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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:1618601..1621847- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044662 ID=XLOC_044662|Name=XLOC_044662|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3247bp|location=Sequence derived from alignment at sc0000031_pilon:1618601..1621847- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACATCTACTTTTGGAAACCAAAGAGGTACTTAACTTGAGACTCGT
TCAATTTGCATTTCATATAATTTTTACTTTATTTCCTTTTCGAATTTTGT
CTGGGAATCAATTAAATGCATTGTATTTCCTGCTGGCAAAACAATCGGCT
TGCAATTCGAGGGTTGTGGGTTCGATCCCCGGTCGCCGCCAACTCAGCGA
ATGAGTAGATTAGAATGGGTAATCTGATCTAAGCGGGTAAGTAACTGGGA
GCTGAGAGTAGATGTGGTGCTCCACCTCAGCATTCGATCTCCCTGGTCTA
GCGCAAATAGAAAAGCGGATATGTAGACTCCCTCACTCCCGGCTCCGCCG
ACAGCCATCAGATGAGTAGACTTACTTACTTACAAAAGAATGAAATGAAA
AGACAGTAATCTTGAATATTATTTTTGCTTTTATTATTACAGCATGAAGC
GACGGTTGAAACATCGGAAGTGATCTTAAGAAGGTGACAACCATTACTCG
TGGAGGCAAAGCCTGCACCCTCATCAATTTAAGCTATTTTGAAGCTGACT
CCACTTTTCGTAGATTAAACGAAATCTTCACTTTGTTGGCAAACCCTGGC
CTTGACAAATGGTTTCGTAACGCCATAACAGGATGTCTCAGAACACAAAT
GGCTTTTATTGTAGACAATGGTCCTGGTGAAGCTCCGAGTAGCCCGTTGG
TCAAAATGCTTCTTGCGAGATTATTGAATTACCTTAATCTGGACGTAATT
TCACAGATGTCGTTTGCAGAGTATAATTCAAAATTAAACTATGTTGAGCG
TGTGCATGCCGTAGAAAATGATTGTATAAGTCGTCATGGACCCTTCAGTT
CAAAATTGAAGCATGCTGAATGTGAAATTGGAGACATAAAACATAGGGAA
AATATGGAGGAGATGTGCAAGCAGGTCATCGATTGCATCGGACAAGGGGG
ATATTCAGGCCATCCATTGACTTGTGTTCGTGGCGTTCGAGATGAAGAAT
TTGTATTCAACGATGAAGAACGTTTGCGACAATTCCTAATGTTATCGGAA
GAAGGGAAAGAGCTTTGCGACTGGACCTACAAGCCTGAAGAATGTCCATT
AGCCACCCACATGAAAATTCTGTGGAAAGCCAATGATTGTGAAAGGAGGT
AATCTTTTTAGCATTGAAGGATTGAACATTAAAAAAGAAATTAATTGTGC
TTGGAACTTTTACTCAATGGAGCGTCTGTATATCAGTGTACCTTTGTCTC
GACTACCTGGTCTGGAATCATTCATTTTCTTATACTTAGAAGTGTCTGAG
GTCTTAATCGAGGGTGTTAAGATGTATCATCAATTTATTTGAATAATCAC
TCAAATCAATAATCACCACTTCACTCAATCTAGATACATTGACGATTACA
ATTTACTGACAAAGCTGAATACACCGAACACCAATTGGAGTGACCAATAC
AGTTGCATCCTTTATAGGTATTTTATATTATATTGGCTTTATACCGGGTG
TTTCAAAACCCGTTCCGCAAATTTTCGTCGACTTCGGGCTTAGTTCTTTT
TTGTTTTAGCCTATAGCCTAGTCTACAAAAACCTTGGCATCATTTCTACT
AACAGATTAAATTGATAAATTTTTAATGACTTAATTCACACAATTTTACT
