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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:1412369..1417254+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044761 ID=XLOC_044761|Name=XLOC_044761|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4886bp|location=Sequence derived from alignment at sc0000002_pilon:1412369..1417254+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATAAAGAAGAGAAGGTTTATCTCGCACGTTTGGCTGAGCAAGC
TGAGAGATATGAAGGTAAAtacatattattttattttcacatattttttg
acatctcatctctttgccttttctttttacagatttggtaggtctttcat
tttgCCTTTCAGTTGAGAAAGTTAcctactctcaggtgcctaataaactt
GCCCCcacgcttattaatttttcgaaaaatttcttatcaagtattttttt
tagATAGACTGCTAATAGATAGACTATTCTATTATAttctattatggttg
agttacaggaggctctgggagcccattctcgcaactatagatgctttgag
taagcatcccgtcagcaccttgaactgactacccaattctcccacatggc
atgggttgacccgggcgaaggcaaggtttgttcacttgccaaagtgaacc
gttgtgagtgggaatcgaaccttggtcgcctgtacaggaatcaaggttga
tgtccactataccacaaAGACCTTTTCGCCACATTTCGCTAAATGCTCAG
AGCGCGACGGCCCAtttccctttcctatctttcacctTACCTGTTTAATC
Ttctttctgagacttagtttctcatttctgactgagtttttatacctgtc
aatcatttgtccatcaatttcgaccagactaattttcgcaccgagtggga
ttcaaactaccaccaaagaaagaccttcagttTCGGAAGCCAttgcgcta
tccgttgagccattgCCGCACAGCCtaatcacgcaattcataacatatta
taccaaactggcaaaagacgggggtgatgttattataatatgggtaagaG
TACCCCTtgtttaaacctgactgaaattggAGCCGTTACtaacaaccctg
cggggcccaaggcgccgagtatgcacccggcacagtgacaagccgttact
agcaaccctgaccctacctcccaataccccctgaatcacagaatgacgga
taggaaaaattatcggggaaaaaaattgctCGTCGCGCTCTGAGGAATCA
GCGAAATctttttcgcctttccatccgccatcttgaattgtatgcaaaaa
tacaggaacgaaaaagccgtggttggatttagttggaaaatatgcacaac
atatgcaagtttacacaaagattaaaaagtcaacaaagcatcttataaag
aaatattataatcattagaacaataaaagatggaatttcttaatccaaaa
agaaatatttacagaacaacaaaagccttttagaaatttgttcttataaa
gacatagcatattctgttttcatgccattaaaaaaatccacgaagacgga
gtacacacatcaactttcaaaacacgcaaactgaaagtagtaattatgac
gtcacacattcagcaggctcagatcaatgttttgatttgttcgTTTGgtg
gctctattcccaggaaaataatttaccgtcagccgtataaggattatttt
tgtaccttcggtgatttttcagcttgagtttatgtctaatgttatggttt
tttgaagtgcttgttctaagacaTATGAGcgaattttattatttctagtt
ttcaaaagaagcaaatttaatctttcttctacaagtttacattttaatat
aatgccaattatgcatgtaagttttatattaatactttctttttgcatat
gttttacatactttctaagggaatttcaccacggcaattcggccaccata
atttttgcatacaattcaatatggcggatggaaaggcgaaaaggtctatt
catgtAATAGTACAGTACTGTACTTATTTTACAAGAGCTTGTTACAGTTA
TTTTTGTTCTTTCGTTGCATTTTCATCTTTTACTTGTATTAAAACATTTA
GTCTTATTGTTGTGTTAgacggcaatcacaaatatcttcattttgcgtcc
tcgttgggtctaaaaagtgagttaGTCAGTCGGTTGGTTGGTCGTaaaaa
ttctgaagaagcaggaaaaaatctggaaaaaacaaaTTGTTATTTTAGGA
