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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:1330762..1336334- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044757 ID=XLOC_044757|Name=XLOC_044757|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5573bp|location=Sequence derived from alignment at sc0000002_pilon:1330762..1336334- (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTCACAGACATCGCAGATAACAACGGCTACACTCCTTTCGACTACGC
AAAACAAAAAAATCTCAATTACTGTCTATTGGTCATACTCTCGCACCTCA
AGTTTCGTAATAAGGCCCTGAACAGTCATAACAAGAACAACCATACGGCT
CTTGACACACGACAACAACAAATGAACAACAAAACTCAAGATACGGGAGC
ATTAACAGTACCCAACAACCGTCAAAAACGAGATAAATCTCCTGATTTAC
GGCAACCTTGTAAGACTCTGAACACACCAAGCTTGAATAAGGCTGAAGAC
ACACGACAAAGGAATAAAAGCCCGCAAAGAGTGAACGAATCGAATGCAAC
TTTTGAAAAACGTTCGACTAAACAGGTTGAGGATAAACGAAAATTGACGA
GACAAGATGATATATCAACAAAAGACTCCAAAAAAAGGTTAGTTTAAAAC
ATCAACATATATAGGCGGGGTCGAAGAACGGTCGAATAATCAAATTTGTT
CGAATTACGAAGGACTCAAACTCAGGAGTTTTTCCAAAAGTATTGCTAAC
CGAAGAGATCTGGTCAGTAAACCTTTTTGGAAATGAGGAAACTTCAAGTA
TTAAGCTCTGACCGTATCCCACCTTAAGAAGACCGCGAGTATTGGTTTGC
GGAGCTAACTAACACCATTTCGTTACATGTTTTTTAATGAGAACATCTAA
AATTTTCCTTGTTCTTATTTTCACCATTTTTGTGAGCATTTTTGCCTATT
TTCTTAAGAAATCGGATGTTTTAGAGTTCACAAAGCCTTAACATGTTCTT
AGGTTTCTTCTTCTTGTTCATCGAAGACTTATGTTTTTATATAGTTTGTT
CTTATAAAAAGTTTTTTCTCATAAAAAGTGTCATACTTTTATCTCTTCAG
TTCGTCCTCCAATCAACCTCAACTTCGTCCAAGTAACGAGCAGGATAACG
AGTTCGAAGATAGTGACGGCCAAGCTTTTGATATCCCGCAAGGTGACCTC
GAAAAACTTCGTCAAAGTCAAAATATCGAATCTGCTGTGGAAATTACGAA
CCAAAAAGTTTCAGTTACGCGGGACCAAACATCAGTTACGCGGGACCAAA
CATCAGTTACGCGCAACAATCAGCAAACTTCGGACTACAGTAATTCAATG
TCATCAGATGGTGGTTCAGATTACAATTTCAACGATCAGTTGGTTGTTTT
GGTTCAACATCAAGGTTCTGATGATGAATTGGTCATTGATGTTGATGCGC
ACAACTCAAAGTATGTAATATTTTCTTCCCTTGTCTGTTATACAGGTCCT
ATATCTACGGAAATTTTAAAATTCATTGCCGTGCTACGCTACGTTAACGC
ACAGATATCGTATTCTTTTACACACTAGGTAGGCTTACTGCTCAGAGATT
TCCCGTATAATTGTGTCTAGTCCGCCATGTTGTTTTCTATTTTACCTTGG
ATTTTCGTTCAAAACATTTGAATCGAAAACAAGATGGCGAACTAGTCAGC
TATTAAACTGGACACGTTTCTTTTTATATGTTATGGCTGTTTATTGTTTG
