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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000022_pilon:949440..956403+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044822 ID=XLOC_044822|Name=XLOC_044822|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6964bp|location=Sequence derived from alignment at sc0000022_pilon:949440..956403+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaaaagaaAAGCTTCAATCAATTACTCAAAGATTTGGAAGGATGCAA
AGATGTGACACCGATTATCAAGGCACAGAAAAGCACGTAAGATCTACAAA
CATCTTTGTTCTAAATGTTTAAGTGGTcgattttctattgttcttgtaTT
TACTAGGAGTTTTAGGATTTTCTCCAACTTTATCAATTTCTACGTGAAAA
CTTGAAGTATAAAGAATACCATATTCCTTGAAGAAAGACACTTGAGGTat
tttctacatttatttttagatttagatttttgtgttttttaggCTTCTAC
GCTATGAGGAAATCAACGAGATGCTTCGACAATTTTTGGAGCTTTCAAAT
AATACACAATCAATGCTACTTGAGAATTACATAGCACAtaccaaaacatt
aattgaGCTGAAGAAAGATTTAGAAATCTCATTTCGAAGGATAAGGTATG
TAATGATTCAATTCAATAGCGCCctcgtactcttaggttccaaataaacg
cccctcccgcttgttaatttttcgaaaattttccaacccacccggacctt
attaggaccccctgtttattaattctgaagaatattttcagctgtcaaag
agaaggccccttattttgctgtagcctgattttagcctatatttatctta
ttttggggtttttagaagtacaatttccatcTCCCCCGCAATTAGGTCCC
tcctgtttattaaaatctcgaaaattttccacctccCCCGCCCCCTTTAA
TTTGAAACCTAAGAGTATGTTGATTACAGGTTCATTTACTTATTGGGGAA
ATTCtcttttgtcatatttaggggAAATGAGTATTTTTCGCGATTGACTT
GGTATTTTTCTCTGATGTTTTGCACAACGATGTAAAAtagtaatgtttaa
aaaatctgaTGGAGCCCaatcttcaaaagaaaatatttttgggctaATTT
GGGCTAAAAACTACCTTAAAATAgcgttttttttggattttttgcaCAAT
CGCCTCATATTATTTCTTCCTGATTTTTTATGcaatgatacaaaatgaaa
atcctcaAAATATGACAGATTTATGAAAGATAAAATGTTTGATACGTAGG
CAAATTTAGGccggaatttttttcaaatttgtttcaTTGGAATTTGTTGA
TCCATCTTTACAGGAAAGGAAGGGTTGTTTATGTTTGTGTCTTGAAACTT
AGTCtggtttgatttccaaaaatatgtGTTTTTTGTATAATGGGGCTCCT
CACCTTACCGAAGGTTGATATCACTTGGGTATTACTTctattaaactttt
tgtttgcTTAATTGAGCTaagtgcatttttttgcaattatACATGAACTa
ggtataaagaaaagaaacataaacataaacatttaaCTCGAAAAATCAAC
TTGCATCCTAAATTTATATTCTCATCACCTTCATGCATGCACTGGTCGAC
ATCTTGTCTCTTGTCTTTATTCCCTCATTCTTACttgttaaaaacaaaca
aattccaatgagacaaatttgaaaaaattctggCCTAAATTTGCCTATCA
AACATTTTATCTTTCATAAATCAACACACGAAATGCCTTCTATTGTGTAC
ATTAAGAAAACAATAATCACattctttatttaatttatagaagtgtattt
ctcaggtctattgacctctatgaaacaatcttacatctttacaatttata
gatcttatctttccattcgtttgtcaattctagtttgaatttccctacgg
acggtgcatttacaacattggttgccaaactgttccaagtatcaatgctc
