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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000160_pilon:623158..625389+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044549 ID=XLOC_044549|Name=XLOC_044549|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2232bp|location=Sequence derived from alignment at sc0000160_pilon:623158..625389+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGACAATCTTGAAGAAATCTATATTAAACCTGTTGCCCACCGAGA
CAACAAGCGAACATTGTCGGCAACCGAATCTGTTTATCACCACAGTGCGT
TATTGAATCCACCACAGTCTTTTGCAATCTTTGTTGTCATTTTGGAATCT
TCGAATCCTATTCCTCCAGATATGGTTAGGAAGAGCTTGAACGAGGAATC
CAAGAAACATATGTTGTTACGTTCCCGAATAAGAACCAATACGGATGGAT
ATGATGAATTCCAGGAGATTGAAGATTTAGATATGGAAACAGGTCATTGG
ATTGATTTAGAATGTCAAACAAATGATAATATACAGGATTGGAATGTAGC
GTTGAGAGATAATATCAAGAATAAGCCATTTGATTTTGCTGAAGGCCCTG
TATGGAGAGCTCTCTGGATTGAATCAAATCTTACGGAAAATACTGATGAT
GTTGATGGGACGTATTCATACACCCTTGTTTTTATAAGTATGTCATATTA
ACGTATTAACTGGAATAGCTTTTTGACTTTCAAGGGGGTTGGACCATATT
CCATACTGTTAGGAATCAAAGGAGTCACGtacttttgtttaaaaacaccc
ctgtgtcacagacccgtttGGAACCCAGCCCCATACTggatttcgtcccc
ggtgggaaaaaaccctgtaatttcagccccactgggataTTGATTTTGAT
CTTATTCCCTTTAGacattcaaagtttaaaaattgcactccaaaaccatc
cccactggatttgttaaccttggaacaatggaatttctatccccattggg
atttcgataggagtttttatccccatcGAGGAAAAATGTTCCagcggggc
tgtgagacagggttgtttGAAAATTCATGGTTGTCTAAAATGTATTAACA
GAAAGACTATTAACACCAAACCAACCAAAATGTATGTACTGTCATTTGTT
CGACaaaggaaaatgttttgaatgaGATGAGATATATTGAGTAAATTTAG
GAAAGTCCAAAACCTTTTGTCCAAAAGAAAATACTATTTGTTCTAAATGa
taaaaacaccttaaaagtataaattttcaccaatttttttaatagatttg
aaaatttagttttaCACTACCTTTAAGGAAGGGGAAAGGAAAAGATTGTT
CCAGTGTTCATAGatctcaaaaacttttttcattgaCAGGTAGTCATGCT
ATACTGGATGGTTTGTCCATATCTGATTTCGCATTTGCTCAATTCCTACC
TACTCTAAACAATCTGCTGAATGGGGATGAACTAAGCATTAAGTCAattg
accaatcagattcgatACAGCTTACGAAATCGACCACTGAGATTTATTCG
AATCTAAAGGCACCGCAAGAATCATATCAACAATATCCAGTaccattttt
gaaagaaaaagctcTTGGTGTTGGAATCTCCTTGATCTCAATGTTGAATC
TGAAACCTAAACCTCCACCAATGAGGgtctttgaaaacaaaaataacaac
gGTTGTACAGAGTTTCATCAATTTGAGATCGATGAAGAAACAGCATTTAA
TTTTCGCCGTGTTTGTAAAGAAAATTCACTATCCTTCCAAGCTATGTTGA
TGCTGTTGATTGGTAATGCTATGAAAGAATGCGAGAATCATTTTCCGCAC
TTTAAGGCTAATATACACGAGATACGATATCCAGTTGACGTTCGTCGCTT
