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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000022_pilon:459779..464422- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044802 ID=XLOC_044802|Name=XLOC_044802|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4644bp|location=Sequence derived from alignment at sc0000022_pilon:459779..464422- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACTGAAATTACTACTGGATATGAAAGAAATGAGAAAATTGAAAGG
ATTACAAAATAAAAATGAAAATCTTCGCCAAACATCGCTTTATGAGAGTT
TCGGACACCTTCCAGAGCTCGTGTTGTTCTTTGCGAGTTTAGGGAGTCAT
ATAAGTGGCTCAGCATGCCACTACTACAAGTACTTTTATTTCTCGGAAAG
AAGAAATTTTCAATTCGATTTTCGGAATCATAAACAGACGTGTGCCAAAC
ATTTGAATACCACCCAAAGCAAACAACAGACAATGGTAAGTTGTCATTAT
TGTCTTTTCTGACTTGAGATTTTTTAAACCGGTCAGAGAGGGGAGACGAC
CATAGATATATAAAGCCCGAAGGGCTAGATATAAAGCTTTTGCTGAAAAG
TGTGCCGTGGTTAGGTAGAAATCCTACCTAAGTCACGTGACATTACAATA
GAATTTCAGCGATGACCAATTAGAAGCTTTGCGGGTTTTCGAAAAAAATA
ACAACACTATTCTTTCCGATATTCACTTTTTTTTTGCCTGCGATGGCTTA
AAGCCCGACATCTAGCCCTTCGGGCTTTATAAATCTATGGAGACGACGTG
ATAAGTTTGCTATTTATAAATCATATTTCATCGCAGAGGTTTCCGTACGG
GAATCTTTTATCACATAGACAATGCACATAGTATGTACTACGAAACGATA
AACGTAAAATACACTCTGGTACAGAGTAGGTATGCACATACCGGACCTCC
GAACTGGTTCCATTTTTTAATTTTACTGATAGACGTGATCTTTTGCGAGC
TCTATCAGAATCATAAAAAGTGAATTAAGGGCTGTGTTTGTGTTTGGCTC
AAAGAATTCAAGTAGGCAAGGCCAGAAACTTCTTTGGTTATCCTGACAAA
AACTTGAACCTGTATTCATCTATACCATTGCGCCTATACTTATTGAACAG
TACATAATTCCTTTTTTACCACCTTCGACCCCAGGCCTTACCTGACCCCC
TTACGCTATTGATAATTCTGATGGACGCGTTGAGTAAACGATCCCTCCGA
TTTTACAGCACTGGCCTCGTTATGTCGCAGATTCGTTTAACGGCCATGGC
TCACGAGGGTGATCTATATACTGAAATGCAACTAATATTCCCAAATAATC
ATTAATATTTTAAGACTTTGTTTCATTATCTCAGGTTCAAAGTGACATGT
CAAGTTTTCAAATCATCGACATCTACTTCGGAATGGTTCCAACAATCCTG
GCGTGTTTGTTTCTCGGACCAATATCCGATCGAGTAGGACGCAAACCCAT
CATAAAAATCGGATTAATCGGAATGATTTTGACTCAAATTATGCATCTAG
CAGTCATTCATATGGATTGGCCGATATGGGTGTTTTATTTGGTGACGCTA
ATGCGTTCTATAAGTGGAGGAGAGTTGGGAATTCGAATCGCAGCTATGGC
TTATGTTGTTGATATTTGCAAGGAAACGAAATCGCTGGCTTGGAAACTAG
GTAAATTTGTGTTGGTTGGGTTAAGTATGCTTTAAGAATCAGTAGAAAAT
TATTTTGTTTTGTTCTACAGCACCAATAAAAATCACCAACGAAAAAACCT
CGAGTGCTCTCAAGGTTAATAGACACTTTATCGCTTATTATCGAATAATA
TAATAAGAATCCGTCCAGTGAGTAGTTTAATTAACGCTAAATTGCCGACA
TTGTGGTTATGAGAATTCTGCGATTCTGACTAACTAAAGATACATTCTTC
