|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000071_pilon:898911..904667- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044658 ID=XLOC_044658|Name=XLOC_044658|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5757bp|location=Sequence derived from alignment at sc0000071_pilon:898911..904667- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCACCTTGGTTTATCTTTCCTGCTTTTGACTTGTTTTTGGACACC
AACATTTTCGGACAATGCAGATAGTTTTGCACATGCGCAAGAGATGTTTG
AACAACGTCTTCGAATGCATAGTCGACATCACTGGAATAATTTATCGTTA
AAGAGAATCCATAAAGCAAGACGAAGGAACGCCACTTGTATGGGTAAGCG
AAATTTTTTGTCTTGTTGTGTGGAACTATTTTTTAGCTGTCATCTCTCCG
TTGTGGTTGAATAGCGCGTTTAAGTATCTACATTTTTCAGGATGATTGCT
AGTGACTGAAATGATTTGGTACAACCTGCAGGTTAACCCCATTCAATCAG
GATATCATAGTTCGGACCCCCCCCCCCTTTCTTAAGGGGGGATGACACCT
TCCAAAAAAGTGAAGAAGGGGGGGGTCAGAGATTTTCACTAAAAGAGGGG
GGATAGCAAGGAGGGGGATCGTTTAAGAAGGGGGGCTTACATATATTGTA
GATTATTTTCCAGCACTGTTATGAAATTTGGTCTAAATGAAAGGAAGTTC
TTTATTTTCTCTAAAAAGTGGTATTATATTTGCCAGACTTAATTTTTCTT
TACTGTTTCCCTTCCCTTTTTACCAAAAAAAAATTAGCCCGAAACCCTTG
GGGGATAGGCATTTTTAAAGGTTGGGGGGATGTCAAGAAGGGGGGGATCA
TTTAAGAAGGGGGGATCAGACCCCTTTCCGCACTATGGATATAAAATATA
AAAAGCTAACCGTCTCCATCGTAGAAGACACCGATACATAAACTCGATGA
TACCTATCAGTGCGGCTTTAAGAGGAGAGCAGTAGCTAGCTTCTTTTTCC
CTCTATTTTTACCGTTGTGTGTTGAATAACTTTAGAGAAGGCACAATATT
CCTGAAGCTGAAATACTTCTAGACCTAAAGTTTTTTAGCATTTTCAAATG
AATGGATGAGAAAGTATAATTTTGCTCCAAATGTTGTAAGATCATTCAAC
AACAAGTTTTGATCGCTTTAATCGAAAACGGAATGGAAATAGGTTTCATG
AAAGTAACCCTGATCTAACTCTCTTTATAATTAAAACATTGTCATTTTTC
ATTCTCTTTGACCCGAAGACAAAGCCGCTCCTCGACTTCTTTAACGGTCT
TAGCAAATTAGATCACAGGATTATAACATAACAAAAACCATTATTAATCA
GCCTCGCTTTCAAAACAATCTTAATTTTGTGGGTTTTCAGAACTTTAAGT
TCCGCGTTTTGTTTGTGGTGAGTAATCGAACTCTTTGATGTATCGATTCT
TTCGTTCAATTAGTGACGAAAAAGCTTCCACCTTGGGTAGAGCACGTTCT
TCCATTGGTCGCCTAAAAATTGAAATGGGCATTTATTGAGCTTATTAAAG
TTCCCTTCAGCGAAATCAATTACCATTGTCCCTTTAAAAGTACCTTATAG
TCGAACTTCAAATACTTATAGCTCGAGAAGCTGCCTTCTTATACTTAATC
TAAATACTCCAAAGAAATGCCAATGAAAAAACGTTTAGTTTTTTTCACAA
ACGGTTTATTCTTCTTTGCTCTCCATAGATGGTTCAGATGCACGTTACTA