GTGGATAACAATCCTTGATATTCAAAAAACTCAACATCCTTACTGTATAT
ACAAAAGTTATCTTTTTGATTGAATCCCAAACATTTGTCTTAAGTGTTCA
CTTTCTCCACAATATTAATAATTTACATGTAGTACACTTTCGGTCAGTCG
GGTTCATATACGCATGGTTTTTTAAACAACAATCAAAACTATCTGGGGGT
AAGTGTAACACAGATTATTCTTAAAAGTAAAgaagtatcttttggcattg
acaatcaaatataatatattatatacattatatatattttcttaattaaa
aaatacaaaaaaacaattttgcatttgtgaaaaataaaaataaagaaatg
atgAATTAATACCATCAACGGGTCTTACTTGggatgattggttgaaacat
agTACCATAGGGTGAAAACACGACTTAGTAAAGCGATGACTTACTACAGC
ACCGGAAAATTTTTAACCCACATAGAAACAAATGGCTGTTGCTAATGAGC
TGGTTCATCCTTTCAATCATggttttttttagtaaacccatgttaagatt
aggctacaatctatcacatgctgctttatttgaaaatctataggctgtct
ggaatttcgaataatagaagaaattgcgattttttgaCAAGGTTACAAAT
TTTTTCCTTGAAATCAGCATACACCATCTGAGGTTTTTAGCTTTCTAGtg
ctaaaatttgtttttagctaccatttccagctcattagtgATACAGTAAG
ccaaagtttaacagtcattgggccgattttcagaccgcgccagtGAAACT
CTGTTCCGCATTTCATCTGCCATTTTCAGtgctttcgaaaaattatttct
tgctggcacGGGGTAAGCAGACAATTCTTTGCAAAGgggattttttgtgt
tttgaatataaaataactttggaaatacttaaccaattttaaggacacat
aaaagtactgacaaaatttgtaaacaaaccgcatgccagcgggatacaaa
atcaaaacaaatgtcacatatcaaaacaaaaagtaaaaacaaatatggct
gattttgattgttcaattgtttttacaagtttcttttggacacgtgattt
taattgttctctttaatgacacgtggtggTTCaagcaatgtttacatttt
actacttttatgtctctttaataaatgacccctcatttttctcacaaagg
taaggactttcaattaaaattagtttggttttcaaaaattaagtggaaaa
ttttggcctgtccactcTAAACGtgggattgttgatatctggcctttATT
TTCGCATATTTTTatatctctttgacaacaaatttgttttgataattcca
ccaagtttatcaatcatgcTTTCTGTTATAACATTTCACAATAattttca
ctgatagcgcgccctttttgattttttgttttcattcaaaatgactggcT
GCCAATTGGAAAATCAGGGAGCGCCTGCCACCTAACTGCCTCCCGCCCGA
TATGAtgaacaaataacgagtgtgtaacttgctgcgTGAATAACAAGCCT
TTAATAAAAGCAGAATTTTCGTGAAATTGGAGTCAGATTTAGATTTTCTG
TCCAGATTAACAAAAGCTGGTTGTAACACTGCATATagcaatatttttga
tttttcttttgttttcatttagaaATGGTTGAATACATGACATCCATAGC
AAAGATGGATGTTGGTCTAACCCAAGAAGAACGCAATTTGCTGTCTGTTG
CTTTCAAAAATGTGATTGGGGCTCGTCGTGCATCTTGGAGGATAGTTTCG
AGTATTGAGGAAAGCCGCAAGGATACTGAGGAGAGTGCATTGGCAACTGA
TTACCGTAAAAAGATTGAGACTGAATTGCAGCGGATTTGTAATGAGATTC
TCGATTTGTTAGAGAAACATTTGATTCCAAGTTCGACAGTGGAAGGAGAT
AGTACCTCAGCAGCATCAAATACAGAGCAAAAAGAAGCTCATGTCTTCTA
TTATAAAATGTAAGAAAACCTCCTTCTCCTTCAAAGACCAAACTTTGTTA
CTTCACTTCTCAGTCTTCTATACttcaatttgaatgaaaaacaaaaaaat
ttctaaagaggtaaaaggtaaaaacattttaaaattacGGCCCTCACTAA
TCAGTAATAATTATggttaaaaattacaattattCTCATTCCTTTCAAAA
TCAGATATAACCATTGACCTTTATATAGACCCCATAGCCAGTTTCCCAAT
CCCgtccaagcaaaatattttgatcggagttttttttaagtggtacctgc
atcgagagcgctaggtctacttctCTTGCACAGTTGTGGTATAGCGCCGT
TTGTCATTAGGTAAGATTTTAACATACAATGCCTTTTTTGCGAGTACCCC
TTAAAAaatctccgatcaaagatggcggatatagcgaATTATATAATGAA
