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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000022_pilon:536155..544758+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044833 ID=XLOC_044833|Name=XLOC_044833|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8604bp|location=Sequence derived from alignment at sc0000022_pilon:536155..544758+ (Clytia hemisphaerica_ch_hm2_pilon) CTAGTATCGACTACCACACTTAACATCTACGAGTCATTTGTTCGCTTCCA
ACCAGTTAACATCCACCAGAACGACCAAGGGGACATAAGATTACGTGAAG
ATAAATCTTCCATACACGAAATGGACACAACACTCAGTGTCTCTTCTGCT
TCGACAAATGATTTTCCCGATAACTTTAGCATGATGACAGATTCATCTGT
GTTCTCAAAGAAGGTAGGCATTTCTGGACATTTGATCGTTTATGATAAAA
GATTCTCTTCGCTTAATAGTTGACGTCGTTACAcgattcttttataaaaa
cgaCCAAAATCTTTTGATGCCTTCgggttcttaactttttgagttttaag
cctaaaaatgttcttaataagTTCTTACTTTCAccgttttttgagtattt
ttgtccgttCTCCTAAAagtcgggtgttttagagtctgcaaagccttaaa
atattgtTGTATCCACTGAAGCCTCATGTCCTGATATAGTtcgttcttat
acaaaaaattgTATTGTCGAATTTCTCTGATCTTCGAATTCGAAGTCTCA
TCGCCTTTTATTgctgtgtttgtttgtttgtccaGAAAATCTATCACCAT
CTGGTTTCAGTGGTTTTTAAAAGGGTATGAGAGAAGAATgttaaaaaatc
atttgtttgGTAACGGTTAATATATTGGTCAGATACATAATATCATTTGT
ATTCACCTTTGTCTCTTTTATACAGAGTGTCACAAAGGaagtttcatttt
cactttGGATACAATTCACCATTCCTAAAGTGAAATTATCAATGTCTAGC
AACTTTGAAATGTCTGGTTGGTGTTATCATTTGATCTCTGACCTGGATGA
ATTGACTTTCGCTTTCGATTACCAAGACACAACGTTGGAACTGACCAATA
AGATTTCTTCACTTTTAGTATACTATTCTGCTGAAAGGTAACTGCGagac
ttttttgagttttagctcacaagttttcagcactttcaatttttatgttt
tatcaagaaatcttttttatatttttcgatttttgataaagtttttgttc
cattttagttttttgggttcagttataattttgACAAAGAACAGACAGAA
AAACatagtttcaaccaatcaaatttcgtactAGCCTATTGCATTTCGAT
TTCGTTGTTGTGATTATTCCTGTATACATATAAACTTCTTTATAATTTTT
AGCACCGACGAAACAAACCCACCATCATCAAAGAAAGGcatcattttttg
tcaaaaagaaaaatcggAGGCTTCACACTCCAAATCATTCCTTTCATTGA
CTTACCGCCGCTCTAAACACCATTTGACGCCCACGCCCACCTCCACCCAC
AGCAAGCTCGAGGACACAGACCTTAAATGGACATTCTTCGGTCCAATAGA
AGACTCGATATCAAAACAAGAACTCGAAATCTTCATTCAATCTTTTGATC
TTGTCTTGATTGCTAACCCAATCATTTCAACAATGCATATTTTCGTCAGC
TCATTGAAAACCTTCCTGGATCGATACCAGAACATCCGAACACCTACACT
TAAAGAACCATCAGATCGACCACACTTCGCCAGCAACTACATCAATGTCT
GGCCCATCATCAACATCAAATGTGGAGATATTCGGCTCATTGCCCCTTCC
CAGCATATCACCTCGCTTTCCAAAGATGAGCTGGTTCTACTCTTACATTT
