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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000239_pilon:421460..423160- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044717 ID=XLOC_044717|Name=XLOC_044717|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1701bp|location=Sequence derived from alignment at sc0000239_pilon:421460..423160- (Clytia hemisphaerica_ch_hm2_pilon)
TCGGTCAAGAAAACAAATATGGCGGTCGAAATTAGCAGTACGACAGTTGG
AAAAGGAGCAAATAAACACTGTTGCTGGGGAATTTGCAAACATGATTCAA
GATATCCTGATAGATTACCACCAGGGACATTTTTTATATCATTTCCAAAA
GTTGGTAAATTGAAAGATTCACAAACAGAGTGGCAAAAGGGTAAAGAAAG
GGAAAAAACAGAGAAAGCTAAGAGATGGATTCATGCTTGTGGAAGGAAGG
GTTTCACCATTTCAAACATCACTAAAAGCACATACATTTGCTCTAAACAT
TTCATTGGTGGAAATGGTCCAACCGAGGAAAATCCAGATCCAATAAAAGC
AACACTATCAGAAGCTGAAGTGGAAAAGAAGTTAAGTGGTAAGAGGAAGG
CACCAAAACAACGAGAACCTCTCCCTTCGAAGCCAGTGGCAGTGAAAAGG
AAGAAAGAATCAAATATCGAAGTAACATTCGAATGCAATACTGCCAATGA
ACCTCTTGATAGCACTGAAGCTGGTCCAAGTACATCATCTAATCAAAATG
AAGAAAATCAAAAACAAACTCTTATTAGTGTTGATACCTATTCTACTGAT
GTTGTCAACCCTCCTGATACTGTCGACAAATCCACCCAAACTGAGGCTGA
CAAACTAGCCAAATCCACCCAAACTGAGGCTGACAAACTAGCCATTTCAG
GAAGAATTGAAATTGTCACGTTAAAAAATGAGATTGCTGTGTTAAAGAGT
AGAATTGAATCATCAAACGATCACAGTGAGTGTAACCCAATGAGCATGAA
TGTCATACTGAAATCAGAAGAAAAGACAAAGTATTTTATTGGACTTTCTC
GAAAGCATTTTTGGAGCCTTTATAACTTTCTTGGTGATGCCAAATTCAAT
CTCACATACTGGAACAGTTCATATTCTCGAAACTCTTCAACAAGAAAATT
CTCGATCCCAATTCCTAACCAACTATTCATAACTCTTTTACGACTGCGAC
GAGGGTTTAACCTTTACACAATGGCACACTTTTACAGTGTTAGCGAAACC
ACAATCAGTACAATTTTCAACACATGGATTATGTTTTTGTTTCATCATTT
CAAAAGTTTGGGCAATGATATTCTGTTTCCTGAGAGACAAGTATTCAAAA
AGACACTGCCGAAAGTTTTTCGCCCATTCAAGAATGTAAGGGCAAGCATA
GACTGTACTGAGTTGAAATGTGAAGCACCTCGTGATTACAAGAGACAAGG
AAATATGTATTCAAACTACAAAAGTCACTGCACATTTAAATGTTTGATTG
CAGTCAATCCTAATGGGGCAGCATGTTTTGTATCTGACTTGTTTGAGGGG
AGCATTAATGATGTGGACATTTTTCAAAAATGTGGTATACTGCAGCAAGT
CAATTTCCAGGATTCTTTTTTAGTAGATAAAGGCTTCACTGTGCAACATT
TGCTGCTACCCAAACAAGCATCAATTTTCATCCCTCCCTTCTTGGGGAAA
CGTGAAAGATTTACAAAGGAGGAAGTATTGTTATGCAAAAGGATTGCAAA
AGCTCGAATCCATGTGGAAAGATTTAACGAACGATTAAAGAGATTTCGAC
