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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000022_pilon:1114401..1119066- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044790 ID=XLOC_044790|Name=XLOC_044790|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4666bp|location=Sequence derived from alignment at sc0000022_pilon:1114401..1119066- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGAAAATGTTTGAAAGAATTATATTGTTGCTAGCTTTTGGACTCGT
AATTACTACTACCGGTAGGTGATAAGCTTTTCACAAATAATTTTTCAGAT
GAGATGGAGTTTTTACAACATACTTTAATAATTGGTCATTTAAAGTAATA
AAAATGACACATTCTTTAGAAAAAGTAACAAAATCGTTTTATTACTGGTT
AACGACCAACCAAATTAAATAAGAGCTTGTAAAAACTCCATCTCGTCCCT
AATTTTTCAGAACGAATTTAGGGTCATCGCTTTAGATAACGTCCGGGTCA
GATAACGTCCGGAGAACTGAATAAAATGGTCCTGATTGCTACTGCTTGTC
CCCTTGCAGTCTGTTCCTCTAAAGAATCCTGCATTGTAACACACATGCGT
AATTTGTCGTTCTTTTAAACCACATGCAGTAAATCCCCGTGATAAACAAA
GAGGAATGAATCAGTAGGGGTGCTACAGTCACTTTCAGTCGGGTTTGTGG
ACGGGGAAATATGTCGTTTTTAATGAAATTTGTCGTTCTTTTTGTCTATT
TTTAGTAATGCAGGATTATTTAGATAAACCCACTCCTTGGTTGTTTTTTA
ATTGAAAATTCAAAAGTGGGAAATTCTTTTTTCTATAAGAGCCAGTAAAA
TTTTGCTAAGGCTTCTTATTTTTTTGGGACTTTGAACCTCAAATTGTTCT
TATCCTGTTCTTATTTATAGGGTGTGATTGATGTATTTTAGACGTTATAC
CTAACCTTTACTACTTTACTACTAACCCCTAAATCACTTGAAATTGAGTG
ATTCCCAGGTTCAGCGTTGTTCTTAAATTGTTCTCATTTTATGGCCATTT
TGAGCCTCATTGTTCTTATAAAATTCTTCCAATAAAAAAATAAGTGTAAG
GGATATTTTATTTTTCTACAGCGCTGTAAATAAGGGCAACATCACATGCC
GGTTTTCTGGGCCTTGAGTAGGGACATAGCTCATCTAACGTTTCCAGTTC
ACCCAAATAGAAACGCATGCGTATTTTATCGTTCTTTAAACCGTTAAACG
TTGAACAGCGTAAAATATGAAAAGTAATAAATACAAAGGGGTGGTGTCAC
TTTTAAGGTCGGGGGAGGGGATGGTTAAATATGTCGTATTTTGTTGTTCT
TTTGTCTTTTTTTAAAATGTAATTTGTCGTTCTTTTTAAATGGCCTGGAA
ACGTTAGTTGAACAGTCTGTTTTATAACCCCAGCGCCCCCTATAAATGTT
TTTAAAGCTTAAAAACTTCGACTACCTTGTAGCTTCTTCAACCATGAATA
ATACGGAAAGCTTGAGATCAGTCGATGACAATACTTTTGACCGTATTCAA
ACGATCAACCAGAAGTACGGAGGTAATGCACATTCAATTTCAGCTGTAAT
AGCTTTACAGGGGGACAGGAGGCAAGTGTCCCCTTATTAACGTGGAGAGG
TGGGAATTTTATAAGAACATCCAAAATTTTTTAAACCTTTAGATGTTCTT
AGCTTTTTGAGTTTGAGCCTAAAAATGTTCTTAAAAGGTTCTTAATGTGC
AGTTATTTTAGTATTTTTGCCCATTTCCCTAAGAAATTGGGTGTTTAGGG