CCTGAGCAGACAGTGGGAATCCAATAATTGGGTCATTCATCTCCAAGGAG
GAGGGAGTTGCATCACTTATGACGAATGCAGATCGCGTTCTGAAGGTCCA
CTTGGTTCTTCTCTCCCCCTCGATGCTCATATCACTGGTGAATGGACACT
CTCCAATGACCCGAAGATCAATCCAACTTTTCATAAGTGGAATAAAGTCC
TCATTCCGTACTGCAGGTAACAAACTTGACCTTCTTTACTTACATTTTCT
TTTCCTTTGTAAATATAAAAATCCCAAAAGTCCCTGCTAGAGGATATCTT
TATTGTGTTGGCCTTCGTCAAATGAGCATGACTGGGTTCAATTAAAACAG
TGTCCATCTCGGATAACCTACTCTTTGTAAAATACCGCCTTTACCGTTCA
AATTTGCAGCCGCAAGCACTGTAATTATTTGCAGTTTTTCATTTCTCAAT
AATCCATTCATAGTGGAGATGTGTTTGTTGGCAGGATGTTGAAGAAAAAC
CATCCATACCGGTTACCAATGCTCGGTCATTACATCTTTTCTGCGGTTAT
TGAAGACCTCGTTCGACTTTACAAGATCAACAAGAAGAAAACGAAGGTAA
GTGCAGTGAAATGAAAAGTTTTACTTTCTTTTCAAGAACTTGTTTTTGGT
CTTTCGAACTTTATGTAGCCTGTATTAGACGGCCATTACATAGTGAAGAT
CAGTTACCTTGTGATTTCAAAAATATTTACTTTGTTTGGTGACCGATGTA
ATGGTCAGAATTAATTTTGCTCTTTTCAACCTATAGAAATTAATGGTAGC
GCAACAAACAAGAGGTTTGAGGATCTATTCCCCGCTTCTTCCGGTGTTCA
TTTCATAATTAACCGAGCCGGATGGTCGTAGACCCCGTGAAAACGTCTAA
AAGTCCTAAAATACTGGGTAAAATATCGACTCTATCTAGCTCGTCCTCCA
TTTTAAATTCAAACTTTAAAGTCAATTTCATTGTTTCATCTTCAGATTCT
GTTTGGAGGAACGTCAGCAGGAGGAGTTGGTGTTTTGGCCAATGCTGACT
ATCTTCAAGAAATGACAAAACCTGCCAAGGTAGGTTCCACCGATTCCCTC
CCATTCTAACAATGCAATTTGAAATGCACAAAGTGAAAAATCACTTAGAT
CGTTAAAATGAGACTGACTTTAAAATGAGATGTGACGTAACCTGAGAACT
GAGAAATTTAGGTTTTTGAAAAAGAACATTAGAGATCAAAGATTTATGAT
TGTCATGGTAATCTTCGTTTCCAATCCAGGTGCGAGCTTACAATGATGGC
GGATGGTTTACATTGTTTAGAAGTTTTGGAGAGAAACACAATACGAATCT
TCCGCAATTCTTTCACACGTTGGCTACAGTGAGTATCAGAACTTTTTTAT
ATATAATTATACCAAAAAAGCATAAGCATATTTATACAGAAACAAAGCTT
TCGATTTGTAGATCGGCAGTATCAAATGCTATTTGAAGATCAATGAAAAT
TTAGCACGAATTAGGTTTAAAATGCTTAAATCTTTTGAAAGATTTTGCCA
ATTTAAGAATGATTCCAACTTGAATGGAGAACCCTTGACCACGTTTTCAA
TTCTCTTTGCCGGAAACAAAATTTGTATAATTGACAATCTTCTTATGATC
TTACTTTCAGTTATTCGAGAAACATTGGGATGGTTTTGCGGATAAAACAT
GTCAAAAACACATGCCCAAATCTGCTGCCTGTCTATACGGTGAACTTGGT
AAGCAGCTCTCTTTTTCTTGCTTTTTCAACGTGTATTCGAAATCATGAAA
TGTTCTTTAGAGGTCACTCTTATGCTAATGTAAGAATTTTGATAGGAATT
AAATTTGGCCATCTACTATGATTTGACGATGGCGAATGGCCAAAAAGTTG
TAATTTAATTTGATGGGATTTAATTTAGCGTTTGCAGGATTTAACTTAGA
