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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000022_pilon:721787..727341- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044798 ID=XLOC_044798|Name=XLOC_044798|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5555bp|location=Sequence derived from alignment at sc0000022_pilon:721787..727341- (Clytia hemisphaerica_ch_hm2_pilon)
ACAAATCAAGAAGAATCAATAGCTAAAGTTTGCTCAAAACATAATATAAT
AAAAATGAAGTCACTCATTTTCTTAGCAGGGATTGTTGCAGGTATGTTTC
GCCTACATTTCGGATAAATATTTTAAGCAAGTTTGAATTTTTTCTAGTCA
TAGTGCTGCCAACTAACTTTCTTTTTATAGCTTTCTACTCAACCCATATT
GAGGGTTTAGACATATGAAGTTTACTCTTCCTTAACTTTCACCATTTTAT
GTCGTGAAAAAGTCTGATCCACCTCTTATAAAAATAGAAATTGAACAAAA
CTAACATACCCTGGTCCTCAAAGTTGTTGAAATGACTAAAACTGTCAATG
TGTGTAAAAAAATTGTTTTTTTTTTCAATTTTAGTATGCAGTGGATTATC
AGCACCTGATGTCACTGGGACCACACCACCAGCTGTCCCATGTCCAAACA
CTTTATGTAAAGGAAAAGCTGATGGAAACTTTGCTTATGTCAACCCAACC
AACTACAAACTCGTGAAGAACTACTTCGTCCAATGTCTCGGAGGAAATGC
TTATTGTCAAGCTTGTTGGCCATTTAGTTTGGAATTCAGTCCACGATGCA
ACCAATGTTTGTATGGTTCAAATGATGAATGTGTCACCACTCTTCCATTC
CAACCAGCCACCACTTTCCAATGCCCAGACAAATGTCCCCACCGTGGACC
AAAATTCACCGGAAATATTGCTGACCCAGCTGAAAAACGACAATACGTTG
CATGCTGGGAAGGAGTCACTGTTGGATGTGTTGCTTGTCCAGGAAGATTA
GAATTCAACGAAAGCGAAAATGCTTGCTTGTTCGAAGGAAAATACATCAC
TGAACCAACAAAGAACTAAGCGTCATATTTTTAAATAATTTAGTAGATAA
ATATTTTTATGAAAACCGAAATTATTTCTTCATTCGTACGGCTTTTTAGT
ATTCTCTAAGCCGTACCAAAGTTTTTCAATTCTCTAATTGATCTTTCTAT
GATTTTATATTCAATCTTCAATTTCTCATTTTCAGTTTTCTTTTTCCATA
CTTTGTCTCGCGATATTTGACATTCGATGTGCTATTAAATTTGTCACTTT
CTACAGCTGTTCCACTTCACCAAACTACAACATTAATCTAGTTGATGGAG
GATCGCATTAATGAATAGCTTTTTACTGTCTATAATTCTTTGTAAAACCG
AAAAATACACGTTTTTTTATTTCTTCATGCTTCGCTAACACACTTTGTGC
TTTATTTTGGCTCTTTATTCTGATATTTCCAGTTATTTGTCTTCTCAATT
CTCTCAGTATTGCATCTTTTTTTCTCAATTCATGTCATTTTGTAGCCACA
TTCAAACTGAAAATATCCATTTTGGACATTCCCAAGGCATTTCTTTTAAG
ACATTCTACTCTATCAACGGGCCTTATATTGCATATTCGGAACTTTTTCT
TAACGTTTTGATAAAATTTTTCTAGTATTTATTAGTCTCAAATTTATCAA
