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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:536604..538815+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044695 ID=XLOC_044695|Name=XLOC_044695|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2212bp|location=Sequence derived from alignment at sc0000044_pilon:536604..538815+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAGGAATGAAGCTAAAATCCATAGTTCACATACaaaaaaaTGTGGACAG
TCGTTTCTATCAGTATACAGAGTGGTGGCAAAACCATTATTTCGTTGAAA
TTGATATTGAAATTCCATTGGATGAACAGGAGAATAAAGCTTTCCCATTG
GTCGGTAACAAAAACAACGTGCTCCGATTGGCTCAATATGTGCATGTGAC
ACCTTCTAATGATGCATGCTTCATGGCAGATTGGGAATGGCGGGAAAATG
TTGAAGTTGAGATTTTGACACCCATTAGGAATCAAATACAATGGTTAGAA
TATTTACTGGTAATGTTAGAAAATGTGGTCAAAAAGACACATGAAAATAA
GGTTgggatttcttttatttttacatcCTTTTTACTACATTTCCTTAATC
TAGGAAGAACGAGTCTTAActtacaatattttttaagctCTTCCATTGGT
CTTGCCAATTGAATAGACTTTTTAACCCCCGGGCGGCGTTGCATCATTCT
CGTACAGGATATCCAATACAAGTTGTTTGATTGACGGCGTAAACCGGCTG
AAATGTACCGAGTAACGGCTGAGTTTACCAGGAGCTAGAATTTGACGTCA
AGGTGAGAAAATCAATGTAATGACTTTCAGACATTTGTAGTAAATCCGTG
TCTGGAAACTTTAACCATGTATCCCACGATTTCAAGAGTTGATAgcacgt
ttttttattcatGGGTGTCCGTCAAAGTAGCGTTTGCCAGGACGCCTATA
ACCCTGTGTTTAAAATCGACCTTCTCTTACCCTGAGAGTAATTTGACCTT
TCACTTTCACAcgtacactgaagttgagctcagtgctttagcacgttaca
gtTTATGAACCTATTCTTAATTTAAACTTTCTAGATTACGTTAAACGTCA
TTGATTACAAAAGTGATGACGGATACGTCTTGTCGTTACTAAACAAATTT
GACGTCAAGTATAAATACATTCTTGCTGATGACGTCACTTTCAACAAAGT
CAAAGCGCTGAACATTGGATTATCTCACATTGGGAACAACAATAGCATTG
TGTTTGTAATGGACCTACATCTACAATTGCCGTTGAATATCTTTGACCGT
ATTCGAAAGGTGGGTTATCCTCCTACTTTTGAATGGGtcattccattaaa
tttccatacatggGGTGGACGAACCATTTGAAGTCGAAAAGGATTTCTTG
GAGATGCGTAGATACCCCCTggataataaaaatatatttgtgtaccttaa
agtgacggtggacgaactaaaatcagtcttttacccccttggaattttta
aggtaattttttaccccctggaaaaacgaaaaacacttttttagaccccc
tggaaatgttcgtccacccccccctgACTGGAATGGCCCAACACACCAAT
TTCTTTCAAAGAGTATACgcttaaaattgaaattcttaCGCAAACTTTTC
TACGCTCGCTATTTagtcttttaatttttgaacAATAACATTATTACTGC
GGATATAGCCAGAACACGAGAAATCGGTAaagttacttgtatatccagtg
caTGATTGTTCCTCAATTTTTTGGATTCAACCTATAAGTTCAGGTGTCAC
AGACCCGCCGCTGAAAATATGGCCAAAATTTCATCCTCGGTGGGGAAAAA
CCCTGCAATTTCAGCCCAACTGGgaatttgactttgaaattcaatgttaa
aaTAAATTGCACTCAAAAACTTGTGGGGACAAGAACAAAATACGTTCAAT
CCTAGCCGTGAGACAGGGCTGTTATAGGCAGTGTTTAAACTAGTCATGTG
ACTTTGTTTAGGATTAAAAACTGACTTAAACTTGACCTAATTCTAAAAAG