CTAGTAAACTAGCCGTTGAAAACAGACTCTATCTAAAAATTCAAGCTCAA
AAGAAAAAGCATCGAAAAAGTGATGTTGCGTGTCTTTTTTAAATTTCAAC
GACTAGAAGCTTCTTCCCTCAAAAAACGTTGTTTAATTTTTCAACTTTTT
TTAGATTTTTGAGAAACCATCCAACTAAATGTTATTTCATAGTAACATTG
AACTTAGGAACATAGAAATAAAAGAACAATTGTTAAAACGCAATTAAAAG
AAAGAAAAATAAACGCAAACACGTACGAACCTGACATACAGAAATCTGTA
TGTCTGAGCTTATGATTTTAGCTGAAGAAAAAAAAGGCGTGGAAGAAGCT
TCAAGTCTGTTATTCTCCTTTTGCAGGTACATTTTTAGTTTACTTTTTAT
TATTATTATTATTGTATAGTTCTTATAGCCAGAGTAATTACAGACTTGTT
TACAAGTCTAGATTTAACTTAAAAACTGTTTCCCGAATTCGGGAAATGCA
GGAAATTTGATTTGATGGATTTCGAGTAAATTTCGGGTAAATCCACCAAA
TCCGTTAAATTTCGCCGTATGACCCAAATATTTCTTTATGGGTTTAACCC
ATTCGCTGCCAACTATGAGTATACTCGTAGTAAGGGGGTCAAAATACTGG
GGTAACTTTAAAGCCCAATAACTTTTGATACAGAAATTTTCGAAATCTAC
GTAAAATTCTGCATCCAATGAACGCCAATTTTATGATGTTTGAAGCATTA
TTAAGGCCACAGGATCCTTTGAAAGTCAAGGATTTGTCAAAATTGTAAAA
GGTCAATTTTTCGGTTTTTGGAAATAGCTCGGCAGTGAACGTGTTAAACA
ACTGAAAAGAGTAAATATTTTACGGTAGGTATCATCAAAAAGCTGAAAAA
TATCAATCAGCTTAATCTTTTTTTTTTGCGAGGGTTCATTTTAACTGACC
AATCAAATGCTCTCATTTTAGCCATCCAGTACGTGAAAACGCCAATGTTT
GTGATGACGTCGATGTGGGATTTGTACCAACTCAATCAAATGGTCCCAAG
AACTTCACCAGTCATTCATCTACCTCCTAAATTAAACCAAGAAACTAAAT
ATCTGGAATCGTTTGCTAATAATAGTTATCGCTCCATTACTGGGGTAAGA
TATAAAAGTTACTACAGCTCTAATATCTCAGCATGCCTTCTCTCATCAGA
GAGGTTAAGGCTGAATAATAATCCCAATGGATCGTACATTTTTGTGAACT
GGCCTCAAAAAAACTATCGGCTGTAAATGAACCCGTAGATACGGAAATGT
ACGTGTTATACAGTCTTCTCTGACACTGAGTACAAAATGTCCAGGTTTCG
GTCTCGAATTTTCTTTGAAGGGTTTTTTCTAATTTGAAAATCAAACTTTT
CAATTTTTCAGTTATTGAGGAAGCCGAAGAATGGAGTGTTTTCACCAGCA
TGTTATTCTCACATCTTTTTCACCAATTGTATTGGTGGAATCATCTGTGG
TGCTCCAAAGAAAACCGTATACTCTTCTGGAGGTAAGACATATTTTGATC
ACATTTTCTCGTATTCTGGCTTTTTTAGTTTCAAGATCTATGTAACATTA
TTGCGTCAACAAAAAGTTGCACATTTGTCCTGATTATCAAAATATATAAT
CAAAGTGATAATAAGCTCAGTCAAAGATTGTGTTCCAAAATTTAGAAGCA
CAGTTGATTTCCCGCTCTCCCTGAAGTAAAATTGATGCAAGCACCTAATT
TACAGTTATGCTGGTAAAAGCGGAGCTCATAGTTCTAGTATGACCGACGG
GGGTGTTTATTAAAAACAAAAATTTCTTCTCACCTACAGGTCAGACAGCG
TACGGTGCTTTAACAGACTGGTATCTTACAGATGGTGCTGAAGGGTCGTA
CATTGATGACATAATCGAGTCGCCTACATGTAACCCTAGCTGTTGTACAC