TCAAGCAATCGGGATTTCATCCCAACCCATTAATCCGATTCGGAAAACGG
TTGTCAATAGAAACTATTATAAACGTTTGAAAGAAATGTATCGGGATTcg
ttgaaaaagaagaagctgTGGAATGTTCAATATCAGTTGGATATCACCAA
TGTTGGTCTGTGTACAACTAACTGGAAGTCGGTGCAATTGACAATGTCAG
ATGATATTGTACCAACAACCAGTCAAAATCCAGCAGTTGAATGGAACACT
CAAGCAAGGTATACAGTTGTTGTCGTCTACCCCCCTACCTCAAGTCAATA
TTTCTGTTTATTCGAACAAACCCTTAAACTTAAAAGTGTGAACAGTTTCA
TGTGATTTAGAGAGAGTTATAGAAGAGTTATATACACTGAAGAAGATGCA
AACTAGCGACTAACCATGACAATCTGTGATAAAAACCCAATATACATTAa
ggaagaaagaaataaaaaaaaagtaaaaaacaaaaggaatgcACAAGACA
CAAAAGGAAGTGATAAGTTGAAGACCGAAATCTGAGATCAGGTGCGGTAC
CTTGAGTAAGCATCTCCTGCCACTCTAGAGTCACCTGTTAGCTtaacaag
aagaaagaaattaaaacatagGCACAAGTAGATTTAAGTACAACAGAAAA
GGAAAGGTTGAAAAGTCGGCCTAGAACCCGGTTTGGCGTCCTGTGCCCGA
GCGGCCGCCTGTAAAGTTACGGGTTAACAACCCTAGCCTTCACATGTGCA
ATTTTACTACTCAGTTTTAGTTTACTTGCTATTCAACCTATCATATCTTG
TTATAAAAACACTTACTGATTGTGATAGTAGCTCTTGCTAATTGAACCAC
AAGTCAATCGGGTTATTtggttatttttttgttatataaGATTTTGTGAC
ATTTCACTTTTAGTACTCACGCACCACGGTTGACAGCTATCTTTGTTGGT
TTCGATTTGAATGCAACATTCGCTCCTTCCATTCTCACTTTCCATGGCAA
TAAGGTAACGTAATTCCACGTTCTtccgaaatatttttactttcttCTTT
TGACGAGAGAACTTAAAGGACAGCATCTTATGTATcttctattctattct
atttCCGAGCTGGACtgacctgagatcagattgtggttgttttctgtcCA
CCACACTGAAGCTTTAAAGgaatgggtgaaaacataacaatctgacgaat
atacaatctcgaaatcgtaagaaccgcgttcgtctaaaaggactggggat
gacaaaaaagttgcgtgattgtgtttatgaatagggcgccgtatcagttt
ttgactttctggcgcacaacaagattcttgttgtaaaattttgcgTGGGA
GGACTATCTTCCTcagatgtttaatttttaagcgctttcagaggtttacc
gtgtgCGTAAGAAAACtgtgaacagctgttatcaggttaagcTTGGCAAG
GTCTTGGAATGACTACCTTTAGAATTTAAAACTATTGACTTGATTAGtac
ttgtaatttttttttttaccagcGATAAATTAAGAACAAACAAATAAATG
AAATTAATCATTcccttacacagcatttttaaattaaagaaagagCATTT
TTCGCCGCGCCGAAATACTTTTctttattctgctttgtcagccgGAGGAG
ACTTAGGCAAAGTAGCCCCCTCTCCTCCGGGATTAGCTaaagaatctttt
tcatttATGCTCGAGGCGACATAAGTcgttctttctttctttaaaaaaat
gccGTTTAAGTAAATGGTAGGAAATACGTTATGACCTttagaaataatta
ttttttattatctgGAAAGCAGGTGCTGGAAAAGCAgaataaagaataaa
ataatttgTGCTGGATATGTGCAGATGaaaagggtcggttttttctcctt
ccaaagttaaaaatcagaaaattttaaaatagtttctctaagggtcggaa
aatacatgattttttaggaaaatcttttgatttcgagggtaaaaattgta
aaaaagtctaaaggtaagatatttttcaaaaatcgaagaaaattttcaga