TGTGTACTAATAATTATATTTATCAGGGAAAATGACATGGAACAGAATCA
AGCAATCTCACGACATCCTCCACAGCCAATACCCGATTTTGTGCGGTGGG
TGGAGACAGAAGAGCTTCACTACTTGTCTATCTCAAAAGCACAAGAAATT
AATGAAATAATTCCTGTTCTGACGCAAACGCCGGAGCTGTTTCTACCATC
CAGGATTTTGGACGCTGTCCTTCGAATAATGTTAGAAGTGAGTGCACTAA
TTAACCGATTAGTATTTGTTAACACACGATAAAGAGCGAGCGTGCTTTGA
AAATATTTTTTTGTTTTTAATTTATCCGGGTCTGAAAGAACGTGGAAAAT
TCGACGTAATCAAGTAATCGTGACTCCATTTTTTTAATTCCATTAATTAT
CATTAAAATAATATATGCATTTTAACTCGAAGTTAGTTGGGTTACGCTCA
CAAAACAAAAGACATATTACCATTTACTTGTCATATAAAATACACGAGGC
AAATAATGAAATTAGTCAACTGTGCTCATTTTCTTACAGACTACAAAATT
TAATCAGATAATGCTACCATCGTTGTTGAAACTGTGTTTTGTTTACTATC
GGAATATTTTAATTAAAATAGGTACCTCATTATTTTTAAGGTCCCAAGTG
AAGTTTTGGTATCGCTAGCTCTTCTCGAATGGGTGCCTTTAGACGATCTC
AAGGAATTCATTGCAGAGAAGAAATCAAAACAAGAGAAATTGATCAATGA
AGGGTTGGAATTGGAGAGAGTCCGTAGACATCCACTGTATAAAGTTAAGA
AAGTACAGCTAGTCGAAAAATGTAAAGCGGAAAAGATCAAACATCAATTC
AAAAAGAAGCATGAGTTGGTGAAAGCATTGATGAAGGAGGAAGCGCCCCC
ATATCAGCCAATTAAACTCGAAGGTCTGCCGTCGACTTTGTATCAAATTA
CAACTAAAGTACCAGTGTCCGATTTGAGGTTCATCCTTCATCAGAATGGT
CTATCAACAATCGGTACCAAAGATGAACTCGCACTCCGCTGCTACCTCAA
GAAGAACAATAAAGATGACTTTATATCCAAGGATGAGGTTTCAAGCGTAA
TGAAGGTGATCAAAATCGCGAAAGAAGTTATTTTGGAACAAAAACGAATG
TCAATCCTTGGTTTCCAAGATGAAATTACTAAAAGAAAAAACTCATCGGA
AGTCACTCGTTCGAAAATCCAAAGACCCGAAGATACCAATTTCGAGACCT
TGGCTGATATATTTTCCCCACTGGAAACTTTTATAAAATCGTCTACGGAT
CCTAAAACAAGAGACATCGGGGATGCTGACGCCATTATGGATGATATTGA
AGATGGAGAAACTGGACAATTGGACAACTACGAGTGTTTTTTCCAAATTG
GGGCCAAAGTCAAGGTGTTTTGGAAGAAAGAAGACGTACAAGTGCTTGGA
TGGCGAGGTGGTTGGTATGTGGCCTACGTAACGGATTTTTGTAGGGAAGA
GGATCAGATATCTGTCCAGCACGTGAGTGAGCGTGACTCAATTTATGACT
TGGAAGTAACATCCTCGTTGTCGGATAACCAACTTAAGCTAGCTTAA Coding sequence (CDS) from alignment at sc0000031_pilon:1618601..1621847- >XLOC_044662 ID=XLOC_044662|Name=XLOC_044662|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3976bp|location=Sequence derived from alignment at sc0000031_pilon:1618601..1621847- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACATCTACTTTTGGAAACCAAAGAGATGACACATCTACTTTTGGA
AACCAAAGAGCATGAAGCGACGGTTGAAACATCGGAAGTGATCTTAAGAA
GGTGACAACCATTACTCGTGGAGGCAAAGCCTGCACCCTCATCAATTTAA
