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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:411203..418138+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044616 ID=XLOC_044616|Name=XLOC_044616|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6936bp|location=Sequence derived from alignment at sc0000104_pilon:411203..418138+ (Clytia hemisphaerica_ch_hm2_pilon) AACCtgacagaaaatttcaaacgaCAGACAACGATTCAACACAAGGAAAA
CCAGTCGATCTCAAAACGTAGAGACAATCTGACAGAtttgaaaaaacatt
caaataacAAACAAGATGGTCATCAAACCAATTCTACTAAACGGCAAACA
ATCACACACCAGGAGAATCTCATCAAACGATCATTCATTATACACGATGA
AGACGAGGTGTTGAAAAGGTCATTGGTATCAACCATGTATGACTATTTAg
ccgaagatgaaaatgaagtgGCCGCAACCGATAATTGCCATGACGACGCA
CTCCAGGTGAGTAAATTAGAATTCACCCGTGGaaaaaaaGGTTGATAATC
ACAATGTACGAACGCCCCTAAAGACCCTTACTATCGGTCATTTATTGTAA
CTCTCGGGATCAAACCCTGCCACTAACTGATGATAACTTAACCCCTGTCT
TCCAGGGTAAATCTTAGCGACCCATGAATAATGAATAAGTATTTGGTGAT
CCTATAGGTATATGAGTTACTACTTAGTTTACACAATAGGTTTACACAAT
CAGGCTTTTAGACCTTACTTTTggagagtaggagttttacgctcgaaacg
aagatatgacgtagcctatatAAGAGTATCCTTTTCAACCTCACAGAAAC
GTGTAGCTGAAATCATCAACGGTGGACcggaaaaattaaaacaagccTGG
ATGAAACGTCTGCATTTCGTCAACGAGTCTGTATTAGACGTTGGTAATTT
CATCCCGTTAGTGTTATCTAGATGGTATTGTTCTGGTCATGGTTGTGGCC
TGGACCAAGTTGCAGTCGAAGGGAAAGAGGGTAGGTACTAAATCTTAAgt
ttttaccctttttgttacgcacgttttttgttgttttttttagtataaga
gcaattttataagaaacatgagactccaaacaaaagttaaaatgtgTTAG
CCTATTTCATTACAAAAACCAGTTTTGATGGCAAGCAAGAAAGTTACCTT
GTTCGCATTTTATGAAATGAAGACTCTCGTCCCGAAGACTAAAATacaca
agaagaaaaaacatttgataGTCGCATTCTTTTTGTAATCcgagttaatt
tttttaatagaagGTTCAGTGAAGCTAGTAAGCAAGCGATTGGACGGACG
ATACGATTGGTTGACTTCGCCGTATAGTATCAAACAAAAACGTGCGAAAA
TTGTGGACATAGGTGACGGATGTGACAACTCTACCAGTACTAAGTACACC
AATACTGTTGTCTTGATCTCCAATAATAACACTTGCACATATTTCCAAAA
GGTAATCGACTAAGATATAAGTCAACtccctctaattcgaacctctctaa
ttcgaacctctataaatcgaatctttctatagttcaaattaaaatattgg
tccccttaACTGGTCAGTcgttataaaatattttacgtAATTCGAAATTC
TCTGTAAtttgaagaacatttttggtTCCATCAAGACCGGATTAGACAGA
GTCAACGTActgctagtctgaatcgcagacctctatagatatacttccta
tatgtATATgagaaactcttttcgctagaggatgagcagaagcctaacgT
ACTGTGGTAACATTTTCTGGTGTGGTCAAGTAGTTAGCggtctttttaaa