TACCATTTTTTCTCTTAAAACCTTGAAATATACGAAAATTATATTCTATC
AAACCTTAATTTAATTCTTGTACAAAATCTCATTTTTGAAAATGTAACGA
AAGAAAACTATTAAAGTTTGAAATGCGCCCGGTTTCAAAACTTATCACAC
CAACGTATCAGCGAGACTCGATTTATCTGATATTCCGATGACGTACTGGC
GGCCCTCCACGCTAAAGCTCTAAAAGAGCGGACCAATATACCACCGGAGA
GGAATGATGTGCCGCATCCCCAATCGAGTTAAACAGCTCTTGCGCGTAAA
CCCATAAATATTTCAGTTGGACTCGCCAATCCCCGAAAACAAGAGCTTGG
CTACCAGACCTCCCGCTGTAAAATTCTTGACGCGGTCTCGCAAAATTCCG
TAATGTAAACCTTCCAGATGTTGTAAATTTTCCCGGCCTTCAGAGCTTTA
GCGTGTCGGATGAAAATTTCACCATCTGGGTGCCAGATAACGGTTAGATC
CAACCCGGTGGATGACTCGCGGTCATTAATTGCCAAAAATGGCCTGAAAC
TCATATTCACGGTGATGTTTAAACCTGTTAAAACCGATTAAGATCTATTC
ATGCTATTCATGGTGTAATCTTTTCGTCAATTGACAATCTGAATCAAAAC
AATTGGCCACCATTATTGGTGGCAAAACATTTGTGCTCCCCAATGCTTTC
CAATCAAGGACCCCGGAAAAATAAAAGAAAAGCTTAATGCAGAAGTCCAA
ACGCTTAAAAACGAAGAAAAAACTCTTCATTGAAATTCTTTAATTATCTA
CAATAGATTTCTAAAAGATATTTAATTCTATTATATTGCGTTACAAGTTA
TTAATCTTTCTTTTTCGTAAGCCCCCGCTTTAAGACCAACTAACTGTCAG
CTATACTGTGATTTGACGTCAAATCTTGTCTTGATGGTACTGACGTCGGT
ATGTTTTTGAGCTTCCAAGAGGCTGTATTTCTTTTTGTGTTTGAGTCAGA
GAGTTGCTGTAATACACGTTTTTGCTCCGAATTTCATGCTCTTTCAGATG
GTACCAATCATTTTCGTTTATTTCGAATTTTGAAAATCAGCAATTTTCCT
ACCCCTCTTTTTTCCTTGCAGTTTTGCCAATGGCGTCACTATTTTGGTCA
TAAAAAGTTTTCCTGGGCCTAATCCGCGTCCTCCCTCTCAAAAATATCTT
ATAAAATAATACACTGTTCTTTGAAATGGAATAAAAATAGCTAGGTCATA
AAAAAGATGTCACGGGACCCCAGGCTTGCCCCCCTACTAATATCCATCTT
ATCGAGAAAATCAGTGTCACCTGTTTTACACCCCTATATTAGTGACCCTC
AAATCCGCTTTGATGAATAACCCGATGTAAATAATTTCTGAAGTGGGCTT
GATTTTTCCTTAAATTCAATAGAAATTTTACACCCCAGGCCGAATTCGGA
AATCCATCGTTAAACCCCAGTCATTAGTTACATCATGTACCACTCGGTAA
AAATTTCCAGATTTTTTGCAAAAAGCAGCCCAGTAAAGTAAAAGTATCTC
TTATAATTTTTTAACTGCTTATTCCCATCATAATCTATTCCAAGATTATC
AAAAATCCCGATCACCTTGCCACGGGATAAATCGAGCTGAATATTATCTA
TTATCACCCAGAGAGATCTTGAGATCTCAAAAAAATTAAATTCCACAGTT
AGCGTTGTCTGTCAGCCAAAAAAGTTAGCTTTTTTTTGTCCATTTTGGCT
GTACTCGTTTGCCATAACATAGAATCTTCGCTATTTCTTTCTCAGGGAAC
GATATTTTCGGATATACTAGGCTTCTATAAGAAAGTCAGGTCTATACATT
TCTGTGGATTTTTCCCACGGTGTTGGAGTAGCCATTTGATAAAATGATAG