TTTGTTTTTCTTCGATACGAATTTGTATAAGACTGCACTCGTCTACTGAA
AAAAGTTGTGCACTTTTTGCAAAAAGCATTAAAATTTCGATACTCTAATT
CCCCAGATCTTCTGGAGCAGATGACGTGGATGGTTACCAAGACAATCTTC
ACGGGGATGAAGAAGAAGATCTGCTGGATATCCCTTTCGCTCGCAACGGG
AGCATCACTACAATAGGGGTGGTGTCTGAAGGGAGCATGGCTTTCAATAG
CGCATCCGTCGACCCGAGTGTCTCGAGTCTGATGAATAGCAGTTCAGTTG
AAGAGAATGATAAATCGGTACGTTGATCTTTTTTCGCTTATTTACTTACA
GCAAACTACCGTGTGACCCACAAAAAGATATTATGGTTTAATGAAGGAAG
ATGGATGACGTAGACAGCCCAGTAATTTAGGATTTTAAGACAGTCTTTTG
TTTTCACGGGGTCCACGGCCTATTAACTGAAAGGAACATTGCAAACTGCG
TCCGAATTATTCACTGTTCTGTCAAATCATTTTTCCATTTTAAGAAAGGA
AGCACAAACAACCTTTAAAGTTTAGTATATGACTTTTTAGATTCATAGTT
CAACATTTCTCAAGTTTAACATTTTGAATTCTCAAAGCCAAAAAAAAGGT
TAGCAAATTGAGCCTTGGTGTGGTATAATCTGCTTCTACTATCCCAATTC
TTTGAATTCTGTAAGGTTTTTAAATGAACAAGGCTTCGTTATTCGATAAA
GATATGAATATCGTTTTGAAACTCTTTTTTACCTTTAGCAACCACCGTCT
TCAAGGCGTAGTCCTTCAAACTCGTCCAAAAAGAACTCAAAGCCACCAGG
ACCCACCAAAACTGACTACAGTCCAAGACTTCCCCTATCTTCACCCTCCG
ATCTTACGGCGCCCATGCCACCCCCGTCACATTACTATGGTAACCAACAT
GGGAGTCACAGCCCTGTACCAGCTGATAACTACAGGTAAATTTCTCAGCC
TAACAAGCGAATCCTTTTTCTTAGCAGTAGTGCTAAAGCCCGGGGGGGTA
GAGCGACCGTAGCATAAAGGTAGAGCATCCAGCTACGGTGCGCAAGGTTG
TGGGTTCGATCCCCAGCCGGGTCATACCAAAGATTCCCAAAATGGTACTT
GATGCCTCTCTGCTTGATGCTCAGCAACTAAAGAGACGGATCAAGGGTAA
GTGGAGAAATCCAGGGAAAGGAGTGGCGCCCTCCCCTACCTTCGGGTAGA
CAGCTATACGAAAAGGGAGCCTTCGGGTCGCCCTCGGCTGCGGTCGCAAA
CTTACTTTACTTAGGCAAAATGGGTGCCGGGTATGTGCGAGCCATAAGAG
TCTACTTTCACACCCTCGAAAGTCTTTTAAAGGGGTACAAAAACCATTGA
AAAGAAATTTGAGTTCCTGTAAGGATCCAAAAAACACGAAATCCAAAATT
TCCTCTCTCAAAGGGTCGTGATTTTAGTCTCTCTAGGGTCCTAAAAACAC
CACTTTTTCCTCTCTCTAAGGGTCGATTTTCGATTTTTGGCTCGGACATG
ACCCGTCACTTCGCAAACCTAGTACCCCCCCCACCCCGGGCGCTAAAAGG
CCTCAAGAATGATTGGGGGTCAGTGGGGCTTAAATTCAAGTCCAAAGCCT
CTAAACTATGTTTTGTCCAATTAGATAATGATTTACGGTGTTTAAAAGGT
GCAAACAGTGAAAGAAATTCTTCCTTATCCAACCATGATGCGCGTCCATT
TTTCCCAAAGAAATGGCCCTCAGTTCAACGGCTTGTCGGGGCCTATGTGG
TTAGGATTCTTCTCGAAGATCATTTCCTTTAGATGAATAAATGATCATTA
CATGGACCTGGTCTCTGTGACCCAGTGAGCTTTTTTCTGCATGATAAAAT