gaatttcgcACCcctcattatatattttttacacTGGCTCTGATTACTGt
gggcgcgttcacactggaaagtttacctaattaaatctatcaaagttaaa
caaagagatttatgatggatgaatacactggtttattacagttctttgta
ggttcacgagatctattataacatgttaattgattttgcttaaggcttct
cattggttgattttttattgagagtttcgatttcacctgtgattggttga
tattggtatccatacatcacttgaaatccgcaaGCATATTTGTTCTAATG
ATTTTACTCATTAATTGCATTAatcttacacatcaacaacaccgtttgca
ctatttctaatttttttcttagttcattcgtttttgaaatcgtaaaactt
ttttttcactgcacgcattctttgtttatgcttccttaataaaatctttt
gttttaagggtagcctctaccctacccttaggacaatagagcttacgacg
cttaattaaggaagatcgattaaaaattacaatactacgcgttcgactct
ttgttaaatgcacgttctgtattgtagtcaacaaaagattctcctaacta
catttttattaaggaaggtctgtagtgtgaacacgacctGTATCTTACTA
AAAGGGTATAACATGTTAGTGGAGAAAGAAATGAAACGATAAATGTAATT
AATTTACTTTTTGGAACCCAACAGAATCATCAATTAAGTGGATGTGTTAA
ATTATGGTCACactttttaaaacttaaagACCATTTAAAGTTTACAGCAT
TAGAACCTTAACAATTTATTTTAGCTGAAGAATGCACAGGAGAAGGGGGC
ATTGTGTGCAGTCATTTATGCCAATAATGGAGAAACGTTATTCGATATGA
CTTGTCAGAATGCTGAGTGTGAGGTATAACATGCTTTATATACATCTGTT
TACtacgcgttttttataagaataaactatctaagaacacaaggcttcga
tgtcCAAAATgctgttaagaacattttaagctttgcagactctaaaacac
ccgatttcttagtaaaatagacaaatatactcaaaaaatggcgaaaataa
gaacatgttaaaagaacatttttaagaacatccaaaggcttcaaaaattt
tggatgttcttataagaaaacgtgtattacaATTGGACCACTATCCATCT
AACCATGGGTAAACGACAGGATGATACAAATTCAGCCTCGACCTCGTCCC
CGCGTATCCATGGCTTTATTTACGCTACGGATGGTCGTCAGAGAATAACT
TACGTTGGCTTATGCGAGTTCAGTGCACAGAGAGGGGGAGGGGATacttt
taagtcattaaaaaccTGACGATCTAGCTTCTGGTATGAGAGGCTTCTGA
GCACCATTTAGAAAGATCGAACTTTTTTCCATATCGGGCTTACGCGCGTT
TTCATACGTCAACGACATCCAAAAGTAATTTAAGTGAATCAGACTTAATT
GATTAATTCTCGAATGTGGAATATTCAAATTGGCGGGGGTTCACTAAAGT
TTCCAGAGAACCAATCATTTACTTTCTGAAATCAGGTGGAGATGAAGATC
CCAGGAACCATGATTCCTTATGAAGATGGAATCAAAATCAAAGACTTGAT
CAAAAATAACAAAGAGATCAATGTTCACTTTCAACACACACCCTGGTGGA
ATTTCTTTTTCGGCATCGATGAACAAGGAAAACTACAAGAAGTTGGTTGG
CTAGTCTATCCATCCATGATTTTCCTCAGTTACCAGGCTAAATGGTATGT
ATATGATTTCTTTCGATTAGTAAATTAAATGCCAGAACActcaaaatcaa
atcataatACGACTTTACACAACAATTTCGCCAAGATTCAGAAATGCTGT
TCTAAAATCTGACTGATATGGAGACGGAAGGAAGAAAGGCTTAAAATCTC
GCCGGAAAgcctcacttttgaattttttttgcttgaccatgaagcttTAT
