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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:319378..322246+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044620 ID=XLOC_044620|Name=XLOC_044620|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2869bp|location=Sequence derived from alignment at sc0000104_pilon:319378..322246+ (Clytia hemisphaerica_ch_hm2_pilon)
CCCGaaagtcaaagaaaatttcCGTTCAATAAGAATGATGTGGTTCTTGC
CAAATACGACAATGAAGTATTTTATGCCAAGATTGTTTTGATCAACTATA
AACGTGAATATGCCAAGTGTTTATTTGATGATGGCTCAAGAGAGGATATA
CCTTTCCAAAATATCTTTGATGGTAAGCATTGATTGGTTACTAGACCCCC
CAATAAAACTAAAACTTCTCAGAATCCCTGCCGCGAAAAGTCCAAATAGA
GCCCAAACTTTGATTACAACCTTTGATTGATTAGGTATTGGTAATGCACA
AATTAGCGACGGCTATAAAGATATGTTAGGACGTCCTGACAGGAAACCAA
TAAAAACTATCTGTATTTCcaaaccatttttgatgttATAAGTATTAATT
AGTTACTAGACCCccaataaaactaaaatttctcAGAATCCCTGTGAAAA
GTCTAAAAAGCCCAAATTTACAACCTTTGATTGGTTTGGTGATATAAATA
CAATAGTGACGACCATTAAGCCCCCATTAAGACATGTCAAAACGTCCTGA
CATGAAGAAACCTAATAACAACTCAATGAATGTCGAGAACTTAAGAAACA
CAACAAAACCTTGGTTGGCCCCAACTGTCACTTCAGACTAAGGTGGTCTT
GTTAAATCACTTTCTGGTGTCCGGGGGAAACCAGAAATTAAGCCTCAGGA
ATTATTTGTTCTTGATTTAGATTACGTAGTCATAATATTTCTATCACGGT
ATTTGTGTCCTTAGTAGCAtttttttCTACTAACATTGAAATCCAAtcaa
tgtcttttcatttcgaAAATGTTTGACTTTAAAAGTGAGGTAACCATACA
ATAAAGTACAATAAGTTCCTCATACAATAAAGATGCCTAAACAATCCCGT
TCACACAGACTTGAAGTTGAAAACCCAATTTGTAAAAGTATGACTTAAAA
TTCTCCAATTTTCCATTTGTAGTGAACGAAACGACCTCGGACATTATTTG
TGTGGTATGTAAAAGTGATGCTACTGAACTCAACAACGATATTGTTCTTT
GTGACAACTGTAACGTAGGTAAGAAAGAAATACTATTGGTTGACGTACaa
aaatatttggtttgatcaacTTAAGACCCTTAATAGAACAAATTTCGCAT
TCAGGGGTATAACTAATTTCCGCGACAAGATATTTTGGTCCATATTCGAC
AAGATTAGTTACTTTATTGTCAAAAAACGGATCGCTCGGGAAAAtaagtt
ttcacaaaaattaaaatgctagtTTTTGAATGCTCACAAAAttagttttc
accaaaattgttaaatagaatgggcctttttcaactttttttagacCCAA
ATACAATATGATCATCTACTTTTTCCGGGAAAAAGAGCTTTATACACCCC
CTCGCTTCCATTTTCACTCCATCCTTTAATACCCTAACGTCCGATTTATT
TTCCTCACTTTCGAACAGACGTTTAAAATCCCAGACCTTAACATTACAAA
GTAGTCCCATTTTAAGAGTTTGAGGAGGTAGTCATATAAATGTGGTTTCC
TATTGCAACATAACTTGGCGTAGCTTGGCGCATTTTTAACTTTTCCTGAG
GGAACTTGTACTCCAAAAAGAGCTGATAAAATTTCCTGTAACACGAGCAT
GAGGGTGAAGGAGTGAAAATTCGTCAACACAAAGATGTCCAAACACCCGA
AAGTTAAGATTCCTTTTTGGAGTTCCATCTTCTCTTTGGTATCACTATTC
TTATCAATGATATTCACTTTTAATCTTTAGGATTTCATCAAAAATGTCAC
GAACCAGTCATCCCTTCAGATGTTTTGAAGCCAGAGGCACCATGGAAATG
TGTTTACTGTTCAGACGGTTTGAAAAATCCGTACGTCGAGTCCAACCCCT
TCAATGAAAATGAGGCTGagacaaaagaaaataacaataaagtAAGTATG
TCCAtcgggctcttccagaaaatgtctgtacatgggggtggaggatatag
tttCCGGGGGATAgtgaaaagtttagaaaatttaCCCTGACCAGggagta
aacttgctctgtttgggggtaattttgctctgtttgagggtaattttaat