TAATGAGCTAGGATGCTAATAGACAGATGATCTATTATAGTCTTTATAGT
TTTCATTTCAATTTTTCTTGTCATTCCCAGTGGGAATAAGACTTCCTTAT
TTTTTTCAATCAGTGATCAAATCTTTACAGCTTCTTTCACACCCCTGTCT
CAGCGACCCGGTGAAGCTTTGAAATCCATTGGGGTGGCTATGAAAAAAGT
AATTTAACTGGATTTGAATACCTAGGTTCACGAAAACTCACTGGGTTGAG
GACTCGATTTTCACCGGGGTAGGGATAATCTTTTTCGTTTTTTGATTTGA
CCGGGTTGAAATAATAAATTTCAAAGATTTTCCAGGGTAGAATTTCAATA
TATTTTGCACCGGTTTACTCATAAACCCACTTGGGCTTGAAACTAGACCA
TTTTGGCATTTTTATCCACTGGTTATTTGCTGGATCACTGATACAGGGGT
GTTCTCTCTCACCGGGTGTGGTTCTTTGACCAATTTTCCCAGTGGGTAGA
CATTTTCTTTATAAGCAACTCCAATTTTTGGGCCAGGGCTGGGGTTGCTT
AGCATTCTAGCTCATTTTCTGAAAAATTAGCTTTGACCACCATATTTATG
CTTATTGGCTTAGATTATTTTTAAAGCTTTTACTTTACGAAATAGAGAAT
TTTTTGTTGCTAATTTCAGGGCTCGAGCTTTAGGAACTGGGTTGCTTAGG
AAAAAAATATGTAGAGAGCCACTCGAGGGTGTATAATCTTTTTTATTAAA
CATTTCCTCATCTTCTTCATAGAAGCCAATATGGAGGTCCATCGCCACAA
CATCAAGATATCAATGCAGAGGTTTTAGTCCTTGATGATGATGGAGGAGG
TGAAAATATTACCATGGCACGACCAAAAACATCTGTATGTCAATTATTTT
CTTCTTCTTTTCCAAAAATATGGTGTAGTTTATTTGGTACAAAATGTGTA
GATTTGACGCCAAAATTTGTAAAAAGCAGCTTTTGCTTGAAAAGAAATTC
GAGTTTGACGTATATACACTGCCCTGATGACGAAATTACTCACTAAGTTT
GACTTTTTTGTTCCTCGAGTACAAAAAACGTCTAGTAGGATTTGACGACG
TAGGATTTGACGACGTAGACGGGAACGTAGACGGAGAAGTAGACGAGGAT
GTGGGAACATCATCTAGAACGGATATTATTGAGAAAAATTTGTCACTAGG
TTTTGATTTTTCTGTTCCTTGAGTACAAAATACGTCCAGTAGGATTTGAC
GACGTAGGATTTGACGACGTAGGATTTGACGACGTAGGACGGGAACGTAG
CCGGAGAAGTAGACGGGGATGTAGACGAGGATGTGGGAACATCATCTAGA
ACGGATACTATTGAGAAAAATTTGTCACTAGGTTTTGATTTTTCTGTTCC
TTGAGTACAAAATACGTCCAGTAGGATTTGACGACGTGGACGTGTACGGG
GACGTAGAAATGGGATCGACATCTAGAACGGATACCATTTTCAGTGTATA
AATAAATATTTTGGATAACTGTTTTGTGGCATGATTGATAGTGTAATGTG
TAGTGTTTTTTGATAGAGACTTAACACGTGAGTTTGCAAAGCGTCTAGGT
AAGCTTTGGAACGAAAGATTAGATAGCAACTCTCGTCGCGTTAGTATCAA
TAAGTTATAACTTTTCGAAGAAATGAAGCAAATCACCCAGTGAGGAGGAA
GAACATTGGTAGATTATATTTTTTACAAGACTGAACCAAAGGAAAAAACA
AAGATTTATGAGAACACATTCTCAAGCCTTGCTAAGGTATGAGAAAGTCT
GAAGGTATTAAATTTTCGATTTAATATATTTCTATCTTTAACTGATCGGG
CTAAATCTTTCTGTTAGCTAGTATCAGTTTCAAACAGTTTTAATATGACT
CTCTTTTTCTCATATTCAGAAGGGACGACGTAATCAAACCGACCAACGCT