GCTATTTTGAAGCTGACTCCACTTTTCGTAGATTAAACGAAATCTTCACT
TTGTTGGCAAACCCTGGCCTTGACAAATGGTTTCGTAACGCCATAACAGG
ATGTCTCAGAACACAAATGGCTTTTATTGTAGACAATGGTCCTGGTGAAG
CTCCGAGTAGCCCGTTGGTCAAAATGCTTCTTGCGAGATTATTGAATTAC
CTTAATCTGGACGTAATTTCACAGATGTCGTTTGCAGAGTATAATTCAAA
ATTAAACTATGTTGAGCGTGTGCATGCCGTAGAAAATGATTGTATAAGTC
GTCATGGACCCTTCAGTTCAAAATTGAAGCATGCTGAATGTGAAATTGGA
GACATAAAACATAGGGAAAATATGGAGGAGATGTGCAAGCAGGTCATCGA
TTGCATCGGACAAGGGGGATATTCAGGCCATCCATTGACTTGTGTTCGTG
GCGTTCGAGATGAAGAATTTGTATTCAACGATGAAGAACGTTTGCGACAA
TTCCTAATGTTATCGGAAGAAGGGAAAGAGCTTTGCGACTGGACCTACAA
GCCTGAAGAATGTCCATTAGCCACCCACATGAAAATTCTGTGGAAAGCCA
ATGATTGTGAAAGGAGCATGAAGCGACGGTTGAAACATCGGAAGTGATCT
TAAGAAGGTGACAACCATTACTCGTGGAGGCAAAGCCTGCACCCTCATCA
ATTTAAGCTATTTTGAAGCTGACTCCACTTTTCGTAGATTAAACGAAATC
TTCACTTTGTTGGCAAACCCTGGCCTTGACAAATGGTTTCGTAACGCCAT
AACAGGATGTCTCAGAACACAAATGGCTTTTATTGTAGACAATGGTCCTG
GTGAAGCTCCGAGTAGCCCGTTGGTCAAAATGCTTCTTGCGAGATTATTG
AATTACCTTAATCTGGACGTAATTTCACAGATGTCGTTTGCAGAGTATAA
TTCAAAATTAAACTATGTTGAGCGTGTGCATGCCGTAGAAAATGATTGTA
TAAGTCGTCATGGACCCTTCAGTTCAAAATTGAAGCATGCTGAATGTGAA
ATTGGAGACATAAAACATAGGGAAAATATGGAGGAGATGTGCAAGCAGGT
CATCGATTGCATCGGACAAGGGGGATATTCAGGCCATCCATTGACTTGTG
TTCGTGGCGTTCGAGATGAAGAATTTGTATTCAACGATGAAGAACGTTTG
CGACAATTCCTAATGTTATCGGAAGAAGGGAAAGAGCTTTGCGACTGGAC
CTACAAGCCTGAAGAATGTCCATTAGCCACCCACATGAAAATTCTGTGGA
AAGCCAATGATTGTGAAAGGAGATACATTGACGATTACAATTTACTGACA
AAGCTGAATACACCGAACACCAATTGGAGTGACCAATACAGTTGCATCCT
TTATAGATACATTGACGATTACAATTTACTGACAAAGCTGAATACACCGA
ACACCAATTGGAGTGACCAATACAGTTGCATCCTTTATAGGGAAAATGAC
ATGGAACAGAATCAAGCAATCTCACGACATCCTCCACAGCCAATACCCGA
TTTTGTGCGGTGGGTGGAGACAGAAGAGCTTCACTACTTGTCTATCTCAA
AAGCACAAGAAATTAATGAAATAATTCCTGTTCTGACGCAAACGCCGGAG
CTGTTTCTACCATCCAGGATTTTGGACGCTGTCCTTCGAATAATGTTAGA
AGGAAAATGACATGGAACAGAATCAAGCAATCTCACGACATCCTCCACAG
CCAATACCCGATTTTGTGCGGTGGGTGGAGACAGAAGAGCTTCACTACTT
GTCTATCTCAAAAGCACAAGAAATTAATGAAATAATTCCTGTTCTGACGC
AAACGCCGGAGCTGTTTCTACCATCCAGGATTTTGGACGCTGTCCTTCGA
ATAATGTTAGAAGTCCCAAGTGAAGTTTTGGTATCGCTAGCTCTTCTCGA
ATGGGTGCCTTTAGACGATCTCAAGGAATTCATTGCAGAGAAGAAATCAA
AACAAGAGAAATTGATCAATGAAGGGTTGGAATTGGAGAGAGTCCGTAGA