CCAACttctacgagttagaccaaaaatgacgatttctaactcaaacttgG
CATTACAGGAGGatttcgccctcctatatagccttGACATGGACAGGGAA
AGGGTTAAATATACGCACCGGACTGTGTCAAGGCATTTCAAACGGATATA
TAAACAGTGTTGAATGCATTGTGCTTTGCTCCTTTatattttctacaaaa
aaaaacagaattctCCCTCGAAATTTTGATATCACTTTGTTGCTTTTCCA
GTTACTTTATTTTGAGTCTCTTCAACTCATAAAAACTAAGGAATGGTCAC
ATGGCAGAACCCTTTTGTTGTATATACCCCTAATAAAATAAAGTATAAAC
TTACAGATCAATGTTGTTCTCTTTCCCATCCATGGTTTGATCTTTGTTTA
CTTCCCATCCTGATttgatcttttatttttcactcAGGTTGAATTACGTG
ACCAATCTTCTTCATGACATCAGTTCAATGAAGCAAAAATCTGATAATGA
AGAGTTAACAATATTTCAAGGGAAGATTATGCAAGGAAACCACGGTGTTG
TGGCATGTCATGAAATCAAAGACAGTGTATTCaaaggtacatgttttttt
tagacATTTAAAGACTTTGAAGCTTTTGGATGTCTAACATACTAATTAGA
AGAAAATTCTTGCTGCCTTGAAAATCAATTTAAGACAGTCAACtgtcaaa
ttttatttgcttttacaGATTTATCAAAATTCGGGCACGTATATTTGGAC
ATGGCTTTAGGATGTCCTGGTTCAACGGATTTCACTTGTCCGCATTGGGA
CCATACCGTACAATTATATTTGAATTGCGGCGAGAGTCGTGTACAATGTa
aagaaaataagaagaaaaaaaggaatcaCCATCAAGTTCGTTTGGGTCCT
GAAATTGGACGTTGGATAACACCATTTAGAAGgtaaataattatttcaat
ttcCACGTAAAGTAAAATTACGCTTGAAAAGGGGCTTTCTAAATGGGAAG
CATTGGGTTTAAAGCCCAAAGAAGAGTAGAATCTCTGacctttcccaggc
aaaaaaagtgaaaccagatatttttcatccagaacgcgcctagaacgcgc
tgtaatcatgacgacgggttgtatctagtggttcctttgtttttgtggac
ttttgtggcgtttttgaaatctagcgatagattttacctTCAGTCCGGTA
TTTGTGTAAAAGCTACGAGCAGGAGTTCTGGATGGGaataagtagcttca
tttcccatccaggagtctcgagtctagtcCTTCGCCCTTGGAAGTCAATG
ATGGAAGGTAAGTTGACCAAGCTAGttgttgaaaataaatgaaatatcaa
GCACCCTGCGCGTTATCTTTTTTGAGCTATTTGATTGGTTGTTAGGATAC
CAATGAAGTAATTCGAGTTGTGAAACTTGAATTTCTAgtgaccaaaaata
aaaaaacacatgtGTTATAATCGCTTTGTAATATTGACAGAACCATTGCC
ATTCATATTTATCTGAAACCTGCTTAGGCAGGTAGTCTTTTAAGTTGACA
TGGACAAGTATGTCAATatattaagggctctggtcatagtgaaaaatcaa
tgtcagaatttgaagataaaaccttctATTTTCGCTTCTTTggcatgttt
aagaacaaactgcttttgaaagaatgaatttaagtaattacatcatgagt
aattaagaaataagtgtggcatggactttaatacagggtgtccctaatta
aagtatcgagtttgaacatgcgattgagtagaaaagtttgtgtgtgttat
cgctaaaatataagaacgttctccatcacacaggcttattacaaaaggta
gttacaacgtataaattaatcgtaatgacaaaaaaaaagagggagagctt
aaaatacaattttttcaagttaatgacaaataatgtttctttatttagat
tttttcggaaaaattttctatttggctacatcccaagttatagctgtttt
