCTTTGACCGAGTCCCG
AGAGATATGTTGTGGGAAGTGTTAGAAAAATTTGGCGCACCCATCAAGTT
AATTCGACTGATAAAATCACTTCATGATAATTTCAAAGTAgattttgaaa
tagaaaattgcAAGCATTCAATCAACTGCACCATCGGAGTTAAACAAGGG
GACATTCTTGGGCCTGTACTCTTCGTTGTTTACATAGCCGCTATAATGAT
CATTTGGCGTAAACTACACAATCGACCTCTTTGTATGTTCAGAACCAAGA
AGGATTTCTGTATGACAGGGAGACGAGTTACTGCCTCCGGAATCGATTTC
GACTTCCCTGACTCAGAGTACGCAGATGATACAGCCGTGTTGTTCGAATC
CCGCATCGATCTCGTCATCTTCATTCCTCTACTGCTTGATCATTTCAATC
GCTTTGGAATGGAAGTTCATGTTGGTGATATATCTTTACCCAATAAACCA
TCAAAAACTGAAATATTGTTTGTTTCTGCTCCAGTCAAATCGTATCACGA
TTCTAATACGTTTGACAATACGAATCTAACATCAATCGACTTGGGAGATG
GGAAATTTATACCCGTAACCGACCGCTTTTGCTATCTTGGTAGAATCATG
TCACGCGATTGTACAGACAATCTTGATATTACTAACCGTATCAAAAGAGC
TAGCAATGCTTTTGGCGCTCTAAGAAAATCGATTTTCTCCAATGCAAATG
TCTCCAATAAAGTCAAGGCATCTGTTTATGAAAGCTTAGTACTTCCGATT
GCTCTTTACGGATCAGAATCATGGAGTCTTACAGAGAAGTTATTCAATCT
TTTACGTATGTTCCATCGTAGTTGTGTCAGAGCAATGTGTAGAGTTAATA
TGTTACATGTCAGGCGATATAGAATCTCAAATGAGGAGTTGTTGAATCGC
ATTGGCTTGTTGTCTATTGATAGTTACATCACGAAAAGGCAGCTCTCATG
GGCAGGGCATGTTGCTAGAATGAATTTTGATCGTCTTCCACGGAAAATGT
TATCGTCATGGGTAAGGTGTAACCGCCCAAGTGGTTCACCTGAATTTACT
TATGGCcgtggtttgaaaaagtgtaTGAATAAGGCTAATGTGCCTGTAAT
TAATTGGTTTGATTTGGCGCAAGATAGAATTGGCTGGAAAAGAATGGTGA
ATGGTATTGTTGTAATATGATATTATCTTGGTTGTTTTAGTAATCTAATA
TTTATTATGCTACTAGTACTTTTTCTTCCTTTGGCTGGCGCTATGATTTC
CTAGGActattttatttcaatatatCTTAGATCTAGGCCGATTCCTTTTG
CATTAGGACGGATCACTCTCTCACTCTCTCCCAATGCAATAACTAAGTGA
GAACAAAAATGTACCAAAATCTGACTCATTGCAGACTTGGTAGCTCATTG
AGCAATGAGAACTCTTTGATTTCTAAAACAATGATATACttacaattttc
caatttcagtTCGGACAGGCTCGACAACTTCTCCTTCGCACCATTCTAAA
GATtcgaaagattttcaaaaagaaatccaaCCTACCTCTTCCAACAAAGA
AAGTTCTTTCGAAAAAATGTTGGTGGAAAAGATAAATACTTGGAAATGCT
TCCAAATCAAGGTACgtcaaaggttttgtttttaacttaatttacaaact
ttttcacattggattgactcagatgtggagcaagattggtcagaaagagg
aaaagaaaaacatacctctggcgatataacgttagttcctagcgggggag
ggactatattttatgtttaagtaatgttttgtaatatatgtccgtagtgt
acacgtgtttttgtttcaataaagaaaaaaaaaaaaaaaaaacaacattt
ttttgcttatatcagcataatataacaataggcagacactgtccttatat
gaaatatgtgtctgatatgaaacgagaacacttatgtaaaaagaaaacct
ttaaaacttaTTCAACTCACAAAGGAATCGTGTACAATTGAACCACTAAT