aattttcaaaaaaggtccaaCCACACATATAATCCTCTTCCGTCAACCCC
AGTAGTACCCCCTCCGGGCAGTTAATTtagttaccttatcggcccttttt
acgccagcccttattagggccggtgttaaaagggccaaaattttacaatt
tttacctaaaagcggcgttattttttgaccatttttttacaatttaaagg
attttaggcatgattaaaTGATGAAAACTATCCGtttttttACTCTATAT
CCAaaacttcacgaaaatcaatgattttcattGGAATTTTCGACAGTTTA
ATACcgaaagatgacattttaatgtaaattttagtttataatTACGGTTT
TGAAGCCGGAGtagcgatttttacaagttttggcgttatttacggcccaA
ATTGgtgtaagcccaaaattaggctgtggtgGAATAAGGggcggcgtaaa
aggggccggcattaaattagggccggcgtaaaaagggccgataaggtaat
tttGCCTCAATGATACCATACTAATAAAAAGAACATCGAACATCGCTGCG
TTGCGTGATGTTAACATGGTGGAAAAAGCTACAATCTAATCTCCATCCCC
TCTCTTCGTAAGTAGCAATGTCGAAGGGCCCGTCCATTGCTACTGGAGCC
GGGTAATTTCTAGCGATTTCCAATGTTTTTCATATAAATAAATGTTCAAC
ATTGCCAATCGTTATACTATTGTGGTATTAAGTTAATGTCTTATACTCTT
TgcgatcttttgaaagaattcaCTGCAATCTTCCGGAGTTTTTTGTCTTT
ATACATGTAAATGCAAGGGTTGGCACAACTATTGCCAAGAAAAAACACAT
TCGTAACTTGATAAAGGTAACCTTCATTCGTGACACCAAAGGAATAACAA
GTGATGGAGAAAAAAGTGAGACTTATACACGCGAAATAGACACCGATCAA
CCATAGTGCACGCCGCACCAACTTGTTGGAAATACGCTCTGTTGCCAGGT
TATTCGATTCTTGTTGGACAGTTGAAACGGCCATTTCCTCTACTTGTCTC
CTGGATTTCTTGAAGACATGCAGTATCAGTGAACAGAATACGGGCAAAGC
TATCAGAGTGATTAGAGTTCCTATGAATGAGAGAACGTTGATTGTCCAGA
CTAGTTCTTTGTCGACCTGAGAAGGCGTGAACGCTATCAATGGTAAAATC
CAGCACATCAGTATCATGGCTCGTAATCGTTTTGCAGTTATAACATTTTC
GAAAGTGCTTGGTCTTGATATCTTCAGATATTTGATCGCGGCTAACAACA
CGATGGTTAAAGACGAAGTCGAAGTTAAGCTTAAAACCAACATGCCGAAA
AGCCTGTTGGGGAACGAGTCAAATTCGTCGAAGGTCCAAAAGTTTAACCA
AGGATATCCAGGGTAAACAGTGATTGAAACCAAAGCATCACAAACAGCAA
GTGATAATAAAATCAGATCAATCTCATCTCGGTCGTTTGggttttgatac
tttttataaatactGAGGATGGAAATGACATTCCCAATGCCACCAAAGAT
TGTCATGAAACCATAACAGACAGTGAAAATGATACGAAATGTAAAAGGTA
AACATACTCCACACATAAAGCTGATATCCATATCTCTTGTAACACAGCTT
GACAGGACTATTTGATGATTTTCCAAACCCTTTTTCAAGTGTTCGAATGT
GGAAATAGTAGAGATGTTTCCCTTTTTGGCAATCAGTTGAATGTACTATT
TGATGAATTTCCAGATCCTTTTTCAAGTGTTCGAATTGAAATAGTAGAGA
TGTGTTTCCCTTTTTGGCCATCAGTTGAATGGAACACTCAAAATCGTATT
TCTACaatataaaagtgaaatctcaaaatgaaatcaggatattcattttc
atattttaataaTGTTCaaaaaaaGGGGAAGGGGGTTACATTATTTCTCG
ATATTGTCATTATTGCCAATCAGGACCGGTAAATTAGTCTCTTTAATATA
GCACTATGGTAGATGATGGAAATTACAGTCCTTTTATTCACGatcatttc