CATCCACTGTATAAAGTTAAGAAAGTACAGCTAGTCGAAAAATGTAAAGC
GGAAAAGATCAAACATCAATTCAAAAAGAAGCATGAGTTGGTGAAAGCAT
TGATGAAGGAGGAAGCGCCCCCATATCAGCCAATTAAACTCGAAGGTCTG
CCGTCGACTTTGTATCAAATTACAACTAAAGTACCAGTGTCCGATTTGAG
GTTCATCCTTCATCAGAATGGTCTATCAACAATCGGTACCAAAGATGAAC
TCGCACTCCGCTGCTACCTCAAGAAGAACAATAAAGATGACTTTATATCC
AAGGATGAGGTTTCAAGCGTAATGAAGGTGATCAAAATCGCGAAAGAAGT
TATTTTGGAACAAAAACGAATGTCAATCCTTGGTTTCCAAGATGAAATTA
CTAAAAGAAAAAACTCATCGGAAGTCACTCGTTCGAAAATCCAAAGACCC
GAAGATACCAATTTCGAGACCTTGGCTGATATATTTTCCCCACTGGAAAC
TTTTATAAAATCGTCTACGGATCCTAAAACAAGAGACATCGGGGATGCTG
ACGCCATTATGGATGATATTGAAGATGGAGAAACTGGACAATTGGACAAC
TACGAGTGTTTTTTCCAAATTGGGGCCAAAGTCAAGGTGTTTTGGAAGAA
AGAAGACGTACAAGTGCTTGGATGGCGAGGTGGTTGGTATGTGGCCTACG
TAACGGATTTTTGTAGGGAAGAGGATCAGATATCTGTCCAGCACGTGAGT
GAGCGTGACTCAATTTATGACTTGGAAGTAACATCCTCGTTGTCGGATAA
CCAACTTAAGCTAGCTTAAGTCCCAAGTGAAGTTTTGGTATCGCTAGCTC
TTCTCGAATGGGTGCCTTTAGACGATCTCAAGGAATTCATTGCAGAGAAG
AAATCAAAACAAGAGAAATTGATCAATGAAGGGTTGGAATTGGAGAGAGT
CCGTAGACATCCACTGTATAAAGTTAAGAAAGTACAGCTAGTCGAAAAAT
GTAAAGCGGAAAAGATCAAACATCAATTCAAAAAGAAGCATGAGTTGGTG
AAAGCATTGATGAAGGAGGAAGCGCCCCCATATCAGCCAATTAAACTCGA
AGGTCTGCCGTCGACTTTGTATCAAATTACAACTAAAGTACCAGTGTCCG
ATTTGAGGTTCATCCTTCATCAGAATGGTCTATCAACAATCGGTACCAAA
GATGAACTCGCACTCCGCTGCTACCTCAAGAAGAACAATAAAGATGACTT
TATATCCAAGGATGAGGTTTCAAGCGTAATGAAGGTGATCAAAATCGCGA
AAGAAGTTATTTTGGAACAAAAACGAATGTCAATCCTTGGTTTCCAAGAT
GAAATTACTAAAAGAAAAAACTCATCGGAAGTCACTCGTTCGAAAATCCA
AAGACCCGAAGATACCAATTTCGAGACCTTGGCTGATATATTTTCCCCAC
TGGAAACTTTTATAAAATCGTCTACGGATCCTAAAACAAGAGACATCGGG
GATGCTGACGCCATTATGGATGATATTGAAGATGGAGAAACTGGACAATT
GGACAACTACGAGTGTTTTTTCCAAATTGGGGCCAAAGTCAAGGTGTTTT
GGAAGAAAGAAGACGTACAAGTGCTTGGATGGCGAGGTGGTTGGTATGTG
GCCTACGTAACGGATTTTTGTAGGGAAGAGGATCAGATATCTGTCCAGCA
CGTGAGTGAGCGTGACTCAATTTATGACTTGGAAGTAACATCCTCGTTGT
CGGATAACCAACTTAAGCTAGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:1618601..1621847 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1033-1989:958 |
| Aaloc | 823-1032:1571 |
| Aaloc | 739-819:1864 |
| Aaloc | 52-735:2786 |
| Aaloc | 31-48:2806 |
| Aaloc | 1-30:3248 |
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