XLOC_044782 (mRNA) -

Overview
NameXLOC_044782
Unique NameXLOC_044782
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000023_pilon:1133315..1134376-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044782 ID=XLOC_044782|Name=XLOC_044782|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1062bp|location=Sequence derived from alignment at sc0000023_pilon:1133315..1134376- (Clytia hemisphaerica_ch_hm2_pilon)
TACGAATACAGTGTCAGATGTAATCAATGTTTGTTCAAGAAGAACGAAGG TGACAAATTTTAAAAATTCTTCATTTTTCTAAGTGAAAAGCTGAGATCTT TTATTAAATGAATTAACGGCAAAACGCTAAAAATGGCAGCTTCTTCTTCT CCAGATGTTTATAAGATTTTTTTCCCATTCTATAATTAATGATTCAATTC CTGATTTAATTGCTGAGCTTTCAATCAACAGCATTTACAGAACCAAGGAT GCAATAATTTCGCCGCTACTGGAACGATTGTCTTACCATTAACCCTTCTA GCATCTTTGAAAACTTTTTACATAACTTTTGGAATGTGTATCCAATGGGC TTGAAAATTTTTTTAAGTGTGCTTTCAAGTGTGCACCAAATATGAATTGG TATCTTCGGTAAAAATTTAAGCATCATTAATGACGCCATTGTGACTTGAT CATTCTTTGAAGTGCCGAAAATAAGACCCTTCTCTAACTTTCTTTCACTC TGATTTTTTGCTTAAATTTTGTTAAACGCAGGGTCAATTCATCGCCATCT GCTGGCATCGTATATTTTACAGACCGGTAGCTAAAGCAAAATAATCTGCC ATCTTCGATAAGTAGACACAAGTTTGGTGCCGGCAATTTGATCGATCAAA CCAATCTTTCACCTCGTCGCTTTGCTTCATTCAGGTTTTTTTGCCATTGT TTGAGAAATACTGAGTAGCTCTATTTAGTATTTTATTTAAGATATCTATG GCCCTAGGTTACTGTATCTTTATTATTTTGACAGATGGATGTGATGGTGA GAACCAATCGTTACGTCTAATCGTCTCCAACTTCTTTTGTCCTGATGCAT GCTCAGAAAGAGAGGACAATAATCTCACTGGTATGGTTGCAGACCCTTAC AGTAAACGACAGTTTGTAGCCTGTTGGAAGGGGAAGACTATAGGTTGTTT ATCCTGTCCAAGAGATTTGATTTATAATGAAGAAGAGAATGAATGTCTTT TTGAAGGTGGATTTAGAAGTGAAGGGGAAAATGACTACATTGATTGGTTG GCTTCCTTCTAA

Coding sequence (CDS) from alignment at sc0000023_pilon:1133315..1134376-

>XLOC_044782 ID=XLOC_044782|Name=XLOC_044782|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=654bp|location=Sequence derived from alignment at sc0000023_pilon:1133315..1134376- (Clytia hemisphaerica_ch_hm2_pilon)
TACGAATACAGTGTCAGATGTAATCAATGTTTGTTCAAGAAGAACGAAGT
ACGAATACAGTGTCAGATGTAATCAATGTTTGTTCAAGAAGAACGAAGAT
GGATGTGATGGTGAGAACCAATCGTTACGTCTAATCGTCTCCAACTTCTT
TTGTCCTGATGCATGCTCAGAAAGAGAGGACAATAATCTCACTGGTATGG
TTGCAGACCCTTACAGTAAACGACAGTTTGTAGCCTGTTGGAAGGGGAAG
ACTATAGGTTGTTTATCCTGTCCAAGAGATTTGATTTATAATGAAGAAGA
GAATGAATGTCTTTTTGAAGGTGGATTTAGAAGTGAAGGGGAAAATGACT
ACATTGATTGGTTGGCTTCCTTCTAAATGGATGTGATGGTGAGAACCAAT
CGTTACGTCTAATCGTCTCCAACTTCTTTTGTCCTGATGCATGCTCAGAA
AGAGAGGACAATAATCTCACTGGTATGGTTGCAGACCCTTACAGTAAACG
ACAGTTTGTAGCCTGTTGGAAGGGGAAGACTATAGGTTGTTTATCCTGTC
CAAGAGATTTGATTTATAATGAAGAAGAGAATGAATGTCTTTTTGAAGGT
GGATTTAGAAGTGAAGGGGAAAATGACTACATTGATTGGTTGGCTTCCTT
CTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_044782XLOC_044782-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023_pilongenomesc0000023_pilon:1133315..1134376 -
Properties
Property NameValue
Aaloc52-327:277
Aaloc1-48:1063