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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:404682..406553+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044631 ID=XLOC_044631|Name=XLOC_044631|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1872bp|location=Sequence derived from alignment at sc0000104_pilon:404682..406553+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGTAAATGCATTTTCAATTGCATTGCTGTTACATTATCTCAGTGA
AACCAATGTGGTGGATTGCCAAAGACCATCAGTCAGTTTACTGCTTCATC
CGGATCGAAACTGGTCTTCCATAGGATGTCCTAGCTCAGTAACAAACCAT
GATTCACAAACAGATCATTTCAAAGACAATAATGTTCGATTTATTTGTCG
GTTAGTGGAAAGAGATAAACAGATTGTTGACTATCCATATCATTTCACAT
TGTTTATGATGGTTGATTCGAAATCGATTCTCAATTATGGTTGTCAGACA
ATAGGGCATTGTTTCTCAATAAGTATTACACAACCTGGAACAGATCAAAT
CCAAATTGAGATCAAGACATTTAAAGAATGCTTTACAGGTCGTATACCAT
TTCGTTTTGAATTACGGCAAATAAACACCTTAATAAGCGCTGGCACGCTG
AATGTTATTTTTGCCCGACAAGTTGTGGTACCTTTACGTCTCAATTTCCG
TTTGAACCAATCAATGCCGATTGCTTTGGATGGGAATGTAGATATCCAAT
GCGCGGAAGATTTTAAAACTTCAGTTTACGAGATGGTATATAGCGTTCGT
GGTAAACCAGAATGCCAAACAAGTAATTTTACTGTTTGCCAGAAATTCCA
ACATGGGAAAGATGTATTTTCGATTAGTTGCCCATTAGATACTGTTTGTG
ATTCAGATATCATGTGCAGTGCAATTATAACAGCACAAATATTCACTTAT
AATAAATTTGGACAAATGAGCAAACCAAGCAGGAAATTCTCAAAATCTTT
AGCGTTTCTTACGAGTCGTGGAGAAATAGATTTGAATATTACAGGACAGA
CTTTAAACACGATgacattttctttccaaagaccAGTCAGCTGTACTGAA
GTTCATCAACACTTCCAATACAGAATCATATATAAAAATGCTGACAGCGA
CGATGAGAAATGGACAAATTTCAAAGGTGAAACTTGCATCTCAAACGATG
CCGGCAACAAAGAGTCTACCGATTCTGGACATTGCAGTGTCTTACTAAAT
AGTTTACACATGAACACAATGTATAACATTTGTTTATCCTATCGAAACAT
ATTTGATATCCAAGAAAGATACAGTGCGCTTATTTGCCAGAACTCCAGTA
CGGCTCAATTACCATGCACTCCACCTAGATTAACCAAGATTCTACCAATT
GAAGACAATGCTGATAACAATCACTGGAAAGCTAATCTGTATTGGACTCA
AGTGGAGCCAGATTGCTGGAACGACAAGTATGACTCAAATTCTACCCACC
ATTACTATCTAATAGAGCTTTACGATGGAAATCAGACTCAAGAGATAGCA
GTCCCATCTTTTCAGAACTATTCGATAGACATTTTAACTCGTCTTCGATA
CAAGCATAAATACATGGTCTTGCTATCAGCTTGTAATGTTTACGGATGCA
TTAATGGTCCCAAGAGTTATATGTATGTACTGAAAGAGAAGGAGGGTGAT
ACTGGTCATCAATCATCTCAAACTTTAACAGAAACCGTTTTGATATGTGT
TCTCTCACTGTTATTCTTGACTGCTAGTAGCTGTCTATATTGGATACTCA
AAAAACGTAAACAATTTCAACGCTTTCAAACGATGAAACGAAAATTGAAG
CCAGAGGATATAAAAGTGGTGAGACCTGATTGTGAGATGGTTGATCTCAC
TACAGGGAAGCTTACCCCTCGAGGTGGAGTGGTAGCTGAGGAGGGAGCTC