ctatagtaaagtgaattcgtttggtatcctctaatgccgtcttcagcgaa
attcctctttaattcgagattgtgcttacgttgaggtcgatttcgaagaa
cgagtttctgacatagggaagatttatcatagacattaagatgtttatat
acttccaccatgtccccgattttacgccggatcttgaggctgggtaggtt
catgacttgtaaacgttcttcatatgaatggtttctataaccaccgacaa
gtcttgtggccctacgttggacactttcaattgcatcagagtgtttgatc
agtcgtggagaccaaacagcttgcgcgtactcaaggtgaggtctcacaaa
tgtaatgaaaagtgtgcggagcatctcgggagaaaggaagtcgaagcttc
tattaatcaatccaacgatcgagttacccttcttgatcttggtgtagatg
tgttcttcgaaattcaattcactatcaataatcacTCCAAGATTCTTCTC
TTGATTAACATGTTCTAGGACAGAGCCAGCGATCTCGTAAGGAtgtgcat
gttgaatgttccagaatttccctagtgtcaacacgtggcacttgtcagga
tggaatttcaacaaccagtcaccagaccacttttccattgcctcgatatc
gtgctgaagtctaattgcatcttcagcgttatttatttcttcaacaagct
ttgtgtcatcggcaaagagaaacatttctgagttggtaacttcagctaga
tcattgatgtaaataacgaaaaggagtggacctaagacacttccttgtgg
tacaccactttgcacctggcatttcttagataactgtccattgaccttca
catattggtaacaatcggacaaaaatgctttcatccaaccaagtaccctt
cctctgataccatacgcttcgagttttcttagtaatctgcgatgtggaac
ggtgtcaaatgcctttgcgaagtcgaaatagattacgtcaacaaccttat
cattggatatcgagtctgcacatttgtctaagtagtgaagtagttgtgtc
actgtcgatcgtttacccatgaacccatgttgtttggttgatagcaattt
ctcattcgtgaggtgttccattatttgtttctttaggattctttccatta
ctctacacgcaactgatgttaaactaacgggcctgtaattttctgcaagg
ttcttttttcctttcttgtagatCGGGGACACATTATTGCGATTACAATT
CattggaaaagttttttcaatggCAATGACGATTCGGGAATAAGAGCTTC
AGTTCAATACATTTAGAATTGTACATTAAagagattttttcatttctttc
ataCAGGGCGCTGAAAacgaaattgaatgttgaatatCCAGACGCATTTG
AAGGTAAGTTTCCACCCGCTCTCTATGACTTGTATTCAAGCCAGATTGAC
AGTATAAAAAGTCTGTTCTAAATCGCTATGAAAAATAACATTGGAAGATC
ATCAATATTAAAAATCGCGCGTTTCGTCAGTTGATTGTTCTATTGTTTTA
CATAGTATAGATCATTACTTTAAGACGCGGAAAAAATTACTTTAAGCGGA
AACAAGTTTAGAGGAAAGAAACGAATGTTTCACATTTCTTATGGAAAAAA
GAGATACTTTTCATTGCTCAGCACTCAGCTTCATATATGTATAGATtggc
tttaaaatgttctactGAAATTTTCTTCAGATTAGAGTAGTAAATTTATG
ATATGCTCCACCTATACTGATAAAAGTTTAAATCATGGTTTTTAGTAAGT
AAGTGTCtacccctatatcaggctcgcattatatTGTTCTTAGAAAATAG
AGACATTGCTTGGGTACAAAAAATGAGCCTGTAAATGCTTATaatagacc
agcgtccgagattcagaaaaggccttaaaataGTTTTCGTATGGctcccc
ttagatcagggcaaattattgatattatgctcctaatagggtgtagaatt
gacaaaaagaatttgcccttcaaatctcctgcagttttcgagtgaatcga
tttttagttaatcgatagaacttatcagagttcattttcgatcattttcg
atgtTCCGATCTTAAGATATTTCATTTGGGTAGgcaaatatgctgaaaaa
ctgcaaaaactcagcaaaaaatatcgatgattttcaatatttaaaccaaa