TCGAACAAAGGAATTCTTCTTATCTTTTGACAAACAATCATTACCAGGAT
ACTTCTTCACTTCGAGTCCTTGTATACGTATTTCTTTATGTAAAGATAAT
ATAATATTTTGGACAGCTATGTAACATCGTTTAAATGGCATTCACGGTCA
AGATGTACGTCAATAAGTGGCATTTAAGGCAGCGAATTGTACATAAATTG
GTTTTGCTACATAGAAAAACGGGGGAAAAGCTTCTTTCTCGATTAATTAA
ACGAGCCCCCCCCCCCCCCCCCCCCCAGTGGTAACTCTAATCACGATATC
ACGCAATTTTTGCCTTCAATTACGATCAAGCAAATAAGCAAAAAAAAAAT
GGACAATCACGCATCCATTTGAAAAAGTCCAAATCACGTATCATGGCTCC
AAAATCTTTCAAATCACGATCACCTTTTGACCTCTCATCACGCGATCACG
CTTCAAAAAAGTCCCTATAAAGTCATCACGAAAACTGTTTTTGGGGCCTC
ATTAAACATTCTGATGTTATTGTTCTTATGGTCAATTTTCTATAGTTTCA
GATTTTCAAAGATTTGTGAAACAAGGACTCGCAATGAGGAAGTACCCTGC
CCAGCTGGCACACAACGTTGTTTCAACATTCATCTAACGTTATATGGACG
TTGTGAACGTTAAATAAACGTTGAAACAACGTTGTGTGCCAGCTGGGTGG
CCTGGATTGTTTGTCAAAAGATAAGAAGAATTCCTTTGTTTAGGGTGTCA
TCGTGTTATGCAACTGATTGAAATATTTTCCGGTATTCATTTTCGCGAAA
AAGGAAATGATACAAAGGGAAAATGAAGAATTAATTTGTATTTGATTACA
TTAGAAAACCCAATTAAAATGACAGCCCGGTATCAATATTTTGAAGTGTT
TCAAAATAACAAGGAAGTAAGGTACGTATAAATAGACCTAGACTTTTTCA
AAATAATCATTCAACAACTTGAAACAAACTAATCAAGAAGAATCAATACC
AAAGTTTGCTCAAAACATAATATAATAAAAATGAAGTCACTCATTTTCTT
AGCAGGGATTGTTGCAGGTATGTTTCCCCTAGATTTCGGATTAATATTTT
AAGCAAGTTTGAATTTTTTTCTAGTCACCCAGCTGGCATACAATGTTGTT
TCAACGTTCATTTAACGTTATATGACGTTGTGAACGTTAGATAAACGTTG
AAACAACGTTGTGTGCCAGCTGGGCAGTGCTGCAAACTAATTTTCTTTTT
ATAGATTTCTACTCAACCCATATTGAGGGTGTAGACATATGAACCATAAA
ACAAAAGAAAGTCCGAAAAGATTCATTCTGACATCAAAAATCTTGAAGTA
ACAGACGAAGTGATCTCATGTAAAAATGCATTTTTACATGAGATCACTTC
GTCTGCTACTTCAAGATTTTTGATGTCAGAATGAATCTTTTCGGACTTTC
TTTTGTTTTATGGTTTTTAAAATTATCGGCTGGTTATGGATTGTAGACAT
ATGAAGTTTACTCTTCCTTAACTTTCACCATTTTATGTTTGTGAAAAAAT
CTGATCCACCTCTTATAAAAAGAGAAATTGAACAAAACTAACATACCCTG
GTCCTCAAAGTTGTTGAAATGACTAAAACTGTCAATGTGTGTAACAAAAA
TTGTTTTTTTTCAATTTTAGTATGCAGTGGATTATCAGCACCTGATGTCA
CTGGAACCACACCACCAGCTGTCCCATGTCCAAACACTTTATGTAAAGGA
AAAGCTGATGGAAACTTTGCTTATGTCAACCCAACCAACTATAAACTCGT
CAAGAACTATTTCGTCCAATGTCTCGGAGGAAATGCTTATTGTCAAGCAT
GCTGGCCACTCAGTTTGGAATTCAGCCCACGATGCAACCAATGTTTGTAC
GGTTCAAATGATGAATGTGTCACCACTCTTCCATTCCAACCAGCCACCAC