CATTGACTCGTGATTCATGGCCGCCCCCTAAATCAACGCCACAAAGCCGC
CCTCAAGATGATGAAGCGCCAAAGCAGCAAAAAACATCACCACGAATCTC
ATCCAATGTTCGTTTGGCGCCTTTATCCGTGTCCTCACTTCCTAAACCTC
CTTCGTATCGTTACGATTCATGA Coding sequence (CDS) from alignment at sc0000002_pilon:1330762..1336334- >XLOC_044757 ID=XLOC_044757|Name=XLOC_044757|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3042bp|location=Sequence derived from alignment at sc0000002_pilon:1330762..1336334- (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTCACAGACATCGCAGATAACAACGGCTACACTCCTTTCGACTACGC
AAAACAAAAAAATCTCAATTACTGTCTATTGGTCATACTCTCGCACCTCA
AGTTTCGTAATAAGGCCCTGAACAGTCATAACAAGAACAACCATACGGCT
CTTGACACACGACAACAACAAATGAACAACAAAACTCAAGATACGGGAGC
ATTAACAGTACCCAACAACCGTCAAAAACGAGATAAATCTCCTGATTTAC
GGCAACCTTGTAAGACTCTGAACACACCAAGCTTGAATAAGGCTGAAGAC
ACACGACAAAGGAATAAAAGCCCGCAAAGAGTGAACGAATCGAATGCAAC
TTTTGAAAAACGTTCGACTAAACAGGTTGAGGATAAACGAAAATTGACGA
GACAAGATGATATATCAACAAAAGACTCCAAAAAAAGGCTTTCACAGACA
TCGCAGATAACAACGGCTACACTCCTTTCGACTACGCAAAACAAAAAAAT
CTCAATTACTGTCTATTGGTCATACTCTCGCACCTCAAGTTTCGTAATAA
GGCCCTGAACAGTCATAACAAGAACAACCATACGGCTCTTGACACACGAC
AACAACAAATGAACAACAAAACTCAAGATACGGGAGCATTAACAGTACCC
AACAACCGTCAAAAACGAGATAAATCTCCTGATTTACGGCAACCTTGTAA
GACTCTGAACACACCAAGCTTGAATAAGGCTGAAGACACACGACAAAGGA
ATAAAAGCCCGCAAAGAGTGAACGAATCGAATGCAACTTTTGAAAAACGT
TCGACTAAACAGGTTGAGGATAAACGAAAATTGACGAGACAAGATGATAT
ATCAACAAAAGACTCCAAAAAAAGTTCGTCCTCCAATCAACCTCAACTTC
GTCCAAGTAACGAGCAGGATAACGAGTTCGAAGATAGTGACGGCCAAGCT
TTTGATATCCCGCAAGGTGACCTCGAAAAACTTCGTCAAAGTCAAAATAT
CGAATCTGCTGTGGAAATTACGAACCAAAAAGTTTCAGTTACGCGGGACC
AAACATCAGTTACGCGGGACCAAACATCAGTTACGCGCAACAATCAGCAA
ACTTCGGACTACAGTAATTCAATGTCATCAGATGGTGGTTCAGATTACAA
TTTCAACGATCAGTTGGTTGTTTTGGTTCAACATCAAGGTTCTGATGATG
AATTGGTCATTGATGTTGATGCGCACAACTCAAATTCGTCCTCCAATCAA
CCTCAACTTCGTCCAAGTAACGAGCAGGATAACGAGTTCGAAGATAGTGA
CGGCCAAGCTTTTGATATCCCGCAAGGTGACCTCGAAAAACTTCGTCAAA
GTCAAAATATCGAATCTGCTGTGGAAATTACGAACCAAAAAGTTTCAGTT
ACGCGGGACCAAACATCAGTTACGCGGGACCAAACATCAGTTACGCGCAA