TAATAGAATTATTTAACCAAGTTTAATTTATTCTCAGGCAAGGTGATTAC
TTACGATACAAAGCCGAATTCACAGCAGGGAATGACAAGAAAGAAGCGGC
CGAAGCATCTCTACTTGCTTACAAAACAGCTTCAGATGCTGCTGCTACCA
ACCTTCAACCCACGCATCCAATTCGTCTTGGTCTAGCACTCAATTTCTCT
GTCTTCTACTATGAGATTTTAAACGCTCCTGATCGCGCGTGCAAACTAGC
TAAGAAATCATTTGATGAAGCTGTTGCAGAGTTAGACGGTTTACCAGAAG
AGAGTTATAAAGATTCAACACTTATCATGCAGCTGTTGAGGGACAACTTA
ACTTTGTGGACTTCTGAAATATCAGGTGGTGAAGGT Coding sequence (CDS) from alignment at sc0000002_pilon:1412369..1417254+ >XLOC_044761 ID=XLOC_044761|Name=XLOC_044761|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1500bp|location=Sequence derived from alignment at sc0000002_pilon:1412369..1417254+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATAAAGAAGAGAAGGTTTATCTCGCACGTTTGGCTGAGCAAGC
TGAGAGATATGAAGATGGCTGATAAAGAAGAGAAGGTTTATCTCGCACGT
TTGGCTGAGCAAGCTGAGAGATATGAAGaaATGGTTGAATACATGACATC
CATAGCAAAGATGGATGTTGGTCTAACCCAAGAAGAACGCAATTTGCTGT
CTGTTGCTTTCAAAAATGTGATTGGGGCTCGTCGTGCATCTTGGAGGATA
GTTTCGAGTATTGAGGAAAGCCGCAAGGATACTGAGGAGAGTGCATTGGC
AACTGATTACCGTAAAAAGATTGAGACTGAATTGCAGCGGATTTGTAATG
AGATTCTCGATTTGTTAGAGAAACATTTGATTCCAAGTTCGACAGTGGAA
GGAGATAGTACCTCAGCAGCATCAAATACAGAGCAAAAAGAAGCTCATGT
CTTCTATTATAAAATaaATGGTTGAATACATGACATCCATAGCAAAGATG
GATGTTGGTCTAACCCAAGAAGAACGCAATTTGCTGTCTGTTGCTTTCAA
AAATGTGATTGGGGCTCGTCGTGCATCTTGGAGGATAGTTTCGAGTATTG
AGGAAAGCCGCAAGGATACTGAGGAGAGTGCATTGGCAACTGATTACCGT
AAAAAGATTGAGACTGAATTGCAGCGGATTTGTAATGAGATTCTCGATTT
GTTAGAGAAACATTTGATTCCAAGTTCGACAGTGGAAGGAGATAGTACCT
CAGCAGCATCAAATACAGAGCAAAAAGAAGCTCATGTCTTCTATTATAAA
ATGCAAGGTGATTACTTACGATACAAAGCCGAATTCACAGCAGGGAATGA
CAAGAAAGAAGCGGCCGAAGCATCTCTACTTGCTTACAAAACAGCTTCAG
ATGCTGCTGCTACCAACCTTCAACCCACGCATCCAATTCGTCTTGGTCTA
GCACTCAATTTCTCTGTCTTCTACTATGAGATTTTAAACGCTCCTGATCG
CGCGTGCAAACTAGCTAAGAAATCATTTGATGAAGCTGTTGCAGAGTTAG
ACGGTTTACCAGAAGAGAGTTATAAAGATTCAACACTTATCATGCAGCTG
TTGAGGGACAACTTAACTTTGTGGACTTCTGAAATATCAGGTGGTGAAGG
TGCAAGGTGATTACTTACGATACAAAGCCGAATTCACAGCAGGGAATGAC
AAGAAAGAAGCGGCCGAAGCATCTCTACTTGCTTACAAAACAGCTTCAGA
TGCTGCTGCTACCAACCTTCAACCCACGCATCCAATTCGTCTTGGTCTAG
CACTCAATTTCTCTGTCTTCTACTATGAGATTTTAAACGCTCCTGATCGC
GCGTGCAAACTAGCTAAGAAATCATTTGATGAAGCTGTTGCAGAGTTAGA
CGGTTTACCAGAAGAGAGTTATAAAGATTCAACACTTATCATGCAGCTGT
TGAGGGACAACTTAACTTTGTGGACTTCTGAAATATCAGGTGGTGAAGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:1412369..1417254 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 403-750:4539 |
| Aaloc | 67-399:3725 |
| Aaloc | 1-63:1 |
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