aaaaatcttttcatcaCCGTCTTATCATTATTATTTAGTACTTATTCGTT
GTTTGGACCATATGCAAGTAATTTGTATATTCTCATTCCAGAAAATTAGT
TGAACTAATAaataaagtctattcacgataagtgtgcgcTAAATTTAGCT
TTGCTTGTTATTTGTCAACCAATGcttcaatcttaaaaagtttataaaga
aatagaaatagaaatataaTTACCCCGGAATTTTACATTgtgtaagaaat
ttttcttatctAAATAGATAAGACTCGATTATTcattttgaaacgaaaaa
aatgTATACGGTGAGTGCTAAATTGATCGAGTCAAGCGAAATCAAAGAAT
AATGGCCGTCAAAGTAGTGAGCCAAACCAAAACGAGATTAGAAGACCAAT
GTGAAAAAACCTGCCTCCGGCGGTCTTTCATAACTAGACGGtgcccggcg
tcgcacgccggttaagctgtagctgaacgtaCTAAAAGTCTTTTGGATGT
TGTCTAAACCTAAGATAcatcatatcttccttcgtttcgagcgtaaaact
cctactcttcgggctatgagcactgctcttgttttgaatattgaaattct
ccagataaatcgcatgcgcactgaggttttaatgaaataatagagagttt
cgaaacctaagccaatcagctgtgttttaaacattcttttatttaaaatc
tctattgataaacatcttttgtgaatgttgtctattatgtttaaacctat
taataagcaattcccggtgggggtcactaatggccgcctatagcagtgcc
tatagaccaagagtaaggcctaaaagcctggatctgtctattctgtctaa
accaggctctatccgatctatcaatcaaaacaaacttatcgagaacaatc
gaaaacgaaagtgagacacagaaaacagacatacagactagctgctatta
atatatagagaAAAGTTTACAATCTAAACCTTACAAGGATTAGATTGGCC
ATAGAGCTTCAAAAAATACTTGGCTGTCTTTATTATTGGAAGTCCTATGA
CAATTGCAATCTCACATATTCTCTGAAATAGATTTTTTGCAAAACTGATC
AATAGTTAAATTTCTATCTGATATGACTCGCTCCAAAAGCAACCACGTCT
TCTCGAAGTGTCATCATTAAACATATAAGCTGTTTTAATGAGCGTTTATT
AGTCATTCGAATGGCCTTTAAGTGTACTGTATttggactgttgatatctg
atGAAAGTACTGACATTACGAGTCCCACACAATTTATGTAGGTCTTCGTT
ATCAATGACTAATTGAAAGTCATTATTGGGCTGTTCCACGaaaaaaaCCA
TACAGAGGGTGGACCTGGGTGgtcgaaccttttcaagtcaaaaaaaatta
ttaaaaatgtgtggataatccctggaaaatggcaaaatttgcaaaaatac
ccattggaaaaattcttttcgtaCCTTAAAGCGAGGGTGGACAAACTAAT
ATTAGTCTCttaacccctggaaattttgaaataactttttacccccttgg
aacaccccctggaaattcttctcagaTTACCCTCTGGGAATGTTTACCCC
CATGTATGGATATGAAATGATTCCATTTCTTTTATCCATACATACCCATT
GTCAGTGCCCACTTGTTTGAAGCCATTTCGAAACATGCGtctcaaaaatg
ttctttacgTAATGTCTAAACCTGTTCAATTGACTTGTGCTTAGACACCA
ATACTGACATGTATATGTCAGGCGACTTCGTACAAAACAATCCAGGAAAG
AAACACGAGTTCGTTTAAGTTTACGTGGAACTTTTTGCAGGAGATTTGAT
AATTCAGCAAATTTTACACAAGCTAATTAAATACGTTGACTTACTTCACT
ATCTCCTGTGCTGGGTTCTTTACAGTTCATGTAGGGCCCGAGGTATCGAA
TCACGttgacattttttcaaattaaaacctTTGAGGTTGACAATAGACGg
tatctttgaaaattcttaacagggcaattcgcgaaagtttatactcacga
aaaattctcaaaaaaattggtaatctataaaacctcgaaatcgaaatgaa
