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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1166660..1168410+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044804 ID=XLOC_044804|Name=XLOC_044804|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1751bp|location=Sequence derived from alignment at sc0000023_pilon:1166660..1168410+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTCGAAGCGTTATGACAACGAGTTATCAGAAGCTGTTCGTCAACA
CCCTTGTTTATACGACAGGTCATCGCCTTACTTCAACCATCGTGAATATG
TTGCAAAGTGCTGGGAAGTTGTAGCCACGACATCTCATCTCCCTGATGGT
AACAAGGCttacattattttttaatcaaaactataattaaactctcccta
attcgaataTTCAAATACAAATCAACGATAGTCTACTGAATGGATTAGGA
ATATTTAAATGtgtaagaaaaatagaaaaacgttagacaaatttttgaaa
aactgaccTTTTTGCTCAATAATGAACAGATTTTGAATAAATACGCatta
cataatttattttaaGCCCGCGGAAACGCATTTTAAAACGTATTTTTCAA
ATCGAGGGAGTGCCTCCATaacctatactagacgtcacccgcgtttgttt
tttttacgcaattaacgtctagtCCACTAttcgactttttcgaatgtttt
gggcCCGGTTTTTCGAGCTCTAAATATTCTATTTCGAAGTTTCTGCAGTA
TCTagcgaaaaaaatcaaatttgcgtcaaagcacttgaaaatcgtcaaag
tagaactcaccaagaaacagaatgaaaaatgaaaaatcccggtttttggt
gaggtactcgctagTGCCTTCAGGGATTTGGTAACAGTGAAAGTAAACAT
TTGACACATATAACTCTCATTTTACTTTGTAGCTGAGACGGCACGAAAAG
CATTCGAGAATTTACGCAAAAGGTACAACAAAGTGAAAGGGCAATACCAC
GTCAAACATCCATTAGATGCCAAGGAGCGTTCAGAACTGGCTAAAGAATT
GGCAGGTTATTCTTTCCTTACTTGGTTGGAACCTTTCATACATCGAAGAA
GAAGTCGAAACGTAGACGAGCATTTCAATGCAACGATGGTGGACCGAGAA
TATCCTAGTAATTTCCTTGGTGGTGAAACAGTGGATGGTCATCACCAAAC
ACCATCGATGTACTCTGAACTGACGTCTAATGATGATGATTCTATTGGTG
AAATGGACGAGACAAGTAGAGATGGTACATTCCCAACCTTAGAGACTTAC
AAGGATCACTACCAATCAACTCTGGCAGATGCCGAAGAAACCAAACCTGA
TTTAACATCATCTGATTTACAGTATACCAGAAGTAACCATTCGACATTGA
CATCAGATATGCCGAGTATGTCATCAACACTGATGACAACTGAATCTCGT
TCTGGTGAAAACGAGGTCAGTACCACAAGTTTTCCTGGTAATCCTCCAGT
AATGACATCTAGAAAAGAGGAAACTTCATCATCCAGTACTTTAACATCGG
GTATAAAGCTAATGAAAAGAAAGTTGAATACACACGAGAATGCCAGCATC
CCTTCATCATCTGACAATGGCTATTTACCAAAGATTAATAGCTATACCAG
TGTGGATAGATTACCTTTTACagcaaaactaaagaaaaagaCTGACAATG
ACTTCTCGATTGACCGAAGACGCATGGTAACAGATTCACAAAGTCTGGCA
AGTGAGTCTACAATTTCAAATAGGTTTCAATCAGTTGATAAGATGGATGA
GACGAACCTTTTTCTtcaattattaaaaacaaaacttgacaaactttcag
caaaatcgaaattgaaTTGTCAAAATGAAATGTTACAGtgtgttttgaaa
tatgaattgAAACTGGTTGATTTGGCGACTGAACCACAATCTAATGATTA
G Coding sequence (CDS) from alignment at sc0000023_pilon:1166660..1168410+ >XLOC_044804 ID=XLOC_044804|Name=XLOC_044804|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2334bp|location=Sequence derived from alignment at sc0000023_pilon:1166660..1168410+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTCGAAGCGTTATGACAACGAGTTATCAGAAGCTGTTCGTCAACA