TGTTTTTTAGCAACACTACAGTGCGTTGAACTATTAGGTGCTATGATCAG
TTCGTACACTAGTGGACCCCTCATTCAAAATACTGGGTTCCAATTCCCAA
TAATGCTTAGTCTAGCTTTACAAATCACTCCTATGGTATACACTGTGTGC
TTCTTGAAGGAATCCTACAAAATGTGTGAGAAAGATCGGCTACCGGCAAA
AGAGATTCTCAAACAACCGCTACATTTGATTACAGTATTCACCAAACAGC
GAAAGACTCGAAAAGAACTATACTTGTTGTTTGCTGTTTTTATTATGTTA
TCTGAAACGACTCACGCCTTTGATAGTGGTGGTGCTTTATTTTTGCTTGG
TCAGCCATTTTGTATGCCACCAAATTTATTGAGTTACTTGCATGGCATGA
AAATAACTTTATCTGTTACTGGACTTTTGTTTAGTACCAAACTATTGGCC
AAATACCTTTCCAGTTTGACACTTTGTTTAGTTTCAATTTTTGTCACAAT
TATTGATCGATCTTCAATGGTGGTCATTGAAACTACATTGATGGTTTTTC
TTTGTAAGTATAAATTTACTAGCTTTGTCTCCCCCCTTTTGGATATTTGC
ACCAAGACCGAATTTTAAATTTCTGAAAAATGAAATTCATTTGTAAAAGT
ATACCTTAGATAGAATCTACTCTCATAAAAAAACTTGATAAAATCTTAAA
ATCGCGTTCCAAAGAGCAACTTACAGTACCTTTTACCGAATACTATCAGA
AGACTGATCTCTGTGAGGGAATGGCTGTGAATTTGAAAATCACCATACCA
ATCTTGTCAATCTCTTTATAGGTATTTTGAGCCTATATTTGATATATTTT
GCATATTTTTCTTATAGTTGGAGGATTGAGATTTTTCGAAGGATGGTATT
CACCGATTCTTCGTTCCTTCATTTCGTCATCTGTAAACGAAGCGGAGCAA
GGTGAGTAAGTTGATTCGGGTTGCTCAGAATGTTATCCCGAGTTATTCAA
ATAACTTTCATCCCTGGTTGTTATAAGGGAAGTTTATTTGAGCTACTCCT
GAAGCACTAGGTTTCAGTCGCGTCAAAGTTGATAAAACGTGTCAAAAATA
AAAGAACATTCTTCCTAAAGTACTATACCTTACATTACTGCATTGTAGTC
TTGAGCTTTAAGTGTTTAAACATGACCTTCTTTACATTATCCTATCTATG
ACTTGCAAGTAGTTGTTAGATGGGATGTTAGTGGAGCTAAAACTAAAACG
CTGGGCTATATGGCTATATTGTAGTCGTGGTCAAAGTGGTTTACACTATC
CTATCTATAACTTTAGGTTCCATCCTTTGTTTACTTTCAATCATGGTAAC
TATTCTGACGTCCATCACAAAAACAATATTTTTGACATTATACACCAAAC
TTTTGCAACATGGAAAAGTTCGTTGGTTTTTTGTGCTGACGTCACCATTA
ATCATAATGGCCACACCCTTATTGATGTAAGTAGCCTATATGTCGCTTAA
ATTAAAAATCTTTTTCATGCGTATTCTTTACATTGAAACATCCTTGTCTC
AATATATTTTATTGCTGAAGAAAGATCACTAAAATCACCGTGTCACAGAC
CCGATCACTAGAGAAATTGGCAAAAATGACCTGAAGTTTTTAACCTTACT
GTAAAATACGTTTTGTTAAATGATAATTTTGCACTTCAAAACTATCCCCA
TTTACATTAGCGTTTTTTGAGCTAGAAGCAATAGAAGAATAAGTTTTCAT
TCACACTGAGCGAAAAAGTTCCAACGGGGCACTGAGAAAGGGGTGTACTA
GACTAGTAAACCACGTCTTTGTATTTCGCTTACACTTGCAATGGGCTCAC
TACGCTCGCTGAATACAAGCAATAGTCTTCCCAAACCACTCCCCCACGGC
AATTTCTATTTCATAAGAAATCTTTATAAGCACTATTCCCCGCGCGTTCC
TGTGTCTAAAGAAAGACAGACGTTTGCTAGTCTAGGGGTGTACTAAAGGA
AGGAAATTAATTGCATAGTTTAAATCTTTGAAATTTAACTTGCCTGTTAC
AATAACAAAGCAGCAATGTTGGTATTAAGATCATTTCATGTTTTGTGGTC
TATTTCGTTCTTTCATTTATAGGGCTTTGATGAAATAAAATTGCTTTAAA
