XLOC_044667 (mRNA) -

Overview
NameXLOC_044667
Unique NameXLOC_044667
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000071_pilon:895743..897125+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044667 ID=XLOC_044667|Name=XLOC_044667|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1383bp|location=Sequence derived from alignment at sc0000071_pilon:895743..897125+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGGAAATCGAAAGAAACACTTTTCACCAGAAGGGGAAAAGCAGTCG CACCCTTGGTAGTATGGTCAGATTCCCTAACTTGATGAATCGATCGATCT TTCGAACCAAGGGGCTTTCCCCTGATGTTGGAAAAGTGAATCATAAAACA GTCGATGATTCCATTGAagagaaaactttaaaaattgatgaagTGAATGG AAAAGAATTTGTTTCGGGGAATATTTCTTCCTTACAATCGCACAGCGTGG ATTGTGAAGAAAAACTGACTTTGAAAACTGGATTGCTCTTGGATCAAGAG AGGGAGGGAAAATGTTCAGGGAACGATAAAATGGAACTTAAAGGTTGCAT CGATGAAGATTTGGAAGGAAAAACAGTCGACGAACTTCAAGAACAAATTA GAAATATGAAACGAACTTATTTATTTGAACAGAATCATTTAATGGAAGGA TGCGAGTTGGAAAAGTTCGAGTTACGCGAAAGTTATGAGGAAGAGAAAAC TCGACTGAAGAAAGCGTTTGAGAATGAGAAAACTGAATTGTTGAAAGAGA TTGAAAGGAAAGATAAGATGTTGGAAAAGCTAGCTGACGTTTTGAAAGAA CAACATCAGAAAGATCTTGAGATGTATAAAACGAAAATCGAGGAAGAATT CAATACTAAATACATTTTATGTGAGAAATTCAACAAAACTCTACAAACTG CGATCGAGAATGTTCAACGCATTATACAAAACAATGAACAAACGTTTGGG AATTTACACGAATTTAAAACACTTAAAGAATGTAAAACGCAAATGAATGA TCTCATGCCTAAGAAGGATTCAGAGGCGTTTAATGCTCAAAACGAGACAG TCGGAGGAGGACTTATTCGTTCCATTTCTGATCCAACGCAACAGAGGCGT AGTGACGAAAATGCAGCTGTAAAATGTAAATTGAGCGTAACGAAAGCGCA TAGTTTTGAATACGAGAGTCGCTCTGATGACGATATACAGCACGAAATGG CGGAAGTGTACCGAAAACAGAAAACGGAACTCGTTAAATTATTTACTGCA GAAAAAGATGAAGATCGTCAACGTTTGAGGGATGAGAAAGAGCGTTTCGA ACGTGAAGTGCGAACAGAATATGATTCGCGTATGATCGTTGAGCGGAACG CTTGGCGTGATACTATCGAAGATCTTGAACGCGAGatcaacattttgaaa ttcgaacgagAGCAGTTGGATCGGAACTATTGTTTGGGAATGGATGAAAT GAGAACGGAATTTGAAGTCGAAAAACAACAAATATACAGACGTTTCAGTG AGACACAAACTATGTATCAGAATAAATTACGAGATTTTCGTAAAGATTTT ACGAAAGAGAAGAAAGTTTGCGTCTCTGACTAG