atatctcgagatctagacatcgaaaactgacaaaccataccatttttgga
tactactaatacaaggctatccagctgtgagaaagattttttaataatgc
tgacgtcatcggaaaacgccaaaaacgtcgatttttccccttaaaaatgc
catttctcggcaccaggtggtcgaagttaaacaaataaccccattattct
ttatctacttttcacgctgaatccgttggtagtctcggatatttgatttt
cagacttcgaaaaaaccgttattaATTGGGgaataagttctatcgattaa
ctaaaaatcgattcactcgaaaccTGCAGGATATTCgaagggcaattttt
tttttgtcaattctacaccctattaggggcataatatcaaaaatttgccc
tgatctaagggatgccctacgaagtgacacaattcactacctcggccgct
ggtctgtAAACGTTGTGCTTATAGAAGAAAAACTATTTCTcaacgcaaat
ttttttttagaattatttacCTGCCTTTTGTATAGTTTTCGGATTCTGGT
CAATGAATTGAGaatcaaaaaaatcttaatttcttAAAGGCCCATTTAGA
ATGGCCTATATTccaaaatatgtaaaatatatataggCCTTCAATATATT
TTCGCCTCGAGTACACTTAGAAATAATCTAAACTTGGTTCCCTTTGCAAT
AGGTTTATTATTTTCCCGATATATAGACTTGTAAGTAAATTTGAAAGATT
ATCTACAAGAAAAATATGACGGTTATAGTAATAGTagactttttggaaag
aaatttaACCGATGAACAGAAAAGTAGAAatgtatgaaaattttttcagt
tttaagctgTCGTAAGGATTAATTTCATCATGATTAAGCATATGGTGCCT
AACTTCGAAAATGTCTTAAATATGACCAATTCCTGttgtaattttctttc
tgtataACAGCGCATGAACAGTTTCTATTTTggttctctttctttctttt
ggtcaattttgaaaataaaatatttcttaaagaaTCAtgtaaaaggaaga
aaacaaaatattttgtacaTGGAAAATTGGAAAGCTGTTGTCTattgaga
aaaaacttttcaccGTAACATAACACTAGAAatcactgtaaatttttttt
tgctattttctctGGTGCCTGGTGTTAATGGATCAGCCACTCTAAATTTA
TCTTGAGTTTCAGTTTATGACTAGTTGTTAGAATTGATGAACAACAACAT
GACAAAAATGACATTCGACAACTCAACAACCAGTCAGACAAACTCCACTT
CGACAATCGATGCAGATGACTCTTTGAGGAACTCCGTCTTGTCTGTCAAT
TGGTTGACCTTGGTATACGTTCTATCCTCAAACACCTTGCTTATTTACGG
GCTGATCAAAAGTAAAGGCAATAAGAAACTTAAACTTACAATGTCGAAAC
GATTGTTCATTTATTTGTCGATTGTTGATATGTTAACAGCAGCTTCAACG
GTGGTTCAAACCAATATATATTTGTTCGGTCTTCCTCGTCTTTGGTTTAC
AATCGTTACTGTGTTAACCCATGGCCTACATTTCATGGGTTGTTTGGCCT
TCGTCACGATCACTGTCTTACGATATCTTTCTTTACGTAACCCTTTGAGA
ATAGTGTCTAGTCGATCGATCATTATTGTAATTCTAATCGAGATTGTACT
CGCAACGCTTCACGGAATCGCAAGCTGTTTTTTCGCGATacagtggaaaa
ttttaaaaattgaattcgtCGCAGCAATCTATTGGTTTGTGACATTTTTC
ATAATGATTCTTATATTGTTGATTTCGAACTTTTTGTCATTTGGACATTT
AAAAGAACCAGTAATCAAATTACAGATGCGAAAGCCAAACAGTAAATATA
TGAAACCGAGTGATAGTCTTAACGCAGTTATTGATGCTAACATCGGAGTA
GAACCATTAAGACATTTAACTTTATCtggacaaaatatcaaaaagaagaa
acacgCCATAAAAACCCTCTGTTACATTACGACATCATATATTGTATTCA
ATTTACCTTTGATGGTATTTATGATAGTCAACTTACATTTTCAGAACAAT
TTTGAAACCAAGACAGCTTTTCGATACTGGGTTGGATTGCTGTATTATCT
GGTGTTGATAAATACAGGGAATAATGCTGCCATTTATGTTGTGCGTTCGA