tatctttttttttctcagatggAGTTCATTACGTCATCAGCTGTCGAGTT
TCATTCTCCGAGGCCCATCGAGTTTCATATCAACACATTacaggtaaaaa
aaaattctacgaTTAAGTTTGATgtgatgaaaagtaaaattaattttaca
gttgagtctctataactcgaacccacACGGGGGTTAAAAGctaaggaaat
ttcaagttatggagaaaCGTTTACGAGGCATTGTTAACCAAAGGGACAAG
AAAACTTTTTATACTTAAGGAGaatcgagtaatagaggttcgaattaaag
agactcCCGTATATGGATTATACTTCGAAGCTTTAGGACAAAGgtatttg
actttttctttactAGTAACCATGGTCTGttggtaaaattttctttcttt
tcagttgacattgggctattccagaaatagtctgtacccgtTTTTTGAAT
GATAGAATCCAGCATGGTCAGTAAAATCGGGTTGAAAATaatccaagggg
gtcctgaaaaatgggaaaaaatcactttaaatcTCCTCAACATAGGCGGT
ACAAATTTTTTATGGATTAGCACATTTTACCCTTTAAAAGGCAAACAGCT
CATTATTTATCTTCATTTATACCTAGGTTAACTTGATAATGCAATTATTG
GCGCAAAGTGGTTTCATCGTTAAAGACATCTCAAGCCTCTTCACTGAAAC
TTCG Coding sequence (CDS) from alignment at sc0000022_pilon:536155..544758+ >XLOC_044833 ID=XLOC_044833|Name=XLOC_044833|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2850bp|location=Sequence derived from alignment at sc0000022_pilon:536155..544758+ (Clytia hemisphaerica_ch_hm2_pilon) CTAGTATCGACTACCACACTTAACATCTACGAGTCATTTGTTCGCTTCCA ACCAGTTAACATCCACCAGAACGACCAAGGGGACATAAGATTACGTGAAG ATAAATCTTCCATACACGAAATGGACACAACACTCAGTGTCTCTTCTGCT TCGACAAATGATTTTCCCGATAACTTTAGCATGATGACAGATTCATCTGT GTTCTCAAAGAAGCTAGTATCGACTACCACACTTAACATCTACGAGTCAT TTGTTCGCTTCCAACCAGTTAACATCCACCAGAACGACCAAGGGGACATA AGATTACGTGAAGATAAATCTTCCATACACGAAATGGACACAACACTCAG TGTCTCTTCTGCTTCGACAAATGATTTTCCCGATAACTTTAGCATGATGA CAGATTCATCTGTGTTCTCAAAGAAGAGTGTCACAAAGGaagtttcattt tcactttGGATACAATTCACCATTCCTAAAGTGAAATTATCAATGTCTAG CAACTTTGAAATGTCTGGTTGGTGTTATCATTTGATCTCTGACCTGGATG AATTGACTTTCGCTTTCGATTACCAAGACACAACGTTGGAACTGACCAAT AAGATTTCTTCACTTTTAGTATACTATTCTGCTGAAAGAGTGTCACAAAG GaagtttcattttcactttGGATACAATTCACCATTCCTAAAGTGAAATT ATCAATGTCTAGCAACTTTGAAATGTCTGGTTGGTGTTATCATTTGATCT CTGACCTGGATGAATTGACTTTCGCTTTCGATTACCAAGACACAACGTTG GAACTGACCAATAAGATTTCTTCACTTTTAGTATACTATTCTGCTGAAAG CACCGACGAAACAAACCCACCATCATCAAAGAAAGGcatcattttttgtc aaaaagaaaaatcggAGGCTTCACACTCCAAATCATTCCTTTCATTGACT TACCGCCGCTCTAAACACCATTTGACGCCCACGCCCACCTCCACCCACAG CAAGCTCGAGGACACAGACCTTAAATGGACATTCTTCGGTCCAATAGAAG