cgtatgaaaatttaatggagaaaattgccaaacaTGAGGtcttttggaga
ttttaaaggaaatttaattccacaaaaattttccgaaattgtatttttag
atactaaatagatacatcacctaaaccaaaaaaaattccaaaatgtttga
tttttaccgggataagggctttgaaaggtgaaatactcttcttcgaaaag
ctcttcgttttcttcttcatttatttttttcatctcaatttttcgatttt
taatttaaaatgcagaaattgccattcATTCATCAGTTTTGTTTATCAAT
TTCAGACGTATTGGACGTTGGCTGACCGACATTCGACCACTTGCACCTTT
ATTCACATCGAAATCGTGCACTTTTACCATGAAGACAGTGCCTTGGGCAA
TGCCATGGAAACCATCCTTAAAACTATGGCTGACTGATAAAAAATCTGGT
AACATGCTTATCTCATCTTATATATAACTCAGCGAAAGCTTTTTTACGGA
GTAAGgctcaaatgtcaaaaaataaccTCAATCTAATTTTGTATTATTGA
TGTTATCGTTCGTTACAGGAAATGCAAACGTGGGAAAATATATACGCGCA
TAATTTACAGTAAGAGATGATATAAAGTTGGTATAAAGTCTCAAAACCAT
AATACTGAAATCTTAAGTCCTaggatttaaattttaaatcaatgaTTAGT
ATTAATTATTCAGAgtatgtttttgtattttttaggaaATATTGACCAAC
CGACTATGTTTGAAGAGCTGTTCAGAGGTGGGACGTTCAACGGCTCGTAT
AACTTAGATTCGCCGAAAGGGCGCCGTGAGAAAACCATTAACGTCCCTAA
GAACGTGACCAAAGCTATGCTGTTTGCAACCATCACGGGCCACGGAAGTG
ATGATAATAATTGTGCCGAATTTTGTGTGACATCACACCATTTCCAAATT
AACGAAAACGATAATGAACGAGTGTTTGATAATGCCGGTACAGCAACGGG
ATGCGCGGACCGTGTTTCCGAAGGCTCGGAACCGAATGAACACGGAACGT
GGCTTTACGGCCGGAATGGATGGTGTGACGGAGAGAACGTCGGACCGTGG
ATCGAAGACGTTACAAAACAAATACGCCCTGGCGAAGAGAACACTATCAA
ATATAATGGATTTTTTAATAGTAAAGACCCAGCACCGAAAAGGGATCCAG
GAAATATTATTATGTACTCTTACTTGATTTTTTATACTAAAAGTGGTGGT
GGCCAGGCTAGTGATGACACAAAGAATAATCGTTGA Coding sequence (CDS) from alignment at sc0000104_pilon:411203..418138+ >XLOC_044616 ID=XLOC_044616|Name=XLOC_044616|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4092bp|location=Sequence derived from alignment at sc0000104_pilon:411203..418138+ (Clytia hemisphaerica_ch_hm2_pilon) AACCtgacagaaaatttcaaacgaCAGACAACGATTCAACACAAGGAAAA CCAGTCGATCTCAAAACGTAGAGACAATCTGACAGAtttgaaaaaacatt caaataacAAACAAGATGGTCATCAAACCAATTCTACTAAACGGCAAACA ATCACACACCAGGAGAATCTCATCAAACGATCATTCATTATACACGATGA AGACGAGGTGTTGAAAAGGTCATTGGTATCAACCATGTATGACTATTTAg ccgaagatgaaaatgaagtgGCCGCAACCGATAATTGCCATGACGACGCA CTCCAGAACCtgacagaaaatttcaaacgaCAGACAACGATTCAACACAA GGAAAACCAGTCGATCTCAAAACGTAGAGACAATCTGACAGAtttgaaaa aacattcaaataacAAACAAGATGGTCATCAAACCAATTCTACTAAACGG