XLOC_044795 (mRNA) -

Overview


Name	XLOC_044795
Unique Name	XLOC_044795
Type	mRNA
Organism	Clytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence

The following sequences are available for this feature:

mRNA from alignment at sc0000022_pilon:802557..808478-
coding sequence from alignment at sc0000022_pilon:802557..808478-

mRNA from alignment at sc0000022_pilon:802557..808478-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_044795 ID=XLOC_044795|Name=XLOC_044795|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5922bp|location=Sequence derived from alignment at sc0000022_pilon:802557..808478- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAACTTAAAATAGCTTGTGTATTTTTACATCTCATTGTAACTTT
AACTTTAGCATTAGAGCAAAATGGGGCGGTTTATAGAGAAGAAATTACAA
ACGCTACAGTCGTCAACAAAACAGAGTTTCATACAGACACGGTCAACCAT
AAGCTTCATTGCCTTATGAGACCATATAGTGTTTGTTTCATTGTGGAAGT
TACTGAAACAGTGCCTGACAAAGAATACCAATGTCGTTTCTACGTCGGAA
AATTTGTGAGTGTTGAAACAGCGCCTGGGCTAGCAACCATCTATGAATCA
TATGCTGCTTGCTCGACTCATCTATGTCAAGACCTACAGGGACCTACACA
TGATACAGACGGTGTCTATGCTATAAAGTTAGGTGGGAGCCCGATCAAGG
TTTGGTGTGACATGACTCAGAATGATGGTGGATGGACGACCATACAACGT
CGCATTGATGGTTCGGTCAATTTCGAAAGATTGTGGCAAGACTATAAAGT
TGGATTTGGAGAAGCTTCAGGGAATTATTGGTTAGGTAACGACCATCTTC
ATCATATCACTGACCACTACCAAAATGTTTTGGTTCGTATTAAAGTCTTG
GCGCCTGATGGAGACAGAGCTGAAATCATCCAGGAGAATTTTTATGTTGC
TGATGAAGCGAATTGGTACAGAGTTCGAACTGGGACATTCGTTTCAGGAC
ATAGTGGTTTGAAAAATGATTGGAACTACCATAATAATGTTGGCTTCACT
ACAACGTAAGCTATTTCAAATTTCGTTCATAGTGGTAAAGGTTTGCCGAA
GTCGAACCGAAAATATCTAACCCAACGAAGTTAGGAGGGGATGCCATAAA
TATTTCACATAAATATTCCCACTTCTTAAAAACAAAGATAATTTTCCCTT
AAAATCGCTAGTTTAGGATCGATAGATGTATAGTTTCGCAAGCTAGACGA
CTAAATTTAATAGAGAAGGTAAAATGATGGTAAGGAAAACCTAGAGGACA
ATATTATACAAACTAACATTATCACATATTAATTATCGCATTATCATAAA
ACATCTAAATATTCAAAAGGTAAAATATAAATATACTAGCCGGTACCCGG
CGTCGCACGCCGGTTTAGCTGTTTGCTGAACGCATTTAAAGTCCTTTGAG
ATGTTGGGAAGATGGCTTAAACACGATGAAATCAAAATTAAAGGGAAGAA
TTCTCTTCAAAGTTTGACTCTATCCCTCCCGGGTGACGCATCTTTTAACC
ATATTTGAAAAAGATTTTTGTGGCGAAAATAATCAGAAAACAGAAAGGGC
GTCATTCCCAAATTACACCATACCGGCGACCAGCGACGTCCGAGACGGCT
CTGCAATTAGATTTTTTTTCTCGCTTCGCTCGCGTTATATTTGCCGTAGT
TCTTGATGTTTAGGAAAACTTTGATGTCAAGATAAGCGGAGTGAAATAAT
AGACATGACACCCTATTCTTCGAAAAGAGGCAGCCCGGGGGAGGGGATAC
TTAGGCAAGAGAAGGGTATAGGTATGTGCCGGCCTTAAGTGTGCCTTTTT