ACTCGATATCAAAACAAGAACTCGAAATCTTCATTCAATCTTTTGATCTT GTCTTGATTGCTAACCCAATCATTTCAACAATGCATATTTTCGTCAGCTC ATTGAAAACCTTCCTGGATCGATACCAGAACATCCGAACACCTACACTTA AAGAACCATCAGATCGACCACACTTCGCCAGCAACTACATCAATGTCTGG CCCATCATCAACATCAAATGTGGAGATATTCGGCTCATTGCCCCTTCCCA GCATATCACCTCGCTTTCCAAAGATGAGCTGGTTCTACTCTTACATTTTC AAGCAATCGGGATTTCATCCCAACCCATTAATCCGATTCGGAAAACGGTT GTCAATAGAAACTATTATAAACGTTTGAAAGAAATGTATCGGGATTcgtt gaaaaagaagaagctgTGGAATGTTCAATATCAGTTGGATATCACCAATG TTGGTCTGTGTACAACTAACTGGAAGTCGGTGCAATTGACAATGTCAGAT GATATTGTACCAACAACCAGTCAAAATCCAGCAGTTGAATGGAACACTCA AGCAAGCACCGACGAAACAAACCCACCATCATCAAAGAAAGGcatcattt tttgtcaaaaagaaaaatcggAGGCTTCACACTCCAAATCATTCCTTTCA TTGACTTACCGCCGCTCTAAACACCATTTGACGCCCACGCCCACCTCCAC CCACAGCAAGCTCGAGGACACAGACCTTAAATGGACATTCTTCGGTCCAA TAGAAGACTCGATATCAAAACAAGAACTCGAAATCTTCATTCAATCTTTT GATCTTGTCTTGATTGCTAACCCAATCATTTCAACAATGCATATTTTCGT CAGCTCATTGAAAACCTTCCTGGATCGATACCAGAACATCCGAACACCTA CACTTAAAGAACCATCAGATCGACCACACTTCGCCAGCAACTACATCAAT GTCTGGCCCATCATCAACATCAAATGTGGAGATATTCGGCTCATTGCCCC TTCCCAGCATATCACCTCGCTTTCCAAAGATGAGCTGGTTCTACTCTTAC ATTTTCAAGCAATCGGGATTTCATCCCAACCCATTAATCCGATTCGGAAA ACGGTTGTCAATAGAAACTATTATAAACGTTTGAAAGAAATGTATCGGGA TTcgttgaaaaagaagaagctgTGGAATGTTCAATATCAGTTGGATATCA CCAATGTTGGTCTGTGTACAACTAACTGGAAGTCGGTGCAATTGACAATG TCAGATGATATTGTACCAACAACCAGTCAAAATCCAGCAGTTGAATGGAA CACTCAAGCAAGTACTCACGCACCACGGTTGACAGCTATCTTTGTTGGTT TCGATTTGAATGCAACATTCGCTCCTTCCATTCTCACTTTCCATGGCAAT AAGTACTCACGCACCACGGTTGACAGCTATCTTTGTTGGTTTCGATTTGA ATGCAACATTCGCTCCTTCCATTCTCACTTTCCATGGCAATAAGatggAG TTCATTACGTCATCAGCTGTCGAGTTTCATTCTCCGAGGCCCATCGAGTT TCATATCAACACATTacagatggAGTTCATTACGTCATCAGCTGTCGAGT TTCATTCTCCGAGGCCCATCGAGTTTCATATCAACACATTacagGTTAAC TTGATAATGCAATTATTGGCGCAAAGTGGTTTCATCGTTAAAGACATCTC AAGCCTCTTCACTGAAACTTCGGTTAACTTGATAATGCAATTATTGGCGC AAAGTGGTTTCATCGTTAAAGACATCTCAAGCCTCTTCACTGAAACTTCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000022_pilon | genome | sc0000022_pilon:536155..544758 + |
Properties
| Property Name | Value |
| Aaloc | 1348-1425:8527 |
| Aaloc | 1273-1347:7919 |
| Aaloc | 1183-1272:2615 |
| Aaloc | 427-1179:1204 |
| Aaloc | 214-423:726 |
| Aaloc | 1-213:1 |
|