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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:285522..290061+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044622 ID=XLOC_044622|Name=XLOC_044622|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4540bp|location=Sequence derived from alignment at sc0000104_pilon:285522..290061+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAACCgttatctttttttcatttttcgttgCTGTCATCAGCGCAGG
TAAGCTTAAAAGTTCTTATTGCCTTATTCTGTTAGGTaatcccccggggg
gggggcactgaccttgacggccgacggggacgtaccgctggagtttgaaa
agtggaccctgtcagatatgaatgtttggtaaatttgggaccctgtcgga
aaaaaatttattttcccattttcaccctgataagtggcaaaaatgacgaa
atataaacaaaaaattgaaaaagtttcttcagTTCCACCATGCAGCAGTA
AAATTAGATGGCTTGTTTGAAATTCACTGAcgtttgaattttgttttttc
acgtAGCTCCCCGAAATTCCTTTtggaaaaagtataaaattatGGTAATA
TTGAGGTgcattcaaatttatttttttaacaagaaacagctcaataaatc
aaacTGTAAATAGTTCTTGAGATACCagtgccttttttgaaaagtatgaA
CCATAATAAAGATGTACCTCTGATctatgcttttttataagaacacgatg
CTAAATTACGGCAATAACCTTAGACCAAATTAAGCCTATCCCGGCGAAAA
CCCTAACTAACACTAAACCTagcattttaagaacatattaacctgaaaaa
cacaaaataagaATTGGGTTCGGTTGAGACTCATCCAAGATTTACTAGTA
CTTATAAGAAATCGCGTATATGAGTCAGGCCAGTATGATTCCGTTTTCGA
TATATGTCTAGAATTCAGCAAGGCAGAATTTTATTTCTCAGATAATCTCC
CTCTGtatggaaaattatcctccaattgttatccccactgaaaattttca
aataaaccaatccccaCTGCGAAATATTTTGCTACTTttcccactgcccc
cccccacagaattttctaacttgaaaacaaaagaattgaaatccccagcc
ataaaaagtatgggaatatcaatccccatcgagtttcatatttttatcca
cactggctgaaaaaatcctactgggtctgtgagaagggggtgtctctGTT
AAATACATATGAGATACTGACCTAGGTGGTCTTTCGTTACAGAATGCGAC
GTCAGCAAATACAAGAAAATTGGTTGCTTTCAGATCGAGGATGAAGTTCG
ACCAGATTCTTTCCATGAAGTCATCGATTTGGATGAAACTTTTGACATCG
ACAACTATGAGGAACAACTTCCAAAGTAAGACATTTATTAGGGTAATATT
TCTAATCCTCCTGGTAGTACAGCCGGAGATTTGATTTAAGAATACTTCTA
ACGAGCGTGATGCAAACTTGCCCAAAAGAAGGTGAGATATTGCACATTTT
GAGTAAATATCTAGCTCCCTCAGGTGTTCTTGTAGCCCGGGGCCACttGC
agctttttgatagactggatggcgctgataagtggcccagTGTAATTTTG
CAGGCtccattttttggctttgcttgaggtggtagcaaatccaTGCCACT
AGACctacagccaattcgattgacctcaaaatatgccatttttgccctga
ttgccaattattttgcattcgattgacaaaaatttggcaaatgtggcaaa
atttgagtgccataaatgtctccatacaaaacactgttcccacgagacct
gtgttcttttcgctccaattttgccaaagattttgaaaaatagaagacct
tccaatgctaaaaCAAAACCATGCCGATCGGCAATTTGGTTGGTTAAAAA
ATTCACCCGGGCGTATAAACACTTCGCGTTCTACAAACGCCAAAAGAAAA
CTGCTGACGAAGCACCACAAAACAGAAATCAAAATGGCGGCGTAGCGgtg
tacaaatttgccatgaaactatgatcttttgacattgaaaatgTGGATTT
GGTaaagttggtgagtatggcaaattttgaagtcaatcaaattgGCTGCT
AGtccctttttgaagaaaaacaaacagaaaactatcgtagtttcataaac
tttgatgggattttagaaaacattttattgttttgatatttttatataat
ttttgaaaacaaaagtgaaaaaattcaagatggagaAATTCTccagtcta
cttcactggactcagcgccatcaaaatcgtcagaaagcaaagttcagtca
gaagtaagCTCTATAGTCTAGTGTTCCTGTAGACGAACTTTTTCAGTAGC
GTGTCGTCTTATTTGTTCGTTAGTATACCGTGTATAAGGCCTTCTACACA
GTGGCAGAACAGTTCTTAGAAAATTCTGGTCTAGACGAGGATCACTTTAA
TATCAATTCTCCATGTCTCCAGATTAGTATGCGAATGCTTCAGCAAAACG
AAAGATGATTACAAATACTTCTCAATCGGACATAACGGTCATTGCCATGG
TGGCAAATCTTTCCATGCATCAAACCGTACCAACAATGAAGCAGGATGCA
TCGATGTTGGTCATCATAGTGCTGGAGATGAAGAACACGAATATGTTTAC
CAAATCAAAGCTGATGCAGCAACACGTACGTTTCTTTTTAAGAGATTTTT
AAGAGTCAAATATTATTCGGAATTATCGAGCAAATTATAATGGTTGCAAG
TTTTCTTTTTGGGTGCTTTGTTACTTTCAGTAGGTCATGAAGCCACAAAA
GATCTGGGaatatgtatattttttgaggaagaaaaatcagaagaaaaaaa
atttataaatgccATACATTCACTCTTGTGAATATAATGAGCTATCCTAT
TAATGTTTAAGGGAGTTTGGGTAATCTGATTTaagtaaaagtgaaaaaat
aagcttacactggcacttgggtACTTGTTTCCTTCCTTATGAATTTTCAT
CTAAATTTCAGCAATTGATGGTGGAGTCAGTGATTTTGGTCCATGGTCAC
AATGTTCCAAATCATGTGGTGGTGGTAGAAGATCACGTGAGCGCGCATGC
GTAGATCCCATCCCAAACGACCCTGGAAAAGGTTGTGAAAATTTGACTCA
AGTCGAAGAATGCAACACTCAAAACTGCCCAAGTAAGTAAAATGAAGTCT
TTTCAAGGTAATATGATAGACTTGATAAGAATATCAAAAGATTCAGAAAT
TTTAGCTGACCCGGTTGCAAGACTCTCAGAAGGTTTGTTAGTAACTAAAT
AGTATCATTGTTTTATTCTCTGCTGACGTCAATCTCCTAAGTTTTATTCC
TGAAAAAACCATCCCAGTTCAACAGAATGCCCTAAAATATCATTAAACTG
AGACTTATGCTATACTAAACACAGGaaaaaaaCTCCATAATTTTCAGTGA
TCTTTATAATTTGAAatcctaaaataaaaacagagaTACTCCGTCCCTCA
CCGTATTATTTTAGTCGCTTTACAGCCGTGTAAGAGCCTCTAGAGAAACT
CAACGACCTACTGAGACAATGGTTCATTAAAATTACgtaataatagacct
tttcataatttGCGTCACGAACAtaacttgcctcgttttgaaattattgc
caaggtgattaactcccagcggattttattagaACTTCTTtcgatttata
aaaaaatcatttaatgtctcaagggacaaaATCACcatgatttatgaaaa
ggtctattcttaaTCTTAATTTTAATCCATCCTTTTATAGTTAACGGAGC
CTGGGGAGGGTGGTCGGAATTCAGCCAATGTAGCAAGTCTTGTGGAATGG
GTTCACAATCACGAAGCCGTAAATGCAATAGTCCAAAAGAACAATTTGGT
GGGAAGAAATGCGTTGGCAAACACACAGAAACCCAAAGTTGCATGCCACA
AATGTGTACGTATCTTTTGGATTATTTAACAATTATCGTTCGGCAAACCC
GAACCGAGTCCCCTAGTCCGCTTTTTTACGATTCTTATATTACTCAAGAA
AGATTTTATTGCATCCAATATAGACTGGaatcgtttataatgcgtgtaat
tcAGTAGTATAGGCGCTATATGATAATAATtctattgttacgggatttag
ttcgaataaactaaaattgttccctccattactttttgctttatttctac
tatgtctgaattagtcgtctagcttgcagAACTACATCCAATAGAAATAT
TTAAAGATGGTGCAAGTGATACTGGGGATTAAAATCCCtgtaaaacttaa
attatagtTTCTAACACCTTGCCTGAGTTTTTGACACAGAATCCATTGTA
tggtaaaatttcttttctttgaaaaggtgtCAAGGGTAAATCTGATGTTC
GAATCTGTGAAGATAAAGCAGAAACTCTTTCTTGCCCTGCTAACTGGTCA
GTACAAATCCAATCTGGTTCCTACTATGGTCGCAAAAACACATCTGTATG
CAAACGATTCTACAACATCAATTGGTCAACTACATGCGAAGCTAACGGTG
GCAAAGACAAGATGGCTGAATTATGTGATGGCAAAAGGTCGTGTAGTATC
GATTGCAACAATGATCGATTTGGTGATCCTTGTTGGGGAACTAAGAAGTA
TTGTTTAGTCAAATACAAATGTGTTGGTTATgatttgtaa Coding sequence (CDS) from alignment at sc0000104_pilon:285522..290061+ >XLOC_044622 ID=XLOC_044622|Name=XLOC_044622|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2070bp|location=Sequence derived from alignment at sc0000104_pilon:285522..290061+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAACCgttatctttttttcatttttcgttgCTGTCATCAGCGCAGA
TGAAAACCgttatctttttttcatttttcgttgCTGTCATCAGCGCAGAA
TGCGACGTCAGCAAATACAAGAAAATTGGTTGCTTTCAGATCGAGGATGA
AGTTCGACCAGATTCTTTCCATGAAGTCATCGATTTGGATGAAACTTTTG
ACATCGACAACTATGAGGAACAACTTCCAAAAATGCGACGTCAGCAAATA
CAAGAAAATTGGTTGCTTTCAGATCGAGGATGAAGTTCGACCAGATTCTT
TCCATGAAGTCATCGATTTGGATGAAACTTTTGACATCGACAACTATGAG
GAACAACTTCCAAAATTAGTATGCGAATGCTTCAGCAAAACGAAAGATGA
TTACAAATACTTCTCAATCGGACATAACGGTCATTGCCATGGTGGCAAAT
CTTTCCATGCATCAAACCGTACCAACAATGAAGCAGGATGCATCGATGTT
GGTCATCATAGTGCTGGAGATGAAGAACACGAATATGTTTACCAAATCAA
AGCTGATGCAGCAACACATTAGTATGCGAATGCTTCAGCAAAACGAAAGA
TGATTACAAATACTTCTCAATCGGACATAACGGTCATTGCCATGGTGGCA
AATCTTTCCATGCATCAAACCGTACCAACAATGAAGCAGGATGCATCGAT
GTTGGTCATCATAGTGCTGGAGATGAAGAACACGAATATGTTTACCAAAT
CAAAGCTGATGCAGCAACACCAATTGATGGTGGAGTCAGTGATTTTGGTC
CATGGTCACAATGTTCCAAATCATGTGGTGGTGGTAGAAGATCACGTGAG
CGCGCATGCGTAGATCCCATCCCAAACGACCCTGGAAAAGGTTGTGAAAA
TTTGACTCAAGTCGAAGAATGCAACACTCAAAACTGCCCAACAATTGATG
GTGGAGTCAGTGATTTTGGTCCATGGTCACAATGTTCCAAATCATGTGGT
GGTGGTAGAAGATCACGTGAGCGCGCATGCGTAGATCCCATCCCAAACGA
CCCTGGAAAAGGTTGTGAAAATTTGACTCAAGTCGAAGAATGCAACACTC
AAAACTGCCCAATTAACGGAGCCTGGGGAGGGTGGTCGGAATTCAGCCAA
TGTAGCAAGTCTTGTGGAATGGGTTCACAATCACGAAGCCGTAAATGCAA
TAGTCCAAAAGAACAATTTGGTGGGAAGAAATGCGTTGGCAAACACACAG
AAACCCAAAGTTGCATGCCACAAATGTTTAACGGAGCCTGGGGAGGGTGG
TCGGAATTCAGCCAATGTAGCAAGTCTTGTGGAATGGGTTCACAATCACG
AAGCCGTAAATGCAATAGTCCAAAAGAACAATTTGGTGGGAAGAAATGCG
TTGGCAAACACACAGAAACCCAAAGTTGCATGCCACAAATGTgtgtCAAG
GGTAAATCTGATGTTCGAATCTGTGAAGATAAAGCAGAAACTCTTTCTTG
CCCTGCTAACTGGTCAGTACAAATCCAATCTGGTTCCTACTATGGTCGCA
AAAACACATCTGTATGCAAACGATTCTACAACATCAATTGGTCAACTACA
TGCGAAGCTAACGGTGGCAAAGACAAGATGGCTGAATTATGTGATGGCAA
AAGGTCGTGTAGTATCGATTGCAACAATGATCGATTTGGTGATCCTTGTT
GGGGAACTAAGAAGTATTGTTTAGTCAAATACAAATGTGTTGGTTATgat
ttgtaagtgtCAAGGGTAAATCTGATGTTCGAATCTGTGAAGATAAAGCA
GAAACTCTTTCTTGCCCTGCTAACTGGTCAGTACAAATCCAATCTGGTTC
CTACTATGGTCGCAAAAACACATCTGTATGCAAACGATTCTACAACATCA
ATTGGTCAACTACATGCGAAGCTAACGGTGGCAAAGACAAGATGGCTGAA
TTATGTGATGGCAAAAGGTCGTGTAGTATCGATTGCAACAATGATCGATT
TGGTGATCCTTGTTGGGGAACTAAGAAGTATTGTTTAGTCAAATACAAAT
GTGTTGGTTATgatttgtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:285522..290061 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 724-1035:4229 |
| Aaloc | 559-720:3643 |
| Aaloc | 388-555:2864 |
| Aaloc | 184-384:2324 |
| Aaloc | 52-180:1095 |
| Aaloc | 1-48:1 |
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