TCTTGGATGGAATAATTCAATTATCTCTTACACCTATTGCTTCACAGTTA
GTTTTTGTGGGGTCAATGCTGGTCAATTTTCAGCATTTCCTATGTAAATG
A Coding sequence (CDS) from alignment at sc0000239_pilon:421460..423160- >XLOC_044717 ID=XLOC_044717|Name=XLOC_044717|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3402bp|location=Sequence derived from alignment at sc0000239_pilon:421460..423160- (Clytia hemisphaerica_ch_hm2_pilon)
TCGGTCAAGAAAACAAATATGGCGGTCGAAATTAGCAGTACGACAGTTGG
AAAAGGAGCAAATAAACACTGTTGCTGGGGAATTTGCAAACATGATTCAA
GATATCCTGATAGATTACCACCAGGGACATTTTTTATATCATTTCCAAAA
GTTGGTAAATTGAAAGATTCACAAACAGAGTGGCAAAAGGGTAAAGAAAG
GGAAAAAACAGAGAAAGCTAAGAGATGGATTCATGCTTGTGGAAGGAAGG
GTTTCACCATTTCAAACATCACTAAAAGCACATACATTTGCTCTAAACAT
TTCATTGGTGGAAATGGTCCAACCGAGGAAAATCCAGATCCAATAAAAGC
AACACTATCAGAAGCTGAAGTGGAAAAGAAGTTAAGTGGTAAGAGGAAGG
CACCAAAACAACGAGAACCTCTCCCTTCGAAGCCAGTGGCAGTGAAAAGG
AAGAAAGAATCAAATATCGAAGTAACATTCGAATGCAATACTGCCAATGA
ACCTCTTGATAGCACTGAAGCTGGTCCAAGTACATCATCTAATCAAAATG
AAGAAAATCAAAAACAAACTCTTATTAGTGTTGATACCTATTCTACTGAT
GTTGTCAACCCTCCTGATACTGTCGACAAATCCACCCAAACTGAGGCTGA
CAAACTAGCCAAATCCACCCAAACTGAGGCTGACAAACTAGCCATTTCAG
GAAGAATTGAAATTGTCACGTTAAAAAATGAGATTGCTGTGTTAAAGAGT
AGAATTGAATCATCAAACGATCACAGTGAGTGTAACCCAATGAGCATGAA
TGTCATACTGAAATCAGAAGAAAAGACAAAGTATTTTATTGGACTTTCTC
GAAAGCATTTTTGGAGCCTTTATAACTTTCTTGGTGATGCCAAATTCAAT
CTCACATACTGGAACAGTTCATATTCTCGAAACTCTTCAACAAGAAAATT
CTCGATCCCAATTCCTAACCAACTATTCATAACTCTTTTACGACTGCGAC
GAGGGTTTAACCTTTACACAATGGCACACTTTTACAGTGTTAGCGAAACC
ACAATCAGTACAATTTTCAACACATGGATTATGTTTTTGTTTCATCATTT
CAAAAGTTTGGGCAATGATATTCTGTTTCCTGAGAGACAAGTATTCAAAA
AGACACTGCCGAAAGTTTTTCGCCCATTCAAGAATGTAAGGGCAAGCATA
GACTGTACTGAGTTGAAATGTGAAGCACCTCGTGATTACAAGAGACAAGG
AAATATGTATTCAAACTACAAAAGTCACTGCACATTTAAATGTTTGATTG
CAGTCAATCCTAATGGGGCAGCATGTTTTGTATCTGACTTGTTTGAGGGG
AGCATTAATGATGTGGACATTTTTCAAAAATGTGGTATACTGCAGCAAGT
CAATTTCCAGGATTCTTTTTTAGTAGATAAAGGCTTCACTGTGCAACATT
TGCTGCTACCCAAACAAGCATCAATTTTCATCCCTCCCTTCTTGGGGAAA
CGTGAAAGATTTACAAAGGAGGAAGTATTGTTATGCAAAAGGATTGCAAA
AGCTCGAATCCATGTGGAAAGATTTAACGAACGATTAAAGAGATTTCGAC