TCTGCAAAGCCTTAAAATGTTCTTCAGTTGTTCTTAATATTTTGACCATT
ATATAGTTTGTTTTTATGAAGAAAAAAACGTGCGATTCCTACATGGGAAG
TATATCAACAACAGATTGCGATTCCGACTACAGAAGATAACTGGTTGAAG
GCCAAAAAGCTCATTTTTTTAATGAAAAGCCCCAAACAGTTTTTATCAGT
CATCATCCTTTTGACCTCCCAAATTAAAAAAATTAGCGAGAAATATCAGA
AGAAAATTTTAAAAGCCTATCTGAAACTGAAAATTTCAAAAAAATATGAA
TAATTTGAACCAAGATATATCGGTTGTTATAAAAATCATTTAGTACTAGG
GGTACAATGAATTAATCTATAAAACTTTTTCTTGACCACAGTCGGAGGCG
ACCCGAAGGCTCCTTTTTCGATAGTTATCTAACCGAAGGAAGGGGAGGAC
GCCACTCTTTCTCACTGGATTGCTCCACTTACCCTTGATCCTTCTCTTAA
TTGCTGAGCATCAAGCTGATAGGCATCAAGTACCATTTTAGGAATCATGG
GTATGACCAAGCTTCGGATTGAACCCACAACCTTGCGCACAGTGGCCGGA
TCCTCTACCACTGCACTACGATCGCTTTCTTATTATAAACATTACAGAAA
AAGATGACATTGTTGAGGCAGACATCAAGATGAATCCAAAAATCCAAAAA
TTACTGAGTCAGCAAAATGAGCAAACCAGTGGTGATAAACAACAAACTGG
ATCGAAACGAAAGATTTTTCAATACATGCTTAACCAATGGCCAAACGCAA
CTGTACCTTATGTTTTCGCCTCCGCATTCGGTAAGGAAAGCCCTTATTCA
AGATTATTTATCTGCAATTTCATCACAAACTTTTAACGGCTACCCGGACG
AGTAGAGTTTAGTAGTAGTGTTTTAAGCCTACGGGTGTATTTGACTTTTT
TAGTTTTAAGGCTAAAATGTTCACTATTTTTTGAATGTTTTTTGTGCGAT
TCCCTAATAAATTGGCTGTTTTTTTTAGTCCACGAAGCCTTGAAATGTTG
TTAACTTGTTCTTAATAATATCTTGGCCATTAAAGCCTTATGTTTTTATG
AAAAACGTGAAGAACTACAAAAAATCTTTACTTTACCATAACATTTTTTT
TTTTACTTCAGAATGGCGAAAAGAAGTGAAACAAGCGATTGGAATAATCG
AATCAGTTTCGTGCATCCGATTTATACGCAGAACCGATGAGAAGAACTAC
ATCCGATTCGTTCACAGTCTCGGGTAATTTTTTGTATGAATATACTTTAT
GAGAATATTAATAATGCAAAATTTGGCCCAAAAGAGTAACAATATAGTAA
GAATAACACCATCATGGTATTTGGTCACTGAACCTAAGAATGCCATTTTT
TAGAGAATTTTTAACGGTAAATTGCCAATTATTCCCCAGCAATGCTAAAT
AGTTCAACAAAATTTTTGCTTGAGGTATGTTTTACATGCTTGATTTTGAC
TGGAATTGGATCCAGACCTAAGAAGACTAACCGTAACAAACCTTTTTAGT
CAGCAGAGAAGAGTTTGGTAAGGCTATATAGAGGCAGAAGTGTCCTATTA
TAAATGTTTTGAGCTGTTTGGAAGAGAATGAATTCATAAACATTTCATAT
ATTGGAATTAAAGGTGTTGGTCATTGGTGGGAAAATTTCGTTATCCGACG
CGTCAACATATTTCACTTGGTCCTGGCTGCAACAACCAAGGCATAATATT
ACACGAGCTACTACACGCACTTGGATTTTTCCATGAAATCTCAAGAGAGG
ATAGAAATAAATATGTCAAAATTAACTGGGATAATGTAAAGGGTGAGCGC
TTAACTGTGTGTATTATATTCTTTCTGAGAAAGGATTGTTGCTAGAGATA
AGGTTGGATAAGACCCTAATGGCAGTTTCTATTATATTTGGTGAGTACGT
CAACTTGGGATATGTAAAGAAGAGCTGAAGGTCGATTTTGGACGTAATAA