GAAACATGGCAGTTTGAAAAATCGGAAAATAAAACTTCAGTCCCACTGAA
TCTTTTTTGCCCCCAGAAAGATAGAAATTTGGTCAAATTAGTTCCAAAAA
GTGAATTAAAATTCACACAATTTCCCTTGTTTCTTCTCCTCTTTATTCTG
CTAAGGGTCCGAGGGGCAGGGCCAAAAGTCAGCTCGCAACCATAGTCCCC
CGGAAGGCAGCTAGGACACGCAGACAAAAAAGCGTGATAGATAGCGCAAT
TTTATATTGTTTTTTTATAAAATAACTTCGTCATAACTTCAATAATCTTT
CAAATTCAACAATGACTTAGATTTACAGCAAAATGATTATCGACATACAT
GTTTAAAGGTCCGTTTTTACGAAGAAAGAATTCTAGTTTTTGCCGCCTTT
TTACCGCCTTTTACCGCCTACCGCATTTTTAATGTTGCTGTTGTTCTAAC
AAACTTGTTATGTGATTCTTGTGTTTTATTTTATATTTGTTCTTTTCTTT
AACAGATTCTGTTTAAAAAATTTCTTTTGTTTTGAAAAGAATTCGAATTT
CTCAAATCAAATAAGGTCGTTAATTACATTCGAAAACATAAAACAAAAGA
AAAGAAAGAAAAAAAAGAAAAAGTCTAATCTATCAATCAAAACAAAGTCT
TTATAAAACGGCGCGAATATCGTTAAACAAATTTGTGGAGCAAGAACAAA
ATAAAAGTCATCTTTTAAAAGAACAAAACATTGCTTTCGAAAACGAAAGT
GACACACAAAAAACAAACCAACAAAGAAACACACATACAGACTACGGCTA
TTAATATATAGATGAATATACATCACCGAAGGCTAATAAATCCAATAGCA
AACGAAATCCTAATGAATATGTTTTATTATATGCCCAGAGACGAAAACAA
AACATAAATACTCTATTTTGTAGAGAGATTCACATAAAAAGCTCACACAA
AGCGAACATTCGAATGTTTTTCCTTCTAATTGTTTTTTAATGACTTATAT
TCACGAAACTTACAATTGAACTATTATGACTTTCTTTAACAACAACAAAA
TAAAAGTAACAAAAAGTCAATTTTCGAATGCAAAATTATATATGCCCTTT
AATTATTCTTCTCAATTTTCAACAGAAGTAGCCTGAAATGTGATCTTTGT
TTGAACGAAAAATTTGAAATCTCCTTGCGTAAAGACAATTTACTGAACTG
TAGATCTGAACTTATCTCAAAATGCCGGCACATAAACAAACACTTACTCG
AAAACTTCGATTCTAATGATTGACGTCAATTTTAATACATAGTAGGTTTC
GTTGGTTATTGGATTCACATTAACCTTCGATGATCCTGAAATTGTACTAT
CGGCTTCCCCTCGGCTTTACCTATTGATATCTGCTTATTATCCTAGTTAG
CTCCAGTTTAAACGTATATTATCTCCGGCTTTCGGAAAAATTCAAAATTG
ACCTTGCCTTTACAGCAAATTTGATTGAGCTGACCTTAAATTCTTAATTT
CAGAGACGTGGATAATGATAACAGCGATGAAAATTGTGCAGAAAGGAATC
GAGGTGGATTTTGGTATACTGGATGTGTCCGCTTTAATGCTAATGGAATA
TATGGTCGCAATGATAATAAGGGAATTATCTCCAGATCTTTCAAAACCCT
GGTGTCAATGAAGGAAGTCTCTACTGCCGTCAAAAGGAAAGACTGAAAGG
TGGACATCATTTGAAATGGATCATATTCAATTGGAATGATTATAATCGGG
TTTAAACAGTCTGATTTGAGCCAGAGAGCCAACCCAGGTTTGGGCATTGA
AGGTTGACTCGCGGCCTCGAAAATTCGAGAAAATCAAAAAAATAAAACCC
CTAGAGAGTCACAAGGATCAATTATACAAAACGTTAAGCCAAATCGGACT
ATTTCTGAAGTTACCAGCCTAACAAAAGATTTTAATCTCGCTTTGGCGCG
AAACTCGTCACCATTCGTCACCATACCCCGACATTCTTTTTTTATGATTA
AAAAACAGCTAATTTATCTATTCAGTAGATCCCTAGAAACTAAAACTATA
GTTACAGGTAATGTTATTGAAATCAATAATTAATCATATAAAACCAATTC
AGGATTAAAATGCATTATGGGTAATTTTTTCCCTTCAAAATGACAAATGG
ATTCAAGTACTTTTTAAAAATGAATATCAAAACTGACATTTTGAATATTT