TGCGTGACAGGATGACAGCTTGCTTACATAGATCTCTCATTTGATTTTCC
TTTCAGTTTAAGATTGTACATTTTGATAACATTGAAAGTTTTCTTAAGAG
CTTACTGATCCATTAAGTAATGAAAAAGGATTTCGATGAGATTTGTAGAA
AATTTGAGTGGGCTAGAAAATCGCTATCCGAAATCGTGGTTTTTATAAAT
AAAACATAAATATAATATAACACGCGTTTCGTATACACCTTTTCGACCGT
AGTCGTGCGGTCAGGCGCGTGCCACTTAATTATTTAATCATCCCCTTAAA
CTCGATCCGATCCTTATTTTTTTTTTGACACATTTTTCTATTGTCTAGGA
CTCTATAGGACTGGGACGGTCTTAGTGGGATAAAGCGGACAAAAAAATGC
CCGCGCGGCAATTGGCGGCTATGGTCGAAAAGGTTATTGCCTTATCATGT
ATATGTTTTGGCTGTCAGTTATAGTGACCCATACAATTTGCCAAAATGGA
AAAATGAGCTAAAATTGCTTGTCGCACGGCCACTTTCTGTTTTGTTTATT
TTCTTTCGTGCAAATTACATGGGATCAAAGCAAATGCTATGCAAAAATCT
TATTCGAAATCCGTGTATTGTTTTTAACAACTTGCCGTTTTCGATATATT
TTCATACTATTTATTTTTCAGATATTTCTGGCTGGTGAAGAAGAAAAGAG
AAAAATCAGAAAAAGAATTTGGCAATAAGGAAATTAAAGATTGA Coding sequence (CDS) from alignment at sc0000022_pilon:459779..464422- >XLOC_044802 ID=XLOC_044802|Name=XLOC_044802|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2922bp|location=Sequence derived from alignment at sc0000022_pilon:459779..464422- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACTGAAATTACTACTGGATATGAAAGAAATGAGAAAATTGAAAGG
ATTACAAAATAAAAATGAAAATCTTCGCCAAACATCGCTTTATGAGAGTT
TCGGACACCTTCCAGAGCTCGTGTTGTTCTTTGCGAGTTTAGGGAGTCAT
ATAAGTGGCTCAGCATGCCACTACTACAAGTACTTTTATTTCTCGGAAAG
AAGAAATTTTCAATTCGATTTTCGGAATCATAAACAGACGTGTGCCAAAC
ATTTGAATACCACCCAAAGCAAACAACAGACAATGATGAAACTGAAATTA
CTACTGGATATGAAAGAAATGAGAAAATTGAAAGGATTACAAAATAAAAA
TGAAAATCTTCGCCAAACATCGCTTTATGAGAGTTTCGGACACCTTCCAG
AGCTCGTGTTGTTCTTTGCGAGTTTAGGGAGTCATATAAGTGGCTCAGCA
TGCCACTACTACAAGTACTTTTATTTCTCGGAAAGAAGAAATTTTCAATT
CGATTTTCGGAATCATAAACAGACGTGTGCCAAACATTTGAATACCACCC
AAAGCAAACAACAGACAATGGTTCAAAGTGACATGTCAAGTTTTCAAATC
ATCGACATCTACTTCGGAATGGTTCCAACAATCCTGGCGTGTTTGTTTCT
CGGACCAATATCCGATCGAGTAGGACGCAAACCCATCATAAAAATCGGAT
TAATCGGAATGATTTTGACTCAAATTATGCATCTAGCAGTCATTCATATG
GATTGGCCGATATGGGTGTTTTATTTGGTGACGCTAATGCGTTCTATAAG
TGGAGGAGAGTTGGGAATTCGAATCGCAGCTATGGCTTATGTTGTTGATA
TTTGCAAGGAAACGAAATCGCTGGCTTGGAAACTAGGTTCAAAGTGACAT
GTCAAGTTTTCAAATCATCGACATCTACTTCGGAATGGTTCCAACAATCC
TGGCGTGTTTGTTTCTCGGACCAATATCCGATCGAGTAGGACGCAAACCC
ATCATAAAAATCGGATTAATCGGAATGATTTTGACTCAAATTATGCATCT
AGCAGTCATTCATATGGATTGGCCGATATGGGTGTTTTATTTGGTGACGC