CAAACAATCACACACCAGGAGAATCTCATCAAACGATCATTCATTATACA CGATGAAGACGAGGTGTTGAAAAGGTCATTGGTATCAACCATGTATGACT ATTTAgccgaagatgaaaatgaagtgGCCGCAACCGATAATTGCCATGAC GACGCACTCCAGAAACGTGTAGCTGAAATCATCAACGGTGGACcggaaaa attaaaacaagccTGGATGAAACGTCTGCATTTCGTCAACGAGTCTGTAT TAGACGTTGGTAATTTCATCCCGTTAGTGTTATCTAGATGGTATTGTTCT GGTCATGGTTGTGGCCTGGACCAAGTTGCAGTCGAAGGGAAAGAGGAAAC GTGTAGCTGAAATCATCAACGGTGGACcggaaaaattaaaacaagccTGG ATGAAACGTCTGCATTTCGTCAACGAGTCTGTATTAGACGTTGGTAATTT CATCCCGTTAGTGTTATCTAGATGGTATTGTTCTGGTCATGGTTGTGGCC TGGACCAAGTTGCAGTCGAAGGGAAAGAGGaagGTTCAGTGAAGCTAGTA AGCAAGCGATTGGACGGACGATACGATTGGTTGACTTCGCCGTATAGTAT CAAACAAAAACGTGCGAAAATTGTGGACATAGGTGACGGATGTGACAACT CTACCAGTACTAAGTACACCAATACTGTTGTCTTGATCTCCAATAATAAC ACTTGCACATATTTCCAAAAGaagGTTCAGTGAAGCTAGTAAGCAAGCGA TTGGACGGACGATACGATTGGTTGACTTCGCCGTATAGTATCAAACAAAA ACGTGCGAAAATTGTGGACATAGGTGACGGATGTGACAACTCTACCAGTA CTAAGTACACCAATACTGTTGTCTTGATCTCCAATAATAACACTTGCACA TATTTCCAAAAGCTGAAGAATGCACAGGAGAAGGGGGCATTGTGTGCAGT CATTTATGCCAATAATGGAGAAACGTTATTCGATATGACTTGTCAGAATG CTGAGTGTGAGCTGAAGAATGCACAGGAGAAGGGGGCATTGTGTGCAGTC ATTTATGCCAATAATGGAGAAACGTTATTCGATATGACTTGTCAGAATGC TGAGTGTGAGGTGGAGATGAAGATCCCAGGAACCATGATTCCTTATGAAG ATGGAATCAAAATCAAAGACTTGATCAAAAATAACAAAGAGATCAATGTT CACTTTCAACACACACCCTGGTGGAATTTCTTTTTCGGCATCGATGAACA AGGAAAACTACAAGAAGTTGGTTGGCTAGTCTATCCATCCATGATTTTCC TCAGTTACCAGGCTAAATGGTGGAGATGAAGATCCCAGGAACCATGATTC CTTATGAAGATGGAATCAAAATCAAAGACTTGATCAAAAATAACAAAGAG ATCAATGTTCACTTTCAACACACACCCTGGTGGAATTTCTTTTTCGGCAT CGATGAACAAGGAAAACTACAAGAAGTTGGTTGGCTAGTCTATCCATCCA TGATTTTCCTCAGTTACCAGGCTAAATGGTTGAATTACGTGACCAATCTT CTTCATGACATCAGTTCAATGAAGCAAAAATCTGATAATGAAGAGTTAAC AATATTTCAAGGGAAGATTATGCAAGGAAACCACGGTGTTGTGGCATGTC ATGAAATCAAAGACAGTGTATTCaaagGTTGAATTACGTGACCAATCTTC TTCATGACATCAGTTCAATGAAGCAAAAATCTGATAATGAAGAGTTAACA ATATTTCAAGGGAAGATTATGCAAGGAAACCACGGTGTTGTGGCATGTCA TGAAATCAAAGACAGTGTATTCaaagATTTATCAAAATTCGGGCACGTAT ATTTGGACATGGCTTTAGGATGTCCTGGTTCAACGGATTTCACTTGTCCG CATTGGGACCATACCGTACAATTATATTTGAATTGCGGCGAGAGTCGTGT ACAATGTaaagaaaataagaagaaaaaaaggaatcaCCATCAAGTTCGTT