tttccatggggtcaactgatgcttgtccggggggttagaACTGCTGATca
gggggtcaaaagtcacaatatccaggggggggggtaaatttccagaaaat
gttGCGGTCGCTATCGATTTATATCGAGAAGAGCTCATAATTGCGGTAGA
TACGGACATAAGTCTTATAGACCTAAAATGATATAGAAGACCTAAACAGA
TGTATAACAAGCTAAAATAgattatgtttcatttttttcaggAGGAAAAA
GAAGGATTCCAAGAGGACATTAAACCCGaggaagaaattgaaaataaaat
tgaggAGACGAAAACCAAAAAAGATGAAATAATTACGGATAATCTAGTTG
AAAAAAGTCAATGCGATATTTCAAAGGAATCTGTTACCACTTTAGAAGAT
GTTGATAATAATCTTGAGGATTCGACTCAACAATCACCACAAACTTATGG
TGAACAAGTTGTTATTGCGCATGCGGATAGCACATCAAATGACGATCTCA
TTGTTGATATTGTGAATGAAAATTCAAATAGTGAACCACAAGTCGTTATC
CAAGAGGTTAaggaaaaagttgaagaaaccGACAAAGTTGAAGTAACTTG
CCCACAACAAGCATCAAGAACTGTAAAACagcaaaataaagaaagataTT
TGAGAGACTTTCCTAATCATAACTGGCTTTTAGAACGTTTAAAAACGGAG
AAGAAATTAAACTCAAATGAAATCGAGAAAATTGAACAGACAGTATACAA
GCAACATAAACAAGAAACA Coding sequence (CDS) from alignment at sc0000104_pilon:319378..322246+ >XLOC_044620 ID=XLOC_044620|Name=XLOC_044620|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1152bp|location=Sequence derived from alignment at sc0000104_pilon:319378..322246+ (Clytia hemisphaerica_ch_hm2_pilon)
CCCGaaagtcaaagaaaatttcCGTTCAATAAGAATGATGTGGTTCTTGC
CAAATACGACAATGAAGTATTTTATGCCAAGATTGTTTTGATCAACTATA
AACGTGAATATGCCAAGTGTTTATTTGATGATGGCTCAAGAGAGGATATA
CCTTTCCAAAATATCTTTGATGCCCGaaagtcaaagaaaatttcCGTTCA
ATAAGAATGATGTGGTTCTTGCCAAATACGACAATGAAGTATTTTATGCC
AAGATTGTTTTGATCAACTATAAACGTGAATATGCCAAGTGTTTATTTGA
TGATGGCTCAAGAGAGGATATACCTTTCCAAAATATCTTTGATGTGAACG
AAACGACCTCGGACATTATTTGTGTGTGAACGAAACGACCTCGGACATTA
TTTGTGTGGATGTTGATAATAATCTTGAGGATTCGACTCAACAATCACCA
CAAACTTATGGTGAACAAGTTGTTATTGCGCATGCGGATAGCACATCAAA
TGACGATCTCATTGTTGATATTGTGAATGAAAATTCAAATAGTGAACCAC
AAGTCGTTATCCAAGAGGTTAaggaaaaagttgaagaaaccGACAAAGTT
GAAGTAACTTGCCCACAACAAGCATCAAGAACTGTAAAACagcaaaataa
agaaagataTTTGAGAGACTTTCCTAATCATAACTGGCTTTTAGAACGTT
TAAAAACGGAGAAGAAATTAAACTCAAATGAAATCGAGAAAATTGAACAG
ACAGTATACAAGCAACATAAACAAGAAACAGATGTTGATAATAATCTTGA
GGATTCGACTCAACAATCACCACAAACTTATGGTGAACAAGTTGTTATTG
CGCATGCGGATAGCACATCAAATGACGATCTCATTGTTGATATTGTGAAT
GAAAATTCAAATAGTGAACCACAAGTCGTTATCCAAGAGGTTAaggaaaa
agttgaagaaaccGACAAAGTTGAAGTAACTTGCCCACAACAAGCATCAA
GAACTGTAAAACagcaaaataaagaaagataTTTGAGAGACTTTCCTAAT
CATAACTGGCTTTTAGAACGTTTAAAAACGGAGAAGAAATTAAACTCAAA
TGAAATCGAGAAAATTGAACAGACAGTATACAAGCAACATAAACAAGAAA
CA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:319378..322246 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 217-588:2498 |
| Aaloc | 187-216:975 |
| Aaloc | 13-183:1 |
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