CCCTTGTTTATACGACAGGTCATCGCCTTACTTCAACCATCGTGAATATG
TTGCAAAGTGCTGGGAAGTTGTAGCCACGACATCTCATCTCCCTGATGAT
GAGGTCGAAGCGTTATGACAACGAGTTATCAGAAGCTGTTCGTCAACACC
CTTGTTTATACGACAGGTCATCGCCTTACTTCAACCATCGTGAATATGTT
GCAAAGTGCTGGGAAGTTGTAGCCACGACATCTCATCTCCCTGATGCTGA
GACGGCACGAAAAGCATTCGAGAATTTACGCAAAAGGTACAACAAAGTGA
AAGGGCAATACCACGTCAAACATCCATTAGATGCCAAGGAGCGTTCAGAA
CTGGCTAAAGAATTGGCAGGTTATTCTTTCCTTACTTGGTTGGAACCTTT
CATACATCGAAGAAGAAGTCGAAACGTAGACGAGCATTTCAATGCAACGA
TGGTGGACCGAGAATATCCTAGTAATTTCCTTGGTGGTGAAACAGTGGAT
GGTCATCACCAAACACCATCGATGTACTCTGAACTGACGTCTAATGATGA
TGATTCTATTGGTGAAATGGACGAGACAAGTAGAGATGGTACATTCCCAA
CCTTAGAGACTTACAAGGATCACTACCAATCAACTCTGGCAGATGCCGAA
GAAACCAAACCTGATTTAACATCATCTGATTTACAGTATACCAGAAGTAA
CCATTCGACATTGACATCAGATATGCCGAGTATGTCATCAACACTGATGA
CAACTGAATCTCGTTCTGGTGAAAACGAGGTCAGTACCACAAGTTTTCCT
GGTAATCCTCCAGTAATGACATCTAGAAAAGAGGAAACTTCATCATCCAG
TACTTTAACATCGGGTATAAAGCTAATGAAAAGAAAGTTGAATACACACG
AGAATGCCAGCATCCCTTCATCATCTGACAATGGCTATTTACCAAAGATT
AATAGCTATACCAGTGTGGATAGATTACCTTTTACagcaaaactaaagaa
aaagaCTGACAATGACTTCTCGATTGACCGAAGACGCATGGTAACAGATT
CACAAAGTCTGGCAAGTGAGTCTACAATTTCAAATAGGTTTCAATCAGTT
GATAAGATGGATGAGACGAACCTTTTTCTtcaattattaaaaacaaaact
tgacaaactttcagcaaaatcgaaattgaaTTGTCAAAATGAAATGTTAC
AGtgtgttttgaaatatgaattgAAACTGGTTGATTTGGCGACTGAACCA
CAATCTAATGATTAGCTGAGACGGCACGAAAAGCATTCGAGAATTTACGC
AAAAGGTACAACAAAGTGAAAGGGCAATACCACGTCAAACATCCATTAGA
TGCCAAGGAGCGTTCAGAACTGGCTAAAGAATTGGCAGGTTATTCTTTCC
TTACTTGGTTGGAACCTTTCATACATCGAAGAAGAAGTCGAAACGTAGAC
GAGCATTTCAATGCAACGATGGTGGACCGAGAATATCCTAGTAATTTCCT
TGGTGGTGAAACAGTGGATGGTCATCACCAAACACCATCGATGTACTCTG
AACTGACGTCTAATGATGATGATTCTATTGGTGAAATGGACGAGACAAGT
AGAGATGGTACATTCCCAACCTTAGAGACTTACAAGGATCACTACCAATC
AACTCTGGCAGATGCCGAAGAAACCAAACCTGATTTAACATCATCTGATT
TACAGTATACCAGAAGTAACCATTCGACATTGACATCAGATATGCCGAGT
ATGTCATCAACACTGATGACAACTGAATCTCGTTCTGGTGAAAACGAGGT
CAGTACCACAAGTTTTCCTGGTAATCCTCCAGTAATGACATCTAGAAAAG
AGGAAACTTCATCATCCAGTACTTTAACATCGGGTATAAAGCTAATGAAA
AGAAAGTTGAATACACACGAGAATGCCAGCATCCCTTCATCATCTGACAA
TGGCTATTTACCAAAGATTAATAGCTATACCAGTGTGGATAGATTACCTT
TTACagcaaaactaaagaaaaagaCTGACAATGACTTCTCGATTGACCGA
AGACGCATGGTAACAGATTCACAAAGTCTGGCAAGTGAGTCTACAATTTC
AAATAGGTTTCAATCAGTTGATAAGATGGATGAGACGAACCTTTTTCTtc
aattattaaaaacaaaacttgacaaactttcagcaaaatcgaaattgaaT
TGTCAAAATGAAATGTTACAGtgtgttttgaaatatgaattgAAACTGGT
TGATTTGGCGACTGAACCACAATCTAATGATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1166660..1168410 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 151-1167:735 |
| Aaloc | 1-147:1 |
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