AACATTGTCACAAATGTAAAAGTTTGAATGATATTTTACACGGCACTAAA
AATGGACACACGAACTTAGTGTACCGACATCGAAAACGTAAGAAAGAAAC
AGATACCAAGAATGAAGTCGAACGAAACCATGACAACCAAAACAATTATC
AAAGATTTGTTTATTATTCTAAAAGTTATACTTTGAATCCACATCCATCG
GTGATGTATGCCTTGATGTCGATGGTAAGTCAGATATGGCTGCAACTAAG
GGTATAG Coding sequence (CDS) from alignment at sc0000071_pilon:898911..904667- >XLOC_044658 ID=XLOC_044658|Name=XLOC_044658|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2994bp|location=Sequence derived from alignment at sc0000071_pilon:898911..904667- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCACCTTGGTTTATCTTTCCTGCTTTTGACTTGTTTTTGGACACC
AACATTTTCGGACAATGCAGATAGTTTTGCACATGCGCAAGAGATGTTTG
AACAACGTCTTCGAATGCATAGTCGACATCACTGGAATAATTTATCGTTA
AAGAGAATCCATAAAGCAAGACGAAGGAACGCCACTTGTATGGATGGATC
ACCTTGGTTTATCTTTCCTGCTTTTGACTTGTTTTTGGACACCAACATTT
TCGGACAATGCAGATAGTTTTGCACATGCGCAAGAGATGTTTGAACAACG
TCTTCGAATGCATAGTCGACATCACTGGAATAATTTATCGTTAAAGAGAA
TCCATAAAGCAAGACGAAGGAACGCCACTTGTATGGATGGTTCAGATGCA
CGTTACTACCTGAGCAGACAGTGGGAATCCAATAATTGGGTCATTCATCT
CCAAGGAGGAGGGAGTTGCATCACTTATGACGAATGCAGATCGCGTTCTG
AAGGTCCACTTGGTTCTTCTCTCCCCCTCGATGCTCATATCACTGGTGAA
TGGACACTCTCCAATGACCCGAAGATCAATCCAACTTTTCATAAGTGGAA
TAAAGTCCTCATTCCGTACTGCAGATGGTTCAGATGCACGTTACTACCTG
AGCAGACAGTGGGAATCCAATAATTGGGTCATTCATCTCCAAGGAGGAGG
GAGTTGCATCACTTATGACGAATGCAGATCGCGTTCTGAAGGTCCACTTG
GTTCTTCTCTCCCCCTCGATGCTCATATCACTGGTGAATGGACACTCTCC
AATGACCCGAAGATCAATCCAACTTTTCATAAGTGGAATAAAGTCCTCAT
TCCGTACTGCAGTGGAGATGTGTTTGTTGGCAGGATGTTGAAGAAAAACC
ATCCATACCGGTTACCAATGCTCGGTCATTACATCTTTTCTGCGGTTATT
GAAGACCTCGTTCGACTTTACAAGATCAACAAGAAGAAAACGAAGTGGAG
ATGTGTTTGTTGGCAGGATGTTGAAGAAAAACCATCCATACCGGTTACCA
ATGCTCGGTCATTACATCTTTTCTGCGGTTATTGAAGACCTCGTTCGACT
TTACAAGATCAACAAGAAGAAAACGAAGATTCTGTTTGGAGGAACGTCAG
CAGGAGGAGTTGGTGTTTTGGCCAATGCTGACTATCTTCAAGAAATGACA
AAACCTGCCAAGATTCTGTTTGGAGGAACGTCAGCAGGAGGAGTTGGTGT
TTTGGCCAATGCTGACTATCTTCAAGAAATGACAAAACCTGCCAAGGTGC
GAGCTTACAATGATGGCGGATGGTTTACATTGTTTAGAAGTTTTGGAGAG
AAACACAATACGAATCTTCCGCAATTCTTTCACACGTTGGCTACAGTGCG