CAATAAGGCCCTGTCTACATCACCGTTACCGGTAGCAGTTCACGTTCAAT
CTGTGGCGCAGAAAATTCGACCACAACCAACAGAGAATGTAGCAGAGTTT
CTCAAATATGCTCACGAAGTATCAGAAAGTGTTCGTAGTTTTAAGGGACC
AGCTCCAGCCAGTGATCTGATTGACTCTGTAGTGATTCTTCAAAGAAACA
ATTTCTTCCAGAAAGGAATTCAGTATGCACCTCAAGGGATCCTTTTTAGC
AATATTGGCAATTGCGATGGTTTCCAGAAACTACAGTCAACAGATATAGT
AAAGGCCAAGCAATGCTATGCTACTAGTTTAACACATAATACAATTTTCG
CAAGTGCTGCTGCCCTcaacaagaaaatgttttgtgTTTTATCTTATAAC
AGTGAATGGTTAAACGCAGACTTTGCAAAAGTTGTGGAGAAAAATATGAG
ATCTTCAATGAAGACATTAGTGAAAGGCTTATCTGTTATGGCAACTAAAG
GGCGTGGCATATTAAAGGTTTTTGACTTTTGA Coding sequence (CDS) from alignment at sc0000160_pilon:623158..625389+ >XLOC_044549 ID=XLOC_044549|Name=XLOC_044549|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3060bp|location=Sequence derived from alignment at sc0000160_pilon:623158..625389+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGACAATCTTGAAGAAATCTATATTAAACCTGTTGCCCACCGAGA
CAACAAGCGAACATTGTCGGCAACCGAATCTGTTTATCACCACAGTGCGT
TATTGAATCCACCACAGTCTTTTGCAATCTTTGTTGTCATTTTGGAATCT
TCGAATCCTATTCCTCCAGATATGGTTAGGAAGAGCTTGAACGAGGAATC
CAAGAAACATATGTTGTTACGTTCCCGAATAAGAACCAATACGGATGGAT
ATGATGAATTCCAGGAGATTGAAGATTTAGATATGGAAACAGGTCATTGG
ATTGATTTAGAATGTCAAACAAATGATAATATACAGGATTGGAATGTAGC
GTTGAGAGATAATATCAAGAATAAGCCATTTGATTTTGCTGAAGGCCCTG
TATGGAGAGCTCTCTGGATTGAATCAAATCTTACGGAAAATACTGATGAT
GTTGATGGGACGTATTCATACACCCTTGTTTTTATAAATGGCAGACAATC
TTGAAGAAATCTATATTAAACCTGTTGCCCACCGAGACAACAAGCGAACA
TTGTCGGCAACCGAATCTGTTTATCACCACAGTGCGTTATTGAATCCACC
ACAGTCTTTTGCAATCTTTGTTGTCATTTTGGAATCTTCGAATCCTATTC
CTCCAGATATGGTTAGGAAGAGCTTGAACGAGGAATCCAAGAAACATATG
TTGTTACGTTCCCGAATAAGAACCAATACGGATGGATATGATGAATTCCA
GGAGATTGAAGATTTAGATATGGAAACAGGTCATTGGATTGATTTAGAAT
GTCAAACAAATGATAATATACAGGATTGGAATGTAGCGTTGAGAGATAAT
ATCAAGAATAAGCCATTTGATTTTGCTGAAGGCCCTGTATGGAGAGCTCT
CTGGATTGAATCAAATCTTACGGAAAATACTGATGATGTTGATGGGACGT
ATTCATACACCCTTGTTTTTATAAGTAGTCATGCTATACTGGATGGTTTG
TCCATATCTGATTTCGCATTTGCTCAATTCCTACCTACTCTAAACAATCT
GCTGAATGGGGATGAACTAAGCATTAAGTCAattgaccaatcagattcga
tACAGCTTACGAAATCGACCACTGAGATTTATTCGAATCTAAAGGCACCG
CAAGAATCATATCAACAATATCCAGTaccatttttgaaagaaaaagctcT
TGGTGTTGGAATCTCCTTGATCTCAATGTTGAATCTGAAACCTAAACCTC