CTCTAACTAATTGACTGGATTGGACTTCCAATAATAACGGAGGTGATATT
TAGCTTTTGAGCTGACATGATCgccattttctttcatttctggTTGTCAA
CCACgggattcgaatgttttaaattttaaacgcTCTAAAATTAAACGTTA
AATAGAAAACAGTATGGCCTTCATAGACTACAAAACTAGcatacaatgct
ggacaaaaggttggtagacttctgcaatatttgcaaaatacttcaatatc
gatcaaaaacaagttcccaagaggctttgaaagtcacccactgcagtcta
accgcaagggcaaaccacaagggcttgattaactggcttacaccagtatc
aaaacgctgattttttgcttgtggttccctcaaaagcaattcaaaagcaa
tgcaacgacttcaaaagtgtttttcttaacttccatcccctttcagacac
atagaagagtcattttgctctatttctcatcatttttcactgaaatttca
tttgtctacaaccttttgtccggcattgtatACTTCCACTGGAAATCTGT
GAGTAGTTGGCCTATCTAGTGAATAAAAGAATAAGATATCTGTAATTCAG
AccaaaaagaactttttatttttacttactgAATCTTATTTTATGGTTTC
TAGGTATCAATCGAATCTGGTGTTTTGGTTTTTCCTGAGAAAGCGTGGAA
TAAAGGTAACAACATTTTATTTAGAACGCATCGGTTGCAATGACgaaatt
tttattgatattATTTGCCTCATCCTGATTATGAAAGCCGAAACAGTAAG
TCGTAGCAGCAGTGTATCCAAAGTAGTTCAAATATCGGACGGTCAATTTG
TCgttcataaaaaatgaattcaattaAGAAGACTCAAATTATCTTACCAA
AATCGGATCGTTTCAATTTGGGCTACTTTCAACTTTCGTTCAACTTCTCA
ATCAATTGATTATTTTTATCGTTAATTTTTAGGTTGCTCTCTAAACAATG
GTGTCATATCGCTAGTGCGTTCATCCATCAATGCTCAAAATCCAATACAA
AACTCTGTTCTCATCTTATGTACTCCTTGTATCACATTGTCAAGCTCCCA
GTTGGATCAACGTCTCTACGAAGAGCCTTTCCCATGTACGTCTAATACCG
CGACAGCAGATACACTGCCCTGGACAATTACACTGGACAATTTCAGCATG
TTTACTTTCCTACCGAAccagaaaaaaggaaattacATTTGCAAACCACT
GTCATGTAAAGTTTTCCTTGCTGCGTCATCTAATGAAAAATCAACGGGTA
GGAATACAGCTGTTTTCATGAACAGTGACAAACAACTTACAAGCTCGTTG
GCACATGAAGGCAAAGTGTTGAATATTGGTTTTGTGATTCATGCAGATTG
CACCAGTTGT Coding sequence (CDS) from alignment at sc0000022_pilon:530149..535908+ >XLOC_044834 ID=XLOC_044834|Name=XLOC_044834|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1950bp|location=Sequence derived from alignment at sc0000022_pilon:530149..535908+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGGAGATGCAACACCAATATTCCACATCCCTACTGACACCCACAAGCT
GAGTGATATCAGAGAATGGCATTTTCCCAATGGATCAAATACCGAACAGA
GTCCCGATCAATATGCTGTCCAAATCAAGATGCAATATCAAAAGGAAAAA
GAGAGGAGATGCAACACCAATATTCCACATCCCTACTGACACCCACAAGC
TGAGTGATATCAGAGAATGGCATTTTCCCAATGGATCAAATACCGAACAG