Coding sequence (CDS) from alignment at sc0000071_pilon:895743..897125+

>XLOC_044667 ID=XLOC_044667|Name=XLOC_044667|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2766bp|location=Sequence derived from alignment at sc0000071_pilon:895743..897125+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGGAAATCGAAAGAAACACTTTTCACCAGAAGGGGAAAAGCAGTCG
CACCCTTGGTAGTATGGTCAGATTCCCTAACTTGATGAATCGATCGATCT
TTCGAACCAAGGGGCTTTCCCCTGATGTTGGAAAAGTGAATCATAAAACA
GTCGATGATTCCATTGAagagaaaactttaaaaattgatgaagTGAATGG
AAAAGAATTTGTTTCGGGGAATATTTCTTCCTTACAATCGCACAGCGTGG
ATTGTGAAGAAAAACTGACTTTGAAAACTGGATTGCTCTTGGATCAAGAG
AGGGAGGGAAAATGTTCAGGGAACGATAAAATGGAACTTAAAGGTTGCAT
CGATGAAGATTTGGAAGGAAAAACAGTCGACGAACTTCAAGAACAAATTA
GAAATATGAAACGAACTTATTTATTTGAACAGAATCATTTAATGGAAGGA
TGCGAGTTGGAAAAGTTCGAGTTACGCGAAAGTTATGAGGAAGAGAAAAC
TCGACTGAAGAAAGCGTTTGAGAATGAGAAAACTGAATTGTTGAAAGAGA
TTGAAAGGAAAGATAAGATGTTGGAAAAGCTAGCTGACGTTTTGAAAGAA
CAACATCAGAAAGATCTTGAGATGTATAAAACGAAAATCGAGGAAGAATT
CAATACTAAATACATTTTATGTGAGAAATTCAACAAAACTCTACAAACTG
CGATCGAGAATGTTCAACGCATTATACAAAACAATGAACAAACGTTTGGG
AATTTACACGAATTTAAAACACTTAAAGAATGTAAAACGCAAATGAATGA
TCTCATGCCTAAGAAGGATTCAGAGGCGTTTAATGCTCAAAACGAGACAG
TCGGAGGAGGACTTATTCGTTCCATTTCTGATCCAACGCAACAGAGGCGT
AGTGACGAAAATGCAGCTGTAAAATGTAAATTGAGCGTAACGAAAGCGCA
TAGTTTTGAATACGAGAGTCGCTCTGATGACGATATACAGCACGAAATGG
CGGAAGTGTACCGAAAACAGAAAACGGAACTCGTTAAATTATTTACTGCA
GAAAAAGATGAAGATCGTCAACGTTTGAGGGATGAGAAAGAGCGTTTCGA
ACGTGAAGTGCGAACAGAATATGATTCGCGTATGATCGTTGAGCGGAACG
CTTGGCGTGATACTATCGAAGATCTTGAACGCGAGatcaacattttgaaa
ttcgaacgagAGCAGTTGGATCGGAACTATTGTTTGGGAATGGATGAAAT
GAGAACGGAATTTGAAGTCGAAAAACAACAAATATACAGACGTTTCAGTG
AGACACAAACTATGTATCAGAATAAATTACGAGATTTTCGTAAAGATTTT
ACGAAAGAGAAGAAAGTTTGCGTCTCTGACTAGATGAGGGAAATCGAAAG
AAACACTTTTCACCAGAAGGGGAAAAGCAGTCGCACCCTTGGTAGTATGG
TCAGATTCCCTAACTTGATGAATCGATCGATCTTTCGAACCAAGGGGCTT
TCCCCTGATGTTGGAAAAGTGAATCATAAAACAGTCGATGATTCCATTGA
agagaaaactttaaaaattgatgaagTGAATGGAAAAGAATTTGTTTCGG
GGAATATTTCTTCCTTACAATCGCACAGCGTGGATTGTGAAGAAAAACTG
ACTTTGAAAACTGGATTGCTCTTGGATCAAGAGAGGGAGGGAAAATGTTC
AGGGAACGATAAAATGGAACTTAAAGGTTGCATCGATGAAGATTTGGAAG
GAAAAACAGTCGACGAACTTCAAGAACAAATTAGAAATATGAAACGAACT
TATTTATTTGAACAGAATCATTTAATGGAAGGATGCGAGTTGGAAAAGTT
CGAGTTACGCGAAAGTTATGAGGAAGAGAAAACTCGACTGAAGAAAGCGT
TTGAGAATGAGAAAACTGAATTGTTGAAAGAGATTGAAAGGAAAGATAAG
ATGTTGGAAAAGCTAGCTGACGTTTTGAAAGAACAACATCAGAAAGATCT
TGAGATGTATAAAACGAAAATCGAGGAAGAATTCAATACTAAATACATTT
TATGTGAGAAATTCAACAAAACTCTACAAACTGCGATCGAGAATGTTCAA
CGCATTATACAAAACAATGAACAAACGTTTGGGAATTTACACGAATTTAA
AACACTTAAAGAATGTAAAACGCAAATGAATGATCTCATGCCTAAGAAGG
ATTCAGAGGCGTTTAATGCTCAAAACGAGACAGTCGGAGGAGGACTTATT
CGTTCCATTTCTGATCCAACGCAACAGAGGCGTAGTGACGAAAATGCAGC
TGTAAAATGTAAATTGAGCGTAACGAAAGCGCATAGTTTTGAATACGAGA
GTCGCTCTGATGACGATATACAGCACGAAATGGCGGAAGTGTACCGAAAA
CAGAAAACGGAACTCGTTAAATTATTTACTGCAGAAAAAGATGAAGATCG
TCAACGTTTGAGGGATGAGAAAGAGCGTTTCGAACGTGAAGTGCGAACAG
AATATGATTCGCGTATGATCGTTGAGCGGAACGCTTGGCGTGATACTATC
GAAGATCTTGAACGCGAGatcaacattttgaaattcgaacgagAGCAGTT
GGATCGGAACTATTGTTTGGGAATGGATGAAATGAGAACGGAATTTGAAG
TCGAAAAACAACAAATATACAGACGTTTCAGTGAGACACAAACTATGTAT
CAGAATAAATTACGAGATTTTCGTAAAGATTTTACGAAAGAGAAGAAAGT
TTGCGTCTCTGACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_044667XLOC_044667-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000071_pilongenomesc0000071_pilon:895743..897125 +
Properties
Property NameValue
Aaloc1-1383:1