CACCAATGAGGgtctttgaaaacaaaaataacaacgGTTGTACAGAGTTT
CATCAATTTGAGATCGATGAAGAAACAGCATTTAATTTTCGCCGTGTTTG
TAAAGAAAATTCACTATCCTTCCAAGCTATGTTGATGCTGTTGATTGGTA
ATGCTATGAAAGAATGCGAGAATCATTTTCCGCACTTTAAGGCTAATATA
CACGAGATACGATATCCAGTTGACGTTCGTCGCTTCAATAAGGCCCTGTC
TACATCACCGTTACCGGTAGCAGTTCACGTTCAATCTGTGGCGCAGAAAA
TTCGACCACAACCAACAGAGAATGTAGCAGAGTTTCTCAAATATGCTCAC
GAAGTATCAGAAAGTGTTCGTAGTTTTAAGGGACCAGCTCCAGCCAGTGA
TCTGATTGACTCTGTAGTGATTCTTCAAAGAAACAATTTCTTCCAGAAAG
GAATTCAGTATGCACCTCAAGGGATCCTTTTTAGCAATATTGGCAATTGC
GATGGTTTCCAGAAACTACAGTCAACAGATATAGTAAAGGCCAAGCAATG
CTATGCTACTAGTTTAACACATAATACAATTTTCGCAAGTGCTGCTGCCC
TcaacaagaaaatgttttgtgTTTTATCTTATAACAGTGAATGGTTAAAC
GCAGACTTTGCAAAAGTTGTGGAGAAAAATATGAGATCTTCAATGAAGAC
ATTAGTGAAAGGCTTATCTGTTATGGCAACTAAAGGGCGTGGCATATTAA
AGGTTTTTGACTTTTGAGTAGTCATGCTATACTGGATGGTTTGTCCATAT
CTGATTTCGCATTTGCTCAATTCCTACCTACTCTAAACAATCTGCTGAAT
GGGGATGAACTAAGCATTAAGTCAattgaccaatcagattcgatACAGCT
TACGAAATCGACCACTGAGATTTATTCGAATCTAAAGGCACCGCAAGAAT
CATATCAACAATATCCAGTaccatttttgaaagaaaaagctcTTGGTGTT
GGAATCTCCTTGATCTCAATGTTGAATCTGAAACCTAAACCTCCACCAAT
GAGGgtctttgaaaacaaaaataacaacgGTTGTACAGAGTTTCATCAAT
TTGAGATCGATGAAGAAACAGCATTTAATTTTCGCCGTGTTTGTAAAGAA
AATTCACTATCCTTCCAAGCTATGTTGATGCTGTTGATTGGTAATGCTAT
GAAAGAATGCGAGAATCATTTTCCGCACTTTAAGGCTAATATACACGAGA
TACGATATCCAGTTGACGTTCGTCGCTTCAATAAGGCCCTGTCTACATCA
CCGTTACCGGTAGCAGTTCACGTTCAATCTGTGGCGCAGAAAATTCGACC
ACAACCAACAGAGAATGTAGCAGAGTTTCTCAAATATGCTCACGAAGTAT
CAGAAAGTGTTCGTAGTTTTAAGGGACCAGCTCCAGCCAGTGATCTGATT
GACTCTGTAGTGATTCTTCAAAGAAACAATTTCTTCCAGAAAGGAATTCA
GTATGCACCTCAAGGGATCCTTTTTAGCAATATTGGCAATTGCGATGGTT
TCCAGAAACTACAGTCAACAGATATAGTAAAGGCCAAGCAATGCTATGCT
ACTAGTTTAACACATAATACAATTTTCGCAAGTGCTGCTGCCCTcaacaa
gaaaatgttttgtgTTTTATCTTATAACAGTGAATGGTTAAACGCAGACT
TTGCAAAAGTTGTGGAGAAAAATATGAGATCTTCAATGAAGACATTAGTG
AAAGGCTTATCTGTTATGGCAACTAAAGGGCGTGGCATATTAAAGGTTTT
TGACTTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000160_pilon | genome | sc0000160_pilon:623158..625389 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 490-1530:1192 |
| Aaloc | 1-486:1 |
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