ATTTAGAAAGATTTCTAAATTCCCCATTATGATACGATATTACAAAATTT
TTTTCCAAACAAAAATAATGTACAACAAATTTGAATATTCTACATTTTGT
TTTCCACTTGCTGTGGGCAAAACTTCTACATTGGAAGATGGAAATAGAAA
AGCTTGAGAGTTTTGACGAAATGGAATAACCAAGAACAACAGCCACAAAC
ATCGCATCATGGAGAAACTTAAAATAGCTTGTGTATTTTTACATCTCATT
GTAACTTTAACTTTAGCATTAGAGCAAAATGGAGCAGTTTATAGAGAAGA
AATTACAAACGCTACAGTCATCAACAAAACAGAGTTTCATACAGACACAG
TCAACCATAAGCTTCATTGCCTTATAAGACCATATAGTTTTTGTTTCATT
GTGGAAGTTACTGAAACAGTGCCTGACAAAGAATACCAATGTCGTTTCTA
CGTCGGAAAATTTGTGAGTGTTGAAACAGCGCCTGGGCTAGCAACCATCT
ATGAATCATATGCTGCTTGCTCGACTCATCTATGTCAAGACCTACAGGGA
CCTACACATGATACAGACGGTGTTTATACTATACAGTTAGGTGGGAGCCC
GATCAAGGTTTGGTGTGACATGACTCAGAATGATGGTGGATGGACGACCA
TACAACGTCGCATTGATGGTTCGGTCGATTTCCAAAGATTGTGGCAAGAC
TATAAAGTTGGATTTGGAGAAGCTTCAGGGAATTATTGGTTAGGTAACGA
CCATCTTCATCATATCACTGACCACTACCAAAATGTTCTGGTTCGTATTA
AAGTCTTGGCACCTGATGGAGACAGAGCTGAAATCATCTCAGAGAATTTT
TTTGTTGCTGACGCAGCGAATTGGTACAGGGTTCGAACTGGGACATTCGT
TTCAGGACATAGTGGTTTGAAAAATGATTGGAACTACCATAATAATGTTG
GCTTCACTACAACGTAAGCTATTTCAAATTTCGTTCATAGTGGTAAAGGT
TTGCCGAAGTCGAACCGAAACTATCTAACCCAACGAAGTTAGGAGGGGAT
GCCATAAATATTTCACATAAATATTCCCACTTCTTAAAAACAGATATAAT
TTTCCCTTAAAATCGCTAGTTTAGGATCGATAGATGTATAGTTTCGCAAG
CTAGACGACTAAATTTAATAGAGAAGGTAAAATGATGGTAAGGAAAACCT
AGAGGACAATATTATACAAACTAACATTATCACATATTAGTTATCGCATT
ATCATAAAACATCTAAATATTCAATAGGTAAAATATAATTATATGAATAT
ACATCACCGAAGGCTAATAAATCCAATAGCCAACGAAATCCTAATGAATA
TGTTTTATTATATGCCCAGAGACGAAAACAAAACATAAATGCTCTATTTT
GTAGAGAGATTCACATAAAACGCTCACACAAAGCGAACATTCGAATTTTT
TCCTTCTAATTGTTTTTTAATGACTTATGTTCACGAAACTTACAATTGAA
CTATTATGACTTTCTTTAACAACAACAAAATAAAAGTAACAAAAAGTCAA
TTTTCGAATGCAAAATTATATATGCCCTTTAATTATTCTTCTCAATTTTC
AACAGAAGTAGCCTGAAATGTGATCTTTGTTTGAACGAAAAATTTGAAAT
CTCTTTGCGTATAGACAATTTACTGAACTCTAGATCTGAACTTATCTCAA
AATACCGGCACATAAACAAACACTTGCTCGAAAACTTCGATTCTAATGAT
TGACGTTAATTTTAATACATATATAGGTTTCGTTGGTTATTGGATTCATT
AACCTTCGATGATCCTGAAATTGTACTCTCGGCTTCCCCTCGGTTTTACC
TATTGATATCTGCTTATTATCCTTAACTTCAGTTTAAAAGTATATTATTT
CCGGCTTTTGGAAAAATTCAAAATTGACCTTGCCTTTACAGCAAATTTGA
TTGAGCTGACCTTAAATTCTTAATTTCAGAGACGTGGATAATGATAACAG
CAATGAAAATTGTGCAGAAAGGAATCGAGGTGGATTTTGGTATACTGGAT
GTGTCCGCTTTAATGCTAATGGAATATATGGTCGCAATGATAACAAGGGA
ATTATCTCCAGATCTTTCAAAGCCCTGGTGTCAATGAAGGAAGTCTCTAT
TGCCGTCAAAAGGAAAGACTGA