CAATCAGCAAACTTCGGACTACAGTAATTCAATGTCATCAGATGGTGGTT
CAGATTACAATTTCAACGATCAGTTGGTTGTTTTGGTTCAACATCAAGGT
TCTGATGATGAATTGGTCATTGATGTTGATGCGCACAACTCAAAATCTTC
TGGAGCAGATGACGTGGATGGTTACCAAGACAATCTTCACGGGGATGAAG
AAGAAGATCTGCTGGATATCCCTTTCGCTCGCAACGGGAGCATCACTACA
ATAGGGGTGGTGTCTGAAGGGAGCATGGCTTTCAATAGCGCATCCGTCGA
CCCGAGTGTCTCGAGTCTGATGAATAGCAGTTCAGTTGAAGAGAATGATA
AATCGATCTTCTGGAGCAGATGACGTGGATGGTTACCAAGACAATCTTCA
CGGGGATGAAGAAGAAGATCTGCTGGATATCCCTTTCGCTCGCAACGGGA
GCATCACTACAATAGGGGTGGTGTCTGAAGGGAGCATGGCTTTCAATAGC
GCATCCGTCGACCCGAGTGTCTCGAGTCTGATGAATAGCAGTTCAGTTGA
AGAGAATGATAAATCGCAACCACCGTCTTCAAGGCGTAGTCCTTCAAACT
CGTCCAAAAAGAACTCAAAGCCACCAGGACCCACCAAAACTGACTACAGT
CCAAGACTTCCCCTATCTTCACCCTCCGATCTTACGGCGCCCATGCCACC
CCCGTCACATTACTATGGTAACCAACATGGGAGTCACAGCCCTGTACCAG
CTGATAACTACAGCAACCACCGTCTTCAAGGCGTAGTCCTTCAAACTCGT
CCAAAAAGAACTCAAAGCCACCAGGACCCACCAAAACTGACTACAGTCCA
AGACTTCCCCTATCTTCACCCTCCGATCTTACGGCGCCCATGCCACCCCC
GTCACATTACTATGGTAACCAACATGGGAGTCACAGCCCTGTACCAGCTG
ATAACTACAGAAGCCAATATGGAGGTCCATCGCCACAACATCAAGATATC
AATGCAGAGGTTTTAGTCCTTGATGATGATGGAGGAGGTGAAAATATTAC
CATGGCACGACCAAAAACATCTAAGCCAATATGGAGGTCCATCGCCACAA
CATCAAGATATCAATGCAGAGGTTTTAGTCCTTGATGATGATGGAGGAGG
TGAAAATATTACCATGGCACGACCAAAAACATCTAAGGGACGACGTAATC
AAACCGACCAACGCTCATTGACTCGTGATTCATGGCCGCCCCCTAAATCA
ACGCCACAAAGCCGCCCTCAAGATGATGAAGCGCCAAAGCAGCAAAAAAC
ATCACCACGAATCTCATCCAATGTTCGTTTGGCGCCTTTATCCGTGTCCT
CACTTCCTAAACCTCCTTCGTATCGTTACGATTCATGAAAGGGACGACGT
AATCAAACCGACCAACGCTCATTGACTCGTGATTCATGGCCGCCCCCTAA
ATCAACGCCACAAAGCCGCCCTCAAGATGATGAAGCGCCAAAGCAGCAAA
AAACATCACCACGAATCTCATCCAATGTTCGTTTGGCGCCTTTATCCGTG
TCCTCACTTCCTAAACCTCCTTCGTATCGTTACGATTCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:1330762..1336334 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1318-1521:205 |
| Aaloc | 1207-1317:1351 |
| Aaloc | 1009-1203:3236 |
| Aaloc | 799-1008:3917 |
| Aaloc | 439-795:4673 |
| Aaloc | 1-435:5574 |
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