TCGCCTCTAAGATACATCCTGATGATAGACGCATAATAACGGTCGATACT
AGACCGTTGCTAAGCCGGAAAATCAGTATTGTTAATAGTGGCGTTGTGCC
TGCGAACAGCACTTTGGTTTGA Coding sequence (CDS) from alignment at sc0000104_pilon:404682..406553+ >XLOC_044631 ID=XLOC_044631|Name=XLOC_044631|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3744bp|location=Sequence derived from alignment at sc0000104_pilon:404682..406553+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGTAAATGCATTTTCAATTGCATTGCTGTTACATTATCTCAGTGA
AACCAATGTGGTGGATTGCCAAAGACCATCAGTCAGTTTACTGCTTCATC
CGGATCGAAACTGGTCTTCCATAGGATGTCCTAGCTCAGTAACAAACCAT
GATTCACAAACAGATCATTTCAAAGACAATAATGTTCGATTTATTTGTCG
GTTAGTGGAAAGAGATAAACAGATTGTTGACTATCCATATCATTTCACAT
TGTTTATGATGGTTGATTCGAAATCGATTCTCAATTATGGTTGTCAGACA
ATAGGGCATTGTTTCTCAATAAGTATTACACAACCTGGAACAGATCAAAT
CCAAATTGAGATCAAGACATTTAAAGAATGCTTTACAGGTCGTATACCAT
TTCGTTTTGAATTACGGCAAATAAACACCTTAATAAGCGCTGGCACGCTG
AATGTTATTTTTGCCCGACAAGTTGTGGTACCTTTACGTCTCAATTTCCG
TTTGAACCAATCAATGCCGATTGCTTTGGATGGGAATGTAGATATCCAAT
GCGCGGAAGATTTTAAAACTTCAGTTTACGAGATGGTATATAGCGTTCGT
GGTAAACCAGAATGCCAAACAAGTAATTTTACTGTTTGCCAGAAATTCCA
ACATGGGAAAGATGTATTTTCGATTAGTTGCCCATTAGATACTGTTTGTG
ATTCAGATATCATGTGCAGTGCAATTATAACAGCACAAATATTCACTTAT
AATAAATTTGGACAAATGAGCAAACCAAGCAGGAAATTCTCAAAATCTTT
AGCGTTTCTTACGAGTCGTGGAGAAATAGATTTGAATATTACAGGACAGA
CTTTAAACACGATgacattttctttccaaagaccAGTCAGCTGTACTGAA
GTTCATCAACACTTCCAATACAGAATCATATATAAAAATGCTGACAGCGA
CGATGAGAAATGGACAAATTTCAAAGGTGAAACTTGCATCTCAAACGATG
CCGGCAACAAAGAGTCTACCGATTCTGGACATTGCAGTGTCTTACTAAAT
AGTTTACACATGAACACAATGTATAACATTTGTTTATCCTATCGAAACAT
ATTTGATATCCAAGAAAGATACAGTGCGCTTATTTGCCAGAACTCCAGTA
CGGCTCAATTACCATGCACTCCACCTAGATTAACCAAGATTCTACCAATT
GAAGACAATGCTGATAACAATCACTGGAAAGCTAATCTGTATTGGACTCA
AGTGGAGCCAGATTGCTGGAACGACAAGTATGACTCAAATTCTACCCACC
ATTACTATCTAATAGAGCTTTACGATGGAAATCAGACTCAAGAGATAGCA
GTCCCATCTTTTCAGAACTATTCGATAGACATTTTAACTCGTCTTCGATA
CAAGCATAAATACATGGTCTTGCTATCAGCTTGTAATGTTTACGGATGCA
TTAATGGTCCCAAGAGTTATATGTATGTACTGAAAGAGAAGGAGGGTGAT
ACTGGTCATCAATCATCTCAAACTTTAACAGAAACCGTTTTGATATGTGT
TCTCTCACTGTTATTCTTGACTGCTAGTAGCTGTCTATATTGGATACTCA
AAAAACGTAAACAATTTCAACGCTTTCAAACGATGAAACGAAAATTGAAG
CCAGAGGATATAAAAGTGGTGAGACCTGATTGTGAGATGGTTGATCTCAC
TACAGGGAAGCTTACCCCTCGAGGTGGAGTGGTAGCTGAGGAGGGAGCTC