Coding sequence (CDS) from alignment at sc0000022_pilon:802557..808478-

>XLOC_044795 ID=XLOC_044795|Name=XLOC_044795|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000022_pilon:802557..808478- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAACTTAAAATAGCTTGTGTATTTTTACATCTCATTGTAACTTT
AACTTTAGCATTAGAGCAAAATGGGGCGGTTTATAGAGAAGAAATTACAA
ACGCTACAGTCGTCAACAAAACAGAGTTTCATACAGACACGGTCAACCAT
AAGCTTCATTGCCTTATGAGACCATATAGTGTTTGTTTCATTGTGGAAGT
TACTGAAACAGTGCCTGACAAAGAATACCAATGTCGTTTCTACGTCGGAA
AATTTGTGAGTGTTGAAACAGCGCCTGGGCTAGCAACCATCTATGAATCA
TATGCTGCTTGCTCGACTCATCTATGTCAAGACCTACAGGGACCTACACA
TGATACAGACGGTGTCTATGCTATAAAGTTAGGTGGGAGCCCGATCAAGG
TTTGGTGTGACATGACTCAGAATGATGGTGGATGGACGACCATACAACGT
CGCATTGATGGTTCGGTCAATTTCGAAAGATTGTGGCAAGACTATAAAGT
TGGATTTGGAGAAGCTTCAGGGAATTATTGGTTAGGTAACGACCATCTTC
ATCATATCACTGACCACTACCAAAATGTTTTGGTTCGTATTAAAGTCTTG
GCGCCTGATGGAGACAGAGCTGAAATCATCCAGGAGAATTTTTATGTTGC
TGATGAAGCGAATTGGTACAGAGTTCGAACTGGGACATTCGTTTCAGGAC
ATAGTGGTTTGAAAAATGATTGGAACTACCATAATAATGTTGGCTTCACT
ACAACATGGAGAAACTTAAAATAGCTTGTGTATTTTTACATCTCATTGTA
ACTTTAACTTTAGCATTAGAGCAAAATGGGGCGGTTTATAGAGAAGAAAT
TACAAACGCTACAGTCGTCAACAAAACAGAGTTTCATACAGACACGGTCA
ACCATAAGCTTCATTGCCTTATGAGACCATATAGTGTTTGTTTCATTGTG
GAAGTTACTGAAACAGTGCCTGACAAAGAATACCAATGTCGTTTCTACGT
CGGAAAATTTGTGAGTGTTGAAACAGCGCCTGGGCTAGCAACCATCTATG
AATCATATGCTGCTTGCTCGACTCATCTATGTCAAGACCTACAGGGACCT
ACACATGATACAGACGGTGTCTATGCTATAAAGTTAGGTGGGAGCCCGAT
CAAGGTTTGGTGTGACATGACTCAGAATGATGGTGGATGGACGACCATAC
AACGTCGCATTGATGGTTCGGTCAATTTCGAAAGATTGTGGCAAGACTAT
AAAGTTGGATTTGGAGAAGCTTCAGGGAATTATTGGTTAGGTAACGACCA
TCTTCATCATATCACTGACCACTACCAAAATGTTTTGGTTCGTATTAAAG
TCTTGGCGCCTGATGGAGACAGAGCTGAAATCATCCAGGAGAATTTTTAT
GTTGCTGATGAAGCGAATTGGTACAGAGTTCGAACTGGGACATTCGTTTC
AGGACATAGTGGTTTGAAAAATGATTGGAACTACCATAATAATGTTGGCT
TCACTACAACAGACGTGGATAATGATAACAGCAATGAAAATTGTGCAGAA
AGGAATCGAGGTGGATTTTGGTATACTGGATGTGTCCGCTTTAATGCTAA
TGGAATATATGGTCGCAATGATAACAAGGGAATTATCTCCAGATCTTTCA
AAGCCCTGGTGTCAATGAAGGAAGTCTCTATTGCCGTCAAAAGGAAAGAC
TGAAGACGTGGATAATGATAACAGCAATGAAAATTGTGCAGAAAGGAATC
GAGGTGGATTTTGGTATACTGGATGTGTCCGCTTTAATGCTAATGGAATA
TATGGTCGCAATGATAACAAGGGAATTATCTCCAGATCTTTCAAAGCCCT
GGTGTCAATGAAGGAAGTCTCTATTGCCGTCAAAAGGAAAGACTGA

Gene-mRNA-Prot

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
XLOC_044795	XLOC_044795-protein	Clytia hemisphaerica_ch_hm2_pilon	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000022_pilon	genome	sc0000022_pilon:802557..808478 -

Properties


Property Name	Value
Aaloc	757-948:193
Aaloc	1-753:5923

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XLOC_044795 (mRNA) -