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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000316_pilon:296186..299494+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044484 ID=XLOC_044484|Name=XLOC_044484|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3309bp|location=Sequence derived from alignment at sc0000316_pilon:296186..299494+ (Clytia hemisphaerica_ch_hm2_pilon)
ATAAATTCATCTCATTATCATGACGCATTACGTATATTCAAAGAAATCGA
AACCGTTCGAAAGGACATCCTCGGCGAACGTCACAACGATTACCTCACCA
CAAAACACAACATCGGACACTGTTTAATGAATTTATCTCATCATCATGAC
GCATTACGTATATTCAAAGAAATCGAAACCGTTGAAAAGGACACCCTCGG
TGAACGTCACAACAGTTACCTCTCCACAAAGCACAACATCGGACACTGTT
TAATGAATTTATCTCATCATCAAGAAGCATTACGTATATTCAAAGAAATC
GAAACCGTTCGAAAGGACATCCTCGGCGAACGTCACAACGATTACCTCAC
CACAAAGCACGCCATCGGACACTGTTTAGTGAAGTTATCTCATTATCATG
ACGCATTACGTATATTTAAAGAAATCGAAACCGTTGAAAAGGAAACCCTC
GGTGAACGTCACAACGATTACCTCAGCACAAAGCACAACATCGGACACTG
TTTAATGAATTTATCTCATTATCATGACGCATTACGTATATTCAAAGAAA
TCGAAACCGTTCGAAAGGACATCCTCGGCGAACGTCACAACGATTACCTC
ACCACAAAACTTAACGATTACCTCAGCACAAAGCACAACATCGGACACTG
TTTAATGAATTTATCTCATCATCATGACGCATTACGTATATTCAAAGAAA
TCGAAACCGTTCAAAAGGACACTCTCGGTGAACGTCACAACGATTACCTC
ACCACAAAGCACAACATCGGACACTGTTTAATGAATTTATCTCATCATCA
AGAAGCATTACGTATATTCAAAGAAATCGAAACCGTTCGAAAGGACACCC
TCGGTGAACGTCACAACAATTACCTCGCCACAAAACACAACATCGGACAA
TGTTTAATGGATTTATCTCATTATCATGACGCATTACGTATATTCAAAGA
AATCGAAACCGTTGAAAAGGACACCCTCGGTGAACGTCACAACAGTTACC
TCTCCACAAAGCACGCCATCGGACAATGTTTAGTGAAGTTATCTCATCAT
CAAGAAGCATTACGTATATTCAAAGAAATCGAAACCGTTCGAAAGGAAAC
CCTCGGTGAACGTCACAACAGTTACCTCAGCACAAAGCACGCCATCGGAC
ACTGTTTAGTGAAGTTATCTCATTATCATGACGCATTACGTATATTTAAA
GAAATCGAAACCGTTGAAAAGGAAACCCTCGGTGAACGTCACAACGATTA
CCTCAGCACAAAGCACAACATCGGACACTGTTTAATGAATTTATCTCATT
ATCATGACGCATTACGTATATTCAAAGAAATCGAAACCGTTCGAAAGGAC
ATCCTCGGCGAACGTCACAACGATTACCTCACCACAAAGCACAACATCGG
AAACTGTTTAATGGATTTATCTCATCATCATGACGCATTACGTATATTCA
AAGAAATCGAAACCGTTCAAAAGGACACCCTCGGTGAACGTCACAACAGT
TACCTCACCACAAAGCACAACATCGGACAATGTTTAACGGATTTATCTCA
TCATCATGAAGCATTACGTATATTCAAAGAAATCGAAACCGTTCAAAAGG
ACACTCTCGGTGAACGTCACAACGATTACCTCACCACAAAACACAACATC
GGAAACTGTTTAATGGATTTATCTCATCATCATGACGCATTACGTATATT
TAAAGAAATCGAAACCGTTGAAAAGGAAACCTTCGGTGAACGTCACAACA
GTTACCTCGCGACAAAGCACAACATCGGACGATGTTTAATGAATTTATCT
CATCATCATGACGCATTAcgtatatttaaagaaattgaaGCCGTTAAAAA
GGACACCCTTGGTGAACGTCACAACGATTACCTCACCACAAAACACGGCA
TCGGACAATGTTTAATGAATTTATCTCATTATCATGAAGCATTACGTATA
TTCAAAGAAATCGAAATAGTATGGAATAAAACAATAGGCCAGAGACATGG