AGCTTACAATGATGGCGGATGGTTTACATTGTTTAGAAGTTTTGGAGAGA
AACACAATACGAATCTTCCGCAATTCTTTCACACGTTGGCTACATTATTC
GAGAAACATTGGGATGGTTTTGCGGATAAAACATGTCAAAAACACATGCC
CAAATCTGCTGCCTGTCTATACGGTGAACTTGTTATTCGAGAAACATTGG
GATGGTTTTGCGGATAAAACATGTCAAAAACACATGCCCAAATCTGCTGC
CTGTCTATACGGTGAACTTGCCATCCAGTACGTGAAAACGCCAATGTTTG
TGATGACGTCGATGTGGGATTTGTACCAACTCAATCAAATGGTCCCAAGA
ACTTCACCAGTCATTCATCTACCTCCTAAATTAAACCAAGAAACTAAATA
TCTGGAATCGTTTGCTAATAATAGTTATCGCTCCATTACTGGGCCATCCA
GTACGTGAAAACGCCAATGTTTGTGATGACGTCGATGTGGGATTTGTACC
AACTCAATCAAATGGTCCCAAGAACTTCACCAGTCATTCATCTACCTCCT
AAATTAAACCAAGAAACTAAATATCTGGAATCGTTTGCTAATAATAGTTA
TCGCTCCATTACTGGGTTATTGAGGAAGCCGAAGAATGGAGTGTTTTCAC
CAGCATGTTATTCTCACATCTTTTTCACCAATTGTATTGGTGGAATCATC
TGTGGTGCTCCAAAGAAAACCGTATACTCTTCTGGAGTTATTGAGGAAGC
CGAAGAATGGAGTGTTTTCACCAGCATGTTATTCTCACATCTTTTTCACC
AATTGTATTGGTGGAATCATCTGTGGTGCTCCAAAGAAAACCGTATACTC
TTCTGGAGGTCAGACAGCGTACGGTGCTTTAACAGACTGGTATCTTACAG
ATGGTGCTGAAGGGTCGTACATTGATGACATAATCGAGTCGCCTACATGT
AACCCTAGCTGTTGTACACAACATTGTCACAAATGTAAAAGTTTGAATGA
TATTTTACACGGCACTAAAAATGGACACACGAACTTAGTGTACCGACATC
GAAAACGTAAGAAAGAAACAGATACCAAGAATGAAGTCGAACGAAACCAT
GACAACCAAAACAATTATCAAAGATTTGTTTATTATTCTAAAAGTTATAC
TTTGAATCCACATCCATCGGTGATGTATGCCTTGATGTCGATGGTAAGTC
AGATATGGCTGCAACTAAGGGTATAGGTCAGACAGCGTACGGTGCTTTAA
CAGACTGGTATCTTACAGATGGTGCTGAAGGGTCGTACATTGATGACATA
ATCGAGTCGCCTACATGTAACCCTAGCTGTTGTACACAACATTGTCACAA
ATGTAAAAGTTTGAATGATATTTTACACGGCACTAAAAATGGACACACGA
ACTTAGTGTACCGACATCGAAAACGTAAGAAAGAAACAGATACCAAGAAT
GAAGTCGAACGAAACCATGACAACCAAAACAATTATCAAAGATTTGTTTA
TTATTCTAAAAGTTATACTTTGAATCCACATCCATCGGTGATGTATGCCT
TGATGTCGATGGTAAGTCAGATATGGCTGCAACTAAGGGTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000071_pilon | genome | sc0000071_pilon:898911..904667 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1132-1497:367 |
| Aaloc | 1009-1128:797 |
| Aaloc | 838-1008:1235 |
| Aaloc | 748-834:2498 |
| Aaloc | 649-747:2879 |
| Aaloc | 565-648:3163 |
| Aaloc | 433-564:3694 |
| Aaloc | 196-429:4178 |
| Aaloc | 1-192:5758 |
|