AGTCCCGATCAATATGCTGTCCAAATCAAGATGCAATATCAAAAGGAAAA
AGGTCCTGAAGCTCAATTTTTGTTTATGAATGTTAACGGttttgcattga
attttgaTTACTCGCTATACAAATGGTTATCGTTTGCTCCTACTAACATT
CCACCAACATCGAAGACTTCATTCGTGGTGCGCAGGAAAACAACAAGTTC
GCTTTCTTCGACAACTCCGAGAAGAGCCAAATCATATGCTAGAGGTCCTG
AAGCTCAATTTTTGTTTATGAATGTTAACGGttttgcattgaattttgaT
TACTCGCTATACAAATGGTTATCGTTTGCTCCTACTAACATTCCACCAAC
ATCGAAGACTTCATTCGTGGTGCGCAGGAAAACAACAAGTTCGCTTTCTT
CGACAACTCCGAGAAGAGCCAAATCATATGCTAGAGtTCGGACAGGCTCG
ACAACTTCTCCTTCGCACCATTCTAAAGATtcgaaagattttcaaaaaga
aatccaaCCTACCTCTTCCAACAAAGAAAGTTCTTTCGAAAAAATGTTGG
TGGAAAAGATAAATACTTGGAAATGCTTCCAAATCAAGtTCGGACAGGCT
CGACAACTTCTCCTTCGCACCATTCTAAAGATtcgaaagattttcaaaaa
gaaatccaaCCTACCTCTTCCAACAAAGAAAGTTCTTTCGAAAAAATGTT
GGTGGAAAAGATAAATACTTGGAAATGCTTCCAAATCAAGGTATCAATCG
AATCTGGTGTTTTGGTTTTTCCTGAGAAAGCGTGGAATAAAGGTATCAAT
CGAATCTGGTGTTTTGGTTTTTCCTGAGAAAGCGTGGAATAAAGGTTGCT
CTCTAAACAATGGTGTCATATCGCTAGTGCGTTCATCCATCAATGCTCAA
AATCCAATACAAAACTCTGTTCTCATCTTATGTACTCCTTGTATCACATT
GTCAAGCTCCCAGTTGGATCAACGTCTCTACGAAGAGCCTTTCCCATGTA
CGTCTAATACCGCGACAGCAGATACACTGCCCTGGACAATTACACTGGAC
AATTTCAGCATGTTTACTTTCCTACCGAAccagaaaaaaggaaattacAT
TTGCAAACCACTGTCATGTAAAGTTTTCCTTGCTGCGTCATCTAATGAAA
AATCAACGGGTAGGAATACAGCTGTTTTCATGAACAGTGACAAACAACTT
ACAAGCTCGTTGGCACATGAAGGCAAAGTGTTGAATATTGGTTTTGTGAT
TCATGCAGATTGCACCAGTTGTGTTGCTCTCTAAACAATGGTGTCATATC
GCTAGTGCGTTCATCCATCAATGCTCAAAATCCAATACAAAACTCTGTTC
TCATCTTATGTACTCCTTGTATCACATTGTCAAGCTCCCAGTTGGATCAA
CGTCTCTACGAAGAGCCTTTCCCATGTACGTCTAATACCGCGACAGCAGA
TACACTGCCCTGGACAATTACACTGGACAATTTCAGCATGTTTACTTTCC
TACCGAAccagaaaaaaggaaattacATTTGCAAACCACTGTCATGTAAA
GTTTTCCTTGCTGCGTCATCTAATGAAAAATCAACGGGTAGGAATACAGC
TGTTTTCATGAACAGTGACAAACAACTTACAAGCTCGTTGGCACATGAAG
GCAAAGTGTTGAATATTGGTTTTGTGATTCATGCAGATTGCACCAGTTGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000022_pilon | genome | sc0000022_pilon:530149..535908 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 550-975:5335 |
| Aaloc | 496-546:5004 |
| Aaloc | 346-495:3812 |
| Aaloc | 154-342:584 |
| Aaloc | 1-150:1 |
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