GAATTACTTGATTGGCAAAATCTATATCGGAGAATGCTTGAAGAGAATGA
AAGCATTCGACGATGCGTTACAAATTTTCGAATCATCCAAACCAATATTG
TCAGAAGTTTTTGGTGACCATCACGATCGATACTTGAGAAACGATTTCCA
CATCGGTCATGTTCTAACAATGAAAGGACGTTTTGACGATGCATTGAAAA
TTCTTGAATCAACACAAACAAAACAGATCGAAATATTCGACAAATCCCAT
CTGGAAGTTTTAAAAACGACAAGCGTTATTGGACGTTGTTTGGCAGAAAG
AGGACTTTTTGATAAAGCCCATGATACTTTATCACAAACCCTTGAAGATG
GCTTACAGGTGTTGGATAAAGAACATCTAATTATTCTCTCCATCAGAATC
AATTTGGCACACTGCTTGTTTGGtatgaaaaagattgaagaagcaATGAT
TCATTTGACTGAAGTTGAAGAGATATCTTTGCAACGGTTCGGTGATCATC
ATTCGATTTATCGTGAAGCAGTCGAAATGAAAGAACATCACGAACAGAAA
CAGAAGCAAAAAGAAGAAGGTGTAGATGTTTCACCTGGTAAGTTCACACT
TTATATTTACATTTATTTTCCTGAACTTGGGAAGGACGAAACCAAGGaag
taaaagcccgaagggGTAGAAGCAAATCTGCTAGGTTTGATTTAAAGCCG
CTGAATCCTACCTAAGTTGCGCCGGCTTGAGCGGCCCATatggtttttat
acaaatttcagattgaaagtaaaaatttcCGCTAGATTATTATacaactt
gaaaacaaagaaacagcTAAATTCTATCAGTCGTCAAAAATAAGGCACAT
GTTCTAAAGCTTCACCTTTTCGAAGATTTGCTTCATTAgagattttttag
tttttgtcaaGTCAGGATTTGGTGCTAAGTTTCATTTGAACCATATTTTT
GGCAAACCAtctctttaaaattgaaaattgaaaatctctGATTTAAGGGA
TTGATTTTTACGTATGACATTATTTTTATGGATCACACAATGGCTTGGGA
TAAAAGCTTTGAGTTTTAAAATATCTAAAGCTGCTTAAAATATTTCGAGT
GAAAAATGATTTACTAATACTCAAAAAAGAGTTTTGACGTATTATTATTT
TAATCATTCATTAAAtgacaatattttttcaaaagatttttttacttttt
tgacaaaagcttttttcatcctcaacatttttaaaaattgcaatactaat
ttcatttttcgattttatctATAGTTACTGAAAGGATGCAATCAGCAAAG
TTGGAATGA Coding sequence (CDS) from alignment at sc0000316_pilon:296186..299494+ >XLOC_044484 ID=XLOC_044484|Name=XLOC_044484|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4692bp|location=Sequence derived from alignment at sc0000316_pilon:296186..299494+ (Clytia hemisphaerica_ch_hm2_pilon)
ATAAATTCATCTCATTATCATGACGCATTACGTATATTCAAAGAAATCGA
AACCGTTCGAAAGGACATCCTCGGCGAACGTCACAACGATTACCTCACCA
CAAAACACAACATCGGACACTGTTTAATGAATTTATCTCATCATCATGAC
GCATTACGTATATTCAAAGAAATCGAAACCGTTGAAAAGGACACCCTCGG
TGAACGTCACAACAGTTACCTCTCCACAAAGCACAACATCGGACACTGTT
TAATGAATTTATCTCATCATCAAGAAGCATTACGTATATTCAAAGAAATC
GAAACCGTTCGAAAGGACATCCTCGGCGAACGTCACAACGATTACCTCAC
CACAAAGCACGCCATCGGACACTGTTTAGTGAAGTTATCTCATTATCATG
ACGCATTACGTATATTTAAAGAAATCGAAACCGTTGAAAAGGAAACCCTC
GGTGAACGTCACAACGATTACCTCAGCACAAAGCACAACATCGGACACTG
TTTAATGAATTTATCTCATTATCATGACGCATTACGTATATTCAAAGAAA
TCGAAACCGTTCGAAAGGACATCCTCGGCGAACGTCACAACGATTACCTC
ACCACAAAACATAAATTCATCTCATTATCATGACGCATTACGTATATTCA
AAGAAATCGAAACCGTTCGAAAGGACATCCTCGGCGAACGTCACAACGAT
TACCTCACCACAAAACACAACATCGGACACTGTTTAATGAATTTATCTCA
TCATCATGACGCATTACGTATATTCAAAGAAATCGAAACCGTTGAAAAGG