AAGAGTTGCGAATAttctacaaaaagaaaataaagaatttgaAGATCAAA
TCTAAATACTCCATTACAACTCGAACAGAGAAAGGTGCTCCTAATACTCG
AGAAAGCCCATTGTAAATATTAAAGTGTGATATTTCatttacattttata
agaatttgaCGAATTAAAAAGTCTTCCCTTTGTATTAGATTTTCTTAGTC
ATGAGTAATTTATATTAACAGGTTTGAACTAATTAGCattttggtctgta
aattacacactataaacaaataaaagaaggaTTAAAACTTTCACCTAATT
TTTAGTGTGTAGGACAATAGTTACCTGCTCTAAGTATCGTTTTTTCGCAA
AGTTTTATATcaagatttctcaaattttaggtAACTTTTTTAGATCGTTC
ACAGTTATCGAGCACTCTTTTAAACAGTTTTCATTAACAATATATATAAA
CTGTTTACTATCAACTGGGTAGAATCTTTAGGTATATAATCAGAactttg
agtttcaaaaaagtgttttacTTCTTTTACCTCCAACCCAAACATAATAC
GGTTCAACGACTGCTACCCATAATTTTTCTgccatttcatttcaaaatat
ttgctaTTATAGCCACATCGGCAGCAATAAAGGAACTGGAAGAAATCAAC
AGACATTTCCAAGAGGACGACAAAGACGCTACAATAACCAGTACAGTTGA
TGAAGATAATTCCATTGATATTTCAGAAATTGATTCTCAGCATCCTCAAA
ATAAAGAAGATATG Coding sequence (CDS) from alignment at sc0000022_pilon:949440..956403+ >XLOC_044822 ID=XLOC_044822|Name=XLOC_044822|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=876bp|location=Sequence derived from alignment at sc0000022_pilon:949440..956403+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaaaagaaAAGCTTCAATCAATTACTCAAAGATTTGGAAGGATGCAA
AGATGTGACACCGATTATCAAGGCACAGAAAAGCACatggaaaagaaAAG
CTTCAATCAATTACTCAAAGATTTGGAAGGATGCAAAGATGTGACACCGA
TTATCAAGGCACAGAAAAGCACgCTTCTACGCTATGAGGAAATCAACGAG
ATGCTTCGACAATTTTTGGAGCTTTCAAATAATACACAATCAATGCTACT
TGAGAATTACATAGCACAtaccaaaacattaattgaGCTGAAGAAAGATT
TAGAAATCTCATTTCGAAGGATAAGgCTTCTACGCTATGAGGAAATCAAC
GAGATGCTTCGACAATTTTTGGAGCTTTCAAATAATACACAATCAATGCT
ACTTGAGAATTACATAGCACAtaccaaaacattaattgaGCTGAAGAAAG
ATTTAGAAATCTCATTTCGAAGGATAAGGGCGCTGAAAacgaaattgaat
gttgaatatCCAGACGCATTTGAAGGGCGCTGAAAacgaaattgaatgtt
gaatatCCAGACGCATTTGAAGCCACATCGGCAGCAATAAAGGAACTGGA
AGAAATCAACAGACATTTCCAAGAGGACGACAAAGACGCTACAATAACCA
GTACAGTTGATGAAGATAATTCCATTGATATTTCAGAAATTGATTCTCAG
CATCCTCAAAATAAAGAAGATATGCCACATCGGCAGCAATAAAGGAACTG
GAAGAAATCAACAGACATTTCCAAGAGGACGACAAAGACGCTACAATAAC
CAGTACAGTTGATGAAGATAATTCCATTGATATTTCAGAAATTGATTCTC
AGCATCCTCAAAATAAAGAAGATATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000022_pilon | genome | sc0000022_pilon:949440..956403 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 289-438:6815 |
| Aaloc | 241-285:3158 |
| Aaloc | 88-237:294 |
| Aaloc | 1-84:1 |
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