ATTGAGAATTCTTCTACGGTTATACGTGGTCCATTCTTGTAAATCATAGA
CTAGTAACTATGTCGTTGTAATTCGCTGCAGCTTACGCTTTCAATGGGCT
CACTACGTTTGCTGAATACAACTCTTTCCCGCGGCAATtctatttttcat
aagaacacttTATAAGCACTATCTCCGCCTTTCTGTGACCAAGGAAAGGC
ATACGCTTGCTAGTCTATGTAAATTACTTCTCAAATTCTATTTAGTTTAC
CATCCAAGATAAGACAACATTTTGTCCAACATTGTTGAAATTCCAATGCG
GTGAACACGAACAGTACACAACATTGCACGAAACACTTTGGATAGATGCT
GGTATGGCATGA Coding sequence (CDS) from alignment at sc0000044_pilon:536604..538815+ >XLOC_044695 ID=XLOC_044695|Name=XLOC_044695|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1386bp|location=Sequence derived from alignment at sc0000044_pilon:536604..538815+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAGGAATGAAGCTAAAATCCATAGTTCACATACaaaaaaaTGTGGACAG
TCGTTTCTATCAGTATACAGAGTGGTGGCAAAACCATTATTTCGTTGAAA
TTGATATTGAAATTCCATTGGATGAACAGGAGAATAAAGCTTTCCCATTG
GTCGGTAACAAAAACAACGTGCTCCGATTGGCTCAATATGTGCATGTGAC
ACCTTCTAATGATGCATGCTTCATGGCAGATTGGGAATGGCGGGAAAATG
TTGAAGTTGAGATTTTGACACCCATTAGGAATCAAATACAATGGTTAGAA
TATTTACTGGTAATGTTAGAAAATGTGGTCAAAAAGACACATGAAAATAA
GCAAGGAATGAAGCTAAAATCCATAGTTCACATACaaaaaaaTGTGGACA
GTCGTTTCTATCAGTATACAGAGTGGTGGCAAAACCATTATTTCGTTGAA
ATTGATATTGAAATTCCATTGGATGAACAGGAGAATAAAGCTTTCCCATT
GGTCGGTAACAAAAACAACGTGCTCCGATTGGCTCAATATGTGCATGTGA
CACCTTCTAATGATGCATGCTTCATGGCAGATTGGGAATGGCGGGAAAAT
GTTGAAGTTGAGATTTTGACACCCATTAGGAATCAAATACAATGGTTAGA
ATATTTACTGGTAATGTTAGAAAATGTGGTCAAAAAGACACATGAAAATA
AGATTACGTTAAACGTCATTGATTACAAAAGTGATGACGGATACGTCTTG
TCGTTACTAAACAAATTTGACGTCAAGTATAAATACATTCTTGCTGATGA
CGTCACTTTCAACAAAGTCAAAGCGCTGAACATTGGATTATCTCACATTG
GGAACAACAATAGCATTGTGTTTGTAATGGACCTACATCTACAATTGCCG
TTGAATATCTTTGACCGTATTCGAAAGATTACGTTAAACGTCATTGATTA
CAAAAGTGATGACGGATACGTCTTGTCGTTACTAAACAAATTTGACGTCA
AGTATAAATACATTCTTGCTGATGACGTCACTTTCAACAAAGTCAAAGCG
CTGAACATTGGATTATCTCACATTGGGAACAACAATAGCATTGTGTTTGT
AATGGACCTACATCTACAATTGCCGTTGAATATCTTTGACCGTATTCGAA
AGTTTACCATCCAAGATAAGACAACATTTTGTCCAACATTGTTGAAATTC
CAATGCGGTGAACACGAACAGTACACAACATTGCACGAAACACTTTGGAT
AGATGCTGGTATGGCATGATTTACCATCCAAGATAAGACAACATTTTGTC
CAACATTGTTGAAATTCCAATGCGGTGAACACGAACAGTACACAACATTG
CACGAAACACTTTGGATAGATGCTGGTATGGCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:536604..538815 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 577-693:2096 |
| Aaloc | 352-576:885 |
| Aaloc | 1-351:1 |
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