ACACCCTCGGTGAACGTCACAACAGTTACCTCTCCACAAAGCACAACATC
GGACACTGTTTAATGAATTTATCTCATCATCAAGAAGCATTACGTATATT
CAAAGAAATCGAAACCGTTCGAAAGGACATCCTCGGCGAACGTCACAACG
ATTACCTCACCACAAAGCACGCCATCGGACACTGTTTAGTGAAGTTATCT
CATTATCATGACGCATTACGTATATTTAAAGAAATCGAAACCGTTGAAAA
GGAAACCCTCGGTGAACGTCACAACGATTACCTCAGCACAAAGCACAACA
TCGGACACTGTTTAATGAATTTATCTCATTATCATGACGCATTACGTATA
TTCAAAGAAATCGAAACCGTTCGAAAGGACATCCTCGGCGAACGTCACAA
CGATTACCTCACCACAAAACACAACATCGGACAATGTTTAATGGATTTAT
CTCATTATCATGACGCATTACGTATATTCAAAGAAATCGAAACCGTTGAA
AAGGACACCCTCGGTGAACGTCACAACAGTTACCTCTCCACAAAGCACGC
CATCGGACAATGTTTAGTGAAGTTATCTCATCATCAAGAAGCATTACGTA
TATTCAAAGAAATCGAAACCGTTCGAAAGGAAACCCTCGGTGAACGTCAC
AACAGTTACCTCAGCACAAAGCACGCCATCGGACACTGTTTAGTGAAGTT
ATCTCATTATCATGACGCATTACGTATATTTAAAGAAATCGAAACCGTTG
AAAAGGAAACCCTCGGTGAACGTCACAACGATTACCTCAGCACAAAGCAC
AACATCGGACACTGTTTAATGAATTTATCTCATTATCATGACGCATTACG
TATATTCAAAGAAATCGAAACCGTTCGAAAGGACATCCTCGGCGAACGTC
ACAACGATTACCTCACCACAAAGCACAACATCGGAAACTGTTTAATGGAT
TTATCTCATCATCATGACGCATTACGTATATTCAAAGAAATCGAAACCGT
TCAAAAGGACACCCTCGGTGAACGTCACAACAGTTACCTCACCACAAAGC
ACAACATCGGACAATGTTTAACGGATTTATCTCATCATCATGAAGCATTA
CGTATATTCAAAGAAATCGAAACCGTTCAAAAGGACACTCTCGGTGAACG
TCACAACGATTACCTCACCACAAAACACAACATCGGAAACTGTTTAATGG
ATTTATCTCATCATCATGACGCATTACGTATATTTAAAGAAATCGAAACC
GTTGAAAAGGAAACCTTCGGTGAACGTCACAACAGTTACCTCGCGACAAA
GCACAACATCGGACGATGTTTAATGAATTTATCTCATCATCATGACGCAT
TAcgtatatttaaagaaattgaaGCCGTTAAAAAGGACACCCTTGGTGAA
CGTCACAACGATTACCTCACCACAAAACACGGCATCGGACAATGTTTAAT
GAATTTATCTCATTATCATGAAGCATTACGTATATTCAAAGAAATCGAAA
TAGTATGGAATAAAACAATAGGCCAGAGACATGGGAATTACTTGATTGGC
AAAATCTATATCGGAGAATGCTTGAAGAGAATGAAAGCATTCGACGATGC
GTTACAAATTTTCGAATCATCCAAACCAATATTGTCAGAAGTTTTTGGTG
ACCATCACGATCGATACTTGAGAAACGATTTCCACATCGGTCATGTTCTA
ACAATGAAAGGACGTTTTGACGATGCATTGAAAATTCTTGAATCAACACA
AACAAAACAGATCGAAATATTCGACAAATCCCATCTGGAAGTTTTAAAAA
CGACAAGCGTTATTGGACGTTGTTTGGCAGAAAGAGGACTTTTTGATAAA
GCCCATGATACTTTATCACAAACCCTTGAAGATGGCTTACAGGTGTTGGA
TAAAGAACATCTAATTATTCTCTCCATCAGAATCAATTTGGCACACTGCT
TGTTTGGtatgaaaaagattgaagaagcaATGATTCATTTGACTGAAGTT
GAAGAGATATCTTTGCAACGGTTCGGTGATCATCATTCGATTTATCGTGA
AGCAGTCGAAATGAAAGAACATCACGAACAGAAACAGAAGCAAAAAGAAG
AAGGTGTAGATGTTTCACCTGACAACATCGGACAATGTTTAATGGATTTA
TCTCATTATCATGACGCATTACGTATATTCAAAGAAATCGAAACCGTTGA
AAAGGACACCCTCGGTGAACGTCACAACAGTTACCTCTCCACAAAGCACG
CCATCGGACAATGTTTAGTGAAGTTATCTCATCATCAAGAAGCATTACGT
ATATTCAAAGAAATCGAAACCGTTCGAAAGGAAACCCTCGGTGAACGTCA
CAACAGTTACCTCAGCACAAAGCACGCCATCGGACACTGTTTAGTGAAGT
TATCTCATTATCATGACGