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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:293236..295418+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044621 ID=XLOC_044621|Name=XLOC_044621|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2183bp|location=Sequence derived from alignment at sc0000104_pilon:293236..295418+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGTTCTGTTGGCATTCGTCGTTACAATTGTGTTGGCTAACGCAGC
AAGTAAGTCATTTGCCCTTTATTTTGGGTGGTCCATCAATCTTTTGCATT
ATTCTGCACAATTGAAATGTTTCAGATGCTTATCTATCttcaatttatca
aaaacactacgatttttgatacaaaaaaacctttaaggataaagaaaaaa
aaatattggaaatttcaaaaatatttgaagaaatatttcaaaaaacaata
agaagtttgtttatgaaaaaaatccctcTAGAATTAACCTATTTGGAAAG
TTAAGTCTTTCCAGCCTCAAACATCAAACTTTCTATGGATCCCTGACGGC
GTAGGGTTCTTGTTTACACATATAAGGTACCTCTAATCCCAGTACCAATG
GGGCATTCAAACAGGGAGCAtgttcatgtttttcttttacatCTTGTAGA
ACAATGCAAGGTTGACAAGAAGTACAGAGTGGACTGTGGACATTCTCTTA
TCAAGAAAAGTGAATGTGAACGTAAACATTGTTGTTGGAGTCCTTTGGAA
GAAAATAGTAAAGAGCCATGGTGCTTCTTCCCTGGAAGAGCTGTTAATTT
TggtaaatatattttcaaaactgtagaAGAACGGTTGGTATTAGACGATG
TTATTGTCTATTAGaatgatagtaaaggcgggaaaatatcaTACATAAAA
TATCATAGAGAGGACTTTAGAGCCGTTATGGCAGCCGGTATATAGGGAAA
GAAAATCGGCGGGAGAATTTCGAAGAAGACTGGCAGACTTAATCAGATGT
AAactattttcggcaaaaagcccgtttgcgaattttcttcggctttgggc
ttatttcttagatagtgatttgtctaaggctatagcatagtctaagtTGG
TATTTGCACAAAAGCGTGAGGGAATGAGTTCTGCCGGGggaggtactagg
tttgcgaaatGACAAAGGGTAGCCGCCCCACTTTTGAAAATCGGAAATTT
AGGGTATAAAATTGAGGAAAGCCGAATATTTGTGAATTTTAGAACCCTTA
CCAGGACTACTATCCAAAAAGTGTAGCCTTTTTAGGGATAAATATCGGAG
TTAGTGGTTTTTTGTAACCTTTaggggactgaaattagatactgtgattt
ttacgacccttagagggactttgAACATCCAAAAAGGCACCATTAAGGGC
AGCACATACCCATACCTTGCTTTTCAACGTAGGGTCtatcatttttcaaa
tcttatgCTTCATTTTCCACTATTTTTATTTAGGTTTTCCAAACAGTTTC
TTTGGAACTGAAGCATCAGAAGGAACTGAGCAACCAGAAGAAACCGAAGG
ACCCGGAGGAACACAAGAACAGGAAACACCACAAGGCCCATTTGTAACAG
AGGGACCCgaaaaaacagaggaaccagaagagacagaaaaaccacaagca
acaaaaagaccatttaaaacagaGGCATCAGAAGGAACAGAGACCCCAGA
GGGAACTGAGGGACCCGTAGGAACCGAGGCACCAGAGGGAACTGAGGCAC
CAGAAGGAACAGAGACCCCAGATGAAACTGAGGGACCAGAGGGAACTGGG
GGACCCGTAGGAACCGAGGAACCAGAGGGAACTGAGGGACCTGTAGAAAC
CGACAGACCAGATGGAACAGAAGAACCAATTGAAACAGAAAGACCTCAGA
TAACCaaaggtttgattttttttaacgtttttcggACTTCGAACAGGGTA
ATATGAAAGAGACATTATGGATAGGAGGAAAGGTTTGTAGGTTTCCACAA
AGATCAGTCTGTAGTGATACTATCAAATACTATGGAAGGATGACTCAGTT
attcattgttttattttcttcTtttttttcatagCTGGCAAAATGGGTCA
AGTTCGTATTTGCGAAGATGACAGCAGGATCATTTCTTGTAAGAATGAAG
GAAAACTTCAAATCCTCGAAGGTTCTTACTATGGTCGCAAGATAAGCAAA
GGTTGCAAAAAATGGTATCATTACCATTGGAACACATCTTGCGGAGAAGC
ATCAAGTAAAAGAATCATGTCCTTGAAATGTGATGGCAGAAAATCATGTG
AAATCTCTTGCGACAATGAGTCATTTGAGGATCCTTGTTGGGGAACCAAA
AAATACTGCTTAGTCAAATACAAATGTGCTTAA Coding sequence (CDS) from alignment at sc0000104_pilon:293236..295418+ >XLOC_044621 ID=XLOC_044621|Name=XLOC_044621|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1716bp|location=Sequence derived from alignment at sc0000104_pilon:293236..295418+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGTTCTGTTGGCATTCGTCGTTACAATTGTGTTGGCTAACGCAGC
AAATGAAGGTTCTGTTGGCATTCGTCGTTACAATTGTGTTGGCTAACGCA
GCAAAACAATGCAAGGTTGACAAGAAGTACAGAGTGGACTGTGGACATTC
TCTTATCAAGAAAAGTGAATGTGAACGTAAACATTGTTGTTGGAGTCCTT
TGGAAGAAAATAGTAAAGAGCCATGGTGCTTCTTCCCTGGAAGAGCTGTT
AATTTTgAACAATGCAAGGTTGACAAGAAGTACAGAGTGGACTGTGGACA
TTCTCTTATCAAGAAAAGTGAATGTGAACGTAAACATTGTTGTTGGAGTC
CTTTGGAAGAAAATAGTAAAGAGCCATGGTGCTTCTTCCCTGGAAGAGCT
GTTAATTTTgGTTTTCCAAACAGTTTCTTTGGAACTGAAGCATCAGAAGG
AACTGAGCAACCAGAAGAAACCGAAGGACCCGGAGGAACACAAGAACAGG
AAACACCACAAGGCCCATTTGTAACAGAGGGACCCgaaaaaacagaggaa
ccagaagagacagaaaaaccacaagcaacaaaaagaccatttaaaacaga
GGCATCAGAAGGTTTTCCAAACAGTTTCTTTGGAACTGAAGCATCAGAAG
GAACTGAGCAACCAGAAGAAACCGAAGGACCCGGAGGAACACAAGAACAG
GAAACACCACAAGGCCCATTTGTAACAGAGGGACCCgaaaaaacagagga
accagaagagacagaaaaaccacaagcaacaaaaagaccatttaaaacag
aGGCATCAGAAGGAACAGAGACCCCAGATGAAACTGAGGGACCAGAGGGA
ACTGGGGGACCCGTAGGAACCGAGGAACCAGAGGGAACTGAGGGACCTGT
AGAAACCGACAGACCAGATGGAACAGAAGAACCAATTGAAACAGAAAGAC
CTCAGATAACCaaagGAACAGAGACCCCAGATGAAACTGAGGGACCAGAG
GGAACTGGGGGACCCGTAGGAACCGAGGAACCAGAGGGAACTGAGGGACC
TGTAGAAACCGACAGACCAGATGGAACAGAAGAACCAATTGAAACAGAAA
GACCTCAGATAACCaaagCTGGCAAAATGGGTCAAGTTCGTATTTGCGAA
GATGACAGCAGGATCATTTCTTGTAAGAATGAAGGAAAACTTCAAATCCT
CGAAGGTTCTTACTATGGTCGCAAGATAAGCAAAGGTTGCAAAAAATGGT
ATCATTACCATTGGAACACATCTTGCGGAGAAGCATCAAGTAAAAGAATC
ATGTCCTTGAAATGTGATGGCAGAAAATCATGTGAAATCTCTTGCGACAA
TGAGTCATTTGAGGATCCTTGTTGGGGAACCAAAAAATACTGCTTAGTCA
AATACAAATGTGCTTAACTGGCAAAATGGGTCAAGTTCGTATTTGCGAAG
ATGACAGCAGGATCATTTCTTGTAAGAATGAAGGAAAACTTCAAATCCTC
GAAGGTTCTTACTATGGTCGCAAGATAAGCAAAGGTTGCAAAAAATGGTA
TCATTACCATTGGAACACATCTTGCGGAGAAGCATCAAGTAAAAGAATCA
TGTCCTTGAAATGTGATGGCAGAAAATCATGTGAAATCTCTTGCGACAAT
GAGTCATTTGAGGATCCTTGTTGGGGAACCAAAAAATACTGCTTAGTCAA
ATACAAATGTGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:293236..295418 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 562-858:1887 |
| Aaloc | 409-558:1559 |
| Aaloc | 208-405:1286 |
| Aaloc | 55-204:452 |
| Aaloc | 1-51:1 |
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