TTTCCAATGCCCAGACAAATGTCCCCACCGTGGACCTAAATTCACCGGAA
ACATTGCTGACCCAGCTGAAAAACGACAATACGTTGCATGCTGGGAAGGA
GTCACTGTTGGATGTGTTGCTTGTCCAGGAAATTTGGAATTCAACGAAAG
CGAAAATGCTTGCTTGTTTGAAGGAAAATACATCACTGAACCAACAAAGA
ACTAA Coding sequence (CDS) from alignment at sc0000022_pilon:721787..727341- >XLOC_044798 ID=XLOC_044798|Name=XLOC_044798|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1152bp|location=Sequence derived from alignment at sc0000022_pilon:721787..727341- (Clytia hemisphaerica_ch_hm2_pilon)
ACAAATCAAGAAGAATCAATAGCTAAAGTTTGCTCAAAACATAATATAAT
AAAAATGAAGTCACTCATTTTCTTAGCAGGGATTGTTGCAGACAAATCAA
GAAGAATCAATAGCTAAAGTTTGCTCAAAACATAATATAATAAAAATGAA
GTCACTCATTTTCTTAGCAGGGATTGTTGCAGTATGCAGTGGATTATCAG
CACCTGATGTCACTGGAACCACACCACCAGCTGTCCCATGTCCAAACACT
TTATGTAAAGGAAAAGCTGATGGAAACTTTGCTTATGTCAACCCAACCAA
CTATAAACTCGTCAAGAACTATTTCGTCCAATGTCTCGGAGGAAATGCTT
ATTGTCAAGCATGCTGGCCACTCAGTTTGGAATTCAGCCCACGATGCAAC
CAATGTTTGTACGGTTCAAATGATGAATGTGTCACCACTCTTCCATTCCA
ACCAGCCACCACTTTCCAATGCCCAGACAAATGTCCCCACCGTGGACCTA
AATTCACCGGAAACATTGCTGACCCAGCTGAAAAACGACAATACGTTGCA
TGCTGGGAAGGAGTCACTGTTGGATGTGTTGCTTGTCCAGGAAATTTGGA
ATTCAACGAAAGCGAAAATGCTTGCTTGTTTGAAGGAAAATACATCACTG
AACCAACAAAGAACTAATATGCAGTGGATTATCAGCACCTGATGTCACTG
GAACCACACCACCAGCTGTCCCATGTCCAAACACTTTATGTAAAGGAAAA
GCTGATGGAAACTTTGCTTATGTCAACCCAACCAACTATAAACTCGTCAA
GAACTATTTCGTCCAATGTCTCGGAGGAAATGCTTATTGTCAAGCATGCT
GGCCACTCAGTTTGGAATTCAGCCCACGATGCAACCAATGTTTGTACGGT
TCAAATGATGAATGTGTCACCACTCTTCCATTCCAACCAGCCACCACTTT
CCAATGCCCAGACAAATGTCCCCACCGTGGACCTAAATTCACCGGAAACA
TTGCTGACCCAGCTGAAAAACGACAATACGTTGCATGCTGGGAAGGAGTC
ACTGTTGGATGTGTTGCTTGTCCAGGAAATTTGGAATTCAACGAAAGCGA
AAATGCTTGCTTGTTTGAAGGAAAATACATCACTGAACCAACAAAGAACT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000022_pilon | genome | sc0000022_pilon:721787..727341 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 94-576:484 |
| Aaloc | 1-90:5556 |
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