TGGGTCCTGAAATTGGACGTTGGATAACACCATTTAGAAGATTTATCAAA ATTCGGGCACGTATATTTGGACATGGCTTTAGGATGTCCTGGTTCAACGG ATTTCACTTGTCCGCATTGGGACCATACCGTACAATTATATTTGAATTGC GGCGAGAGTCGTGTACAATGTaaagaaaataagaagaaaaaaaggaatca CCATCAAGTTCGTTTGGGTCCTGAAATTGGACGTTGGATAACACCATTTA GAAGACGTATTGGACGTTGGCTGACCGACATTCGACCACTTGCACCTTTA TTCACATCGAAATCGTGCACTTTTACCATGAAGACAGTGCCTTGGGCAAT GCCATGGAAACCATCCTTAAAACTATGGCTGACTGATAAAAAATCTGACG TATTGGACGTTGGCTGACCGACATTCGACCACTTGCACCTTTATTCACAT CGAAATCGTGCACTTTTACCATGAAGACAGTGCCTTGGGCAATGCCATGG AAACCATCCTTAAAACTATGGCTGACTGATAAAAAATCTGgaaATATTGA CCAACCGACTATGTTTGAAGAGCTGTTCAGAGGTGGGACGTTCAACGGCT CGTATAACTTAGATTCGCCGAAAGGGCGCCGTGAGAAAACCATTAACGTC CCTAAGAACGTGACCAAAGCTATGCTGTTTGCAACCATCACGGGCCACGG AAGTGATGATAATAATTGTGCCGAATTTTGTGTGACATCACACCATTTCC AAATTAACGAAAACGATAATGAACGAGTGTTTGATAATGCCGGTACAGCA ACGGGATGCGCGGACCGTGTTTCCGAAGGCTCGGAACCGAATGAACACGG AACGTGGCTTTACGGCCGGAATGGATGGTGTGACGGAGAGAACGTCGGAC CGTGGATCGAAGACGTTACAAAACAAATACGCCCTGGCGAAGAGAACACT ATCAAATATAATGGATTTTTTAATAGTAAAGACCCAGCACCGAAAAGGGA TCCAGGAAATATTATTATGTACTCTTACTTGATTTTTTATACTAAAAGTG GTGGTGGCCAGGCTAGTGATGACACAAAGAATAATCGTTGAgaaATATTG ACCAACCGACTATGTTTGAAGAGCTGTTCAGAGGTGGGACGTTCAACGGC TCGTATAACTTAGATTCGCCGAAAGGGCGCCGTGAGAAAACCATTAACGT CCCTAAGAACGTGACCAAAGCTATGCTGTTTGCAACCATCACGGGCCACG GAAGTGATGATAATAATTGTGCCGAATTTTGTGTGACATCACACCATTTC CAAATTAACGAAAACGATAATGAACGAGTGTTTGATAATGCCGGTACAGC AACGGGATGCGCGGACCGTGTTTCCGAAGGCTCGGAACCGAATGAACACG GAACGTGGCTTTACGGCCGGAATGGATGGTGTGACGGAGAGAACGTCGGA CCGTGGATCGAAGACGTTACAAAACAAATACGCCCTGGCGAAGAGAACAC TATCAAATATAATGGATTTTTTAATAGTAAAGACCCAGCACCGAAAAGGG ATCCAGGAAATATTATTATGTACTCTTACTTGATTTTTTATACTAAAAGT GGTGGTGGCCAGGCTAGTGATGACACAAAGAATAATCGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000104_pilon | genome | sc0000104_pilon:411203..418138 + |
Properties
| Property Name | Value |
| Aaloc | 1498-2046:6388 |
| Aaloc | 1354-1494:5957 |
| Aaloc | 1141-1350:4371 |
| Aaloc | 991-1137:4089 |
| Aaloc | 781-987:3236 |
| Aaloc | 682-780:2475 |
| Aaloc | 493-681:1113 |
| Aaloc | 307-489:647 |
| Aaloc | 1-306:1 |
|