TAATGCGTTCTATAAGTGGAGGAGAGTTGGGAATTCGAATCGCAGCTATG
GCTTATGTTGTTGATATTTGCAAGGAAACGAAATCGCTGGCTTGGAAACT
AGCAACACTACAGTGCGTTGAACTATTAGGTGCTATGATCAGTTCGTACA
CTAGTGGACCCCTCATTCAAAATACTGGGTTCCAATTCCCAATAATGCTT
AGTCTAGCTTTACAAATCACTCCTATGGTATACACTGTGTGCTTCTTGAA
GGAATCCTACAAAATGTGTGAGAAAGATCGGCTACCGGCAAAAGAGATTC
TCAAACAACCGCTACATTTGATTACAGTATTCACCAAACAGCGAAAGACT
CGAAAAGAACTATACTTGTTGTTTGCTGTTTTTATTATGTTATCTGAAAC
GACTCACGCCTTTGATAGTGGTGGTGCTTTATTTTTGCTTGGTCAGCCAT
TTTGTATGCCACCAAATTTATTGAGTTACTTGCATGGCATGAAAATAACT
TTATCTGTTACTGGACTTTTGTTTAGTACCAAACTATTGGCCAAATACCT
TTCCAGTTTGACACTTTGTTTAGTTTCAATTTTTGTCACAATTATTGATC
GATCTTCAATGGTGGTCATTGAAACTACATTGATGGTTTTTCTTTCAACA
CTACAGTGCGTTGAACTATTAGGTGCTATGATCAGTTCGTACACTAGTGG
ACCCCTCATTCAAAATACTGGGTTCCAATTCCCAATAATGCTTAGTCTAG
CTTTACAAATCACTCCTATGGTATACACTGTGTGCTTCTTGAAGGAATCC
TACAAAATGTGTGAGAAAGATCGGCTACCGGCAAAAGAGATTCTCAAACA
ACCGCTACATTTGATTACAGTATTCACCAAACAGCGAAAGACTCGAAAAG
AACTATACTTGTTGTTTGCTGTTTTTATTATGTTATCTGAAACGACTCAC
GCCTTTGATAGTGGTGGTGCTTTATTTTTGCTTGGTCAGCCATTTTGTAT
GCCACCAAATTTATTGAGTTACTTGCATGGCATGAAAATAACTTTATCTG
TTACTGGACTTTTGTTTAGTACCAAACTATTGGCCAAATACCTTTCCAGT
TTGACACTTTGTTTAGTTTCAATTTTTGTCACAATTATTGATCGATCTTC
AATGGTGGTCATTGAAACTACATTGATGGTTTTTCTTTTTGGAGGATTGA
GATTTTTCGAAGGATGGTATTCACCGATTCTTCGTTCCTTCATTTCGTCA
TCTGTAAACGAAGCGGAGCAAGTTGGAGGATTGAGATTTTTCGAAGGATG
GTATTCACCGATTCTTCGTTCCTTCATTTCGTCATCTGTAAACGAAGCGG
AGCAAGGTTCCATCCTTTGTTTACTTTCAATCATGGTAACTATTCTGACG
TCCATCACAAAAACAATATTTTTGACATTATACACCAAACTTTTGCAACA
TGGAAAAGTTCGTTGGTTTTTTGTGCTGACGTCACCATTAATCATAATGG
CCACACCCTTATTGATGTTCCATCCTTTGTTTACTTTCAATCATGGTAAC
TATTCTGACGTCCATCACAAAAACAATATTTTTGACATTATACACCAAAC
TTTTGCAACATGGAAAAGTTCGTTGGTTTTTTGTGCTGACGTCACCATTA
ATCATAATGGCCACACCCTTATTGATATATTTCTGGCTGGTGAAGAAGAA
AAGAGAAAAATCAGAAAAAGAATTTGGCAATAAGGAAATTAAAGATTGAA
TATTTCTGGCTGGTGAAGAAGAAAAGAGAAAAATCAGAAAAAGAATTTGG
CAATAAGGAAATTAAAGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000022_pilon | genome | sc0000022_pilon:459779..464422 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1390-1461:73 |
| Aaloc | 1231-1386:1577 |
| Aaloc | 1147-1227:2026 |
| Aaloc | 604-1143:2883 |
| Aaloc | 286-600:3461 |
| Aaloc | 1-285:4645 |
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