TTGTGGCCCAAATTTAGCATATATTCTATCAATAGATTGAACGTTGTTAA
CATTCTTGAAAATTATGGTCAAATTATGGTCAAAGATAATTTTGTGTAGC
CAATTTTGACCCTCAGCTTGCGGAGAAAGGAAAGTATCATTAGATTTTCA
ACACTAGCAGCCAGTCATCCAAAACAGACGCTAACAAAGTACTTTTTCAC
TTTCTAGGAGGAATAAAAAATATCAACTTTTCGAGATGGAAAATATCGAG
CAGTGAATATTTTGGCGGGAAATTTGATACCCAATCGATTATGATGTACG
GAAAGTAAGTTTAAAACTGCTTCTCTTTGTTTGACCCAAAAGAAAATAAA
CAAATTGAATTCTGGTCAAGACATACAAAATTCTCGGGAGATCTCTTGAA
GGGTTAGGTGGTAACACCAATCACGATTCTGGTTTATTTTCAAAAGGTTT
ATAGACGCCCACCTCGGGCCTGTGAGCTTGTATACTTTATAATAACGACC
ATCAAGGCTCTTAGACGTGATTTTTGTCATGGTCCAAGTATTGGAGCCAT
TTATAGAAAGAATATGCTCGACGGGACTTTTGAAAGTTTAAAGTTTGATA
GTGTTAGTGTTAATGAAACAAATATTGATTCTTCTCTGCTTGATATTTCA
GCTATGCCTTTGCGAAAGACTCTAACTACATGACAATGATTTCTAAAGAG
AGGCCAACAGATCTTCTTGGACAACGCGAGGGTTTATCACAAAATGACAT
CGTACAACTAAACAACAAGTATAAATGCGATAAAAACTTATGTAGAGACA
AATTTGGTATTTGCTCCAAATATAAGCACATGTGTAATGATGCAACGTGG
TTCGAATTTCGTCCAAACTGTGCTCTAACATGCAAAGTGTGCAAGCCGCA
AAAAGATACACATACGGATAACTCAACTGACGTAAAAGGTACTGACAGTA
TCATATTGAGTGATTCAAAAGGACCGACCACAAACAAAACGACCACCTTT
AAAAAGACAACGACCATTCCTACGAATGACGAAAATATTGACACCGAATT
TGAAATTTCATGGTAA Coding sequence (CDS) from alignment at sc0000022_pilon:1114401..1119066- >XLOC_044790 ID=XLOC_044790|Name=XLOC_044790|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2280bp|location=Sequence derived from alignment at sc0000022_pilon:1114401..1119066- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGAAAATGTTTGAAAGAATTATATTGTTGCTAGCTTTTGGACTCGT
AATTACTACTACCGATGCAGAAAATGTTTGAAAGAATTATATTGTTGCTA
GCTTTTGGACTCGTAATTACTACTACCGCTTCTTCAACCATGAATAATAC
GGAAAGCTTGAGATCAGTCGATGACAATACTTTTGACCGTATTCAAACGA
TCAACCAGAAGTACGGAGCTTCTTCAACCATGAATAATACGGAAAGCTTG
AGATCAGTCGATGACAATACTTTTGACCGTATTCAAACGATCAACCAGAA
GTACGGAGAAAAAGATGACATTGTTGAGGCAGACATCAAGATGAATCCAA
AAATCCAAAAATTACTGAGTCAGCAAAATGAGCAAACCAGTGGTGATAAA
CAACAAACTGGATCGAAACGAAAGATTTTTCAATACATGCTTAACCAATG
GCCAAACGCAACTGTACCTTATGTTTTCGCCTCCGCATTCGAAAAAGATG
ACATTGTTGAGGCAGACATCAAGATGAATCCAAAAATCCAAAAATTACTG
AGTCAGCAAAATGAGCAAACCAGTGGTGATAAACAACAAACTGGATCGAA
ACGAAAGATTTTTCAATACATGCTTAACCAATGGCCAAACGCAACTGTAC