TCTTGGATGGAATAATTCAATTATCTCTTACACCTATTGCTTCACAGTTA
GTTTTTGTGGGGTCAATGCTGGTCAATTTTCAGCATTTCCTATGTAAATG
ATCGGTCAAGAAAACAAATATGGCGGTCGAAATTAGCAGTACGACAGTTG
GAAAAGGAGCAAATAAACACTGTTGCTGGGGAATTTGCAAACATGATTCA
AGATATCCTGATAGATTACCACCAGGGACATTTTTTATATCATTTCCAAA
AGTTGGTAAATTGAAAGATTCACAAACAGAGTGGCAAAAGGGTAAAGAAA
GGGAAAAAACAGAGAAAGCTAAGAGATGGATTCATGCTTGTGGAAGGAAG
GGTTTCACCATTTCAAACATCACTAAAAGCACATACATTTGCTCTAAACA
TTTCATTGGTGGAAATGGTCCAACCGAGGAAAATCCAGATCCAATAAAAG
CAACACTATCAGAAGCTGAAGTGGAAAAGAAGTTAAGTGGTAAGAGGAAG
GCACCAAAACAACGAGAACCTCTCCCTTCGAAGCCAGTGGCAGTGAAAAG
GAAGAAAGAATCAAATATCGAAGTAACATTCGAATGCAATACTGCCAATG
AACCTCTTGATAGCACTGAAGCTGGTCCAAGTACATCATCTAATCAAAAT
GAAGAAAATCAAAAACAAACTCTTATTAGTGTTGATACCTATTCTACTGA
TGTTGTCAACCCTCCTGATACTGTCGACAAATCCACCCAAACTGAGGCTG
ACAAACTAGCCAAATCCACCCAAACTGAGGCTGACAAACTAGCCATTTCA
GGAAGAATTGAAATTGTCACGTTAAAAAATGAGATTGCTGTGTTAAAGAG
TAGAATTGAATCATCAAACGATCACAGTGAGTGTAACCCAATGAGCATGA
ATGTCATACTGAAATCAGAAGAAAAGACAAAGTATTTTATTGGACTTTCT
CGAAAGCATTTTTGGAGCCTTTATAACTTTCTTGGTGATGCCAAATTCAA
TCTCACATACTGGAACAGTTCATATTCTCGAAACTCTTCAACAAGAAAAT
TCTCGATCCCAATTCCTAACCAACTATTCATAACTCTTTTACGACTGCGA
CGAGGGTTTAACCTTTACACAATGGCACACTTTTACAGTGTTAGCGAAAC
CACAATCAGTACAATTTTCAACACATGGATTATGTTTTTGTTTCATCATT
TCAAAAGTTTGGGCAATGATATTCTGTTTCCTGAGAGACAAGTATTCAAA
AAGACACTGCCGAAAGTTTTTCGCCCATTCAAGAATGTAAGGGCAAGCAT
AGACTGTACTGAGTTGAAATGTGAAGCACCTCGTGATTACAAGAGACAAG
GAAATATGTATTCAAACTACAAAAGTCACTGCACATTTAAATGTTTGATT
GCAGTCAATCCTAATGGGGCAGCATGTTTTGTATCTGACTTGTTTGAGGG
GAGCATTAATGATGTGGACATTTTTCAAAAATGTGGTATACTGCAGCAAG
TCAATTTCCAGGATTCTTTTTTAGTAGATAAAGGCTTCACTGTGCAACAT
TTGCTGCTACCCAAACAAGCATCAATTTTCATCCCTCCCTTCTTGGGGAA
ACGTGAAAGATTTACAAAGGAGGAAGTATTGTTATGCAAAAGGATTGCAA
AAGCTCGAATCCATGTGGAAAGATTTAACGAACGATTAAAGAGATTTCGA
CTCTTGGATGGAATAATTCAATTATCTCTTACACCTATTGCTTCACAGTT
AGTTTTTGTGGGGTCAATGCTGGTCAATTTTCAGCATTTCCTATGTAAAT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000239_pilon | genome | sc0000239_pilon:421460..423160 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1701:1702 |
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