TCGCCTCTAAGATACATCCTGATGATAGACGCATAATAACGGTCGATACT
AGACCGTTGCTAAGCCGGAAAATCAGTATTGTTAATAGTGGCGTTGTGCC
TGCGAACAGCACTTTGGTTTGAATGAATGTAAATGCATTTTCAATTGCAT
TGCTGTTACATTATCTCAGTGAAACCAATGTGGTGGATTGCCAAAGACCA
TCAGTCAGTTTACTGCTTCATCCGGATCGAAACTGGTCTTCCATAGGATG
TCCTAGCTCAGTAACAAACCATGATTCACAAACAGATCATTTCAAAGACA
ATAATGTTCGATTTATTTGTCGGTTAGTGGAAAGAGATAAACAGATTGTT
GACTATCCATATCATTTCACATTGTTTATGATGGTTGATTCGAAATCGAT
TCTCAATTATGGTTGTCAGACAATAGGGCATTGTTTCTCAATAAGTATTA
CACAACCTGGAACAGATCAAATCCAAATTGAGATCAAGACATTTAAAGAA
TGCTTTACAGGTCGTATACCATTTCGTTTTGAATTACGGCAAATAAACAC
CTTAATAAGCGCTGGCACGCTGAATGTTATTTTTGCCCGACAAGTTGTGG
TACCTTTACGTCTCAATTTCCGTTTGAACCAATCAATGCCGATTGCTTTG
GATGGGAATGTAGATATCCAATGCGCGGAAGATTTTAAAACTTCAGTTTA
CGAGATGGTATATAGCGTTCGTGGTAAACCAGAATGCCAAACAAGTAATT
TTACTGTTTGCCAGAAATTCCAACATGGGAAAGATGTATTTTCGATTAGT
TGCCCATTAGATACTGTTTGTGATTCAGATATCATGTGCAGTGCAATTAT
AACAGCACAAATATTCACTTATAATAAATTTGGACAAATGAGCAAACCAA
GCAGGAAATTCTCAAAATCTTTAGCGTTTCTTACGAGTCGTGGAGAAATA
GATTTGAATATTACAGGACAGACTTTAAACACGATgacattttctttcca
aagaccAGTCAGCTGTACTGAAGTTCATCAACACTTCCAATACAGAATCA
TATATAAAAATGCTGACAGCGACGATGAGAAATGGACAAATTTCAAAGGT
GAAACTTGCATCTCAAACGATGCCGGCAACAAAGAGTCTACCGATTCTGG
ACATTGCAGTGTCTTACTAAATAGTTTACACATGAACACAATGTATAACA
TTTGTTTATCCTATCGAAACATATTTGATATCCAAGAAAGATACAGTGCG
CTTATTTGCCAGAACTCCAGTACGGCTCAATTACCATGCACTCCACCTAG
ATTAACCAAGATTCTACCAATTGAAGACAATGCTGATAACAATCACTGGA
AAGCTAATCTGTATTGGACTCAAGTGGAGCCAGATTGCTGGAACGACAAG
TATGACTCAAATTCTACCCACCATTACTATCTAATAGAGCTTTACGATGG
AAATCAGACTCAAGAGATAGCAGTCCCATCTTTTCAGAACTATTCGATAG
ACATTTTAACTCGTCTTCGATACAAGCATAAATACATGGTCTTGCTATCA
GCTTGTAATGTTTACGGATGCATTAATGGTCCCAAGAGTTATATGTATGT
ACTGAAAGAGAAGGAGGGTGATACTGGTCATCAATCATCTCAAACTTTAA
CAGAAACCGTTTTGATATGTGTTCTCTCACTGTTATTCTTGACTGCTAGT
AGCTGTCTATATTGGATACTCAAAAAACGTAAACAATTTCAACGCTTTCA
AACGATGAAACGAAAATTGAAGCCAGAGGATATAAAAGTGGTGAGACCTG
ATTGTGAGATGGTTGATCTCACTACAGGGAAGCTTACCCCTCGAGGTGGA
GTGGTAGCTGAGGAGGGAGCTCTCGCCTCTAAGATACATCCTGATGATAG
ACGCATAATAACGGTCGATACTAGACCGTTGCTAAGCCGGAAAATCAGTA
TTGTTAATAGTGGCGTTGTGCCTGCGAACAGCACTTTGGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:404682..406553 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1872:1 |
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