CTTATGTTTTCGCCTCCGCATTCGAATGGCGAAAAGAAGTGAAACAAGCG
ATTGGAATAATCGAATCAGTTTCGTGCATCCGATTTATACGCAGAACCGA
TGAGAAGAACTACATCCGATTCGTTCACAGTCTCGGAATGGCGAAAAGAA
GTGAAACAAGCGATTGGAATAATCGAATCAGTTTCGTGCATCCGATTTAT
ACGCAGAACCGATGAGAAGAACTACATCCGATTCGTTCACAGTCTCGGGT
GTTGGTCATTGGTGGGAAAATTTCGTTATCCGACGCGTCAACATATTTCA
CTTGGTCCTGGCTGCAACAACCAAGGCATAATATTACACGAGCTACTACA
CGCACTTGGATTTTTCCATGAAATCTCAAGAGAGGATAGAAATAAATATG
TCAAAATTAACTGGGATAATGTAAAGGGTGTTGGTCATTGGTGGGAAAAT
TTCGTTATCCGACGCGTCAACATATTTCACTTGGTCCTGGCTGCAACAAC
CAAGGCATAATATTACACGAGCTACTACACGCACTTGGATTTTTCCATGA
AATCTCAAGAGAGGATAGAAATAAATATGTCAAAATTAACTGGGATAATG
TAAAGGGAGGAATAAAAAATATCAACTTTTCGAGATGGAAAATATCGAGC
AGTGAATATTTTGGCGGGAAATTTGATACCCAATCGATTATGATGTACGG
AAAGAGGAATAAAAAATATCAACTTTTCGAGATGGAAAATATCGAGCAGT
GAATATTTTGGCGGGAAATTTGATACCCAATCGATTATGATGTACGGAAA
CTATGCCTTTGCGAAAGACTCTAACTACATGACAATGATTTCTAAAGAGA
GGCCAACAGATCTTCTTGGACAACGCGAGGGTTTATCACAAAATGACATC
GTACAACTAAACAACAAGTATAAATGCGATAAAAACTTATGTAGAGACAA
ATTTGGTATTTGCTCCAAATATAAGCACATGTGTAATGATGCAACGTGGT
TCGAATTTCGTCCAAACTGTGCTCTAACATGCAAAGTGTGCAAGCCGCAA
AAAGATACACATACGGATAACTCAACTGACGTAAAAGGTACTGACAGTAT
CATATTGAGTGATTCAAAAGGACCGACCACAAACAAAACGACCACCTTTA
AAAAGACAACGACCATTCCTACGAATGACGAAAATATTGACACCGAATTT
GAAATTTCATGGTAACTATGCCTTTGCGAAAGACTCTAACTACATGACAA
TGATTTCTAAAGAGAGGCCAACAGATCTTCTTGGACAACGCGAGGGTTTA
TCACAAAATGACATCGTACAACTAAACAACAAGTATAAATGCGATAAAAA
CTTATGTAGAGACAAATTTGGTATTTGCTCCAAATATAAGCACATGTGTA
ATGATGCAACGTGGTTCGAATTTCGTCCAAACTGTGCTCTAACATGCAAA
GTGTGCAAGCCGCAAAAAGATACACATACGGATAACTCAACTGACGTAAA
AGGTACTGACAGTATCATATTGAGTGATTCAAAAGGACCGACCACAAACA
AAACGACCACCTTTAAAAAGACAACGACCATTCCTACGAATGACGAAAAT
ATTGACACCGAATTTGAAATTTCATGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000022_pilon | genome | sc0000022_pilon:1114401..1119066 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 727-1140:415 |
| Aaloc | 631-723:858 |
| Aaloc | 451-627:1403 |
| Aaloc | 340-447:1904 |
| Aaloc | 157-336:2418 |
| Aaloc | 67-153:3383 |
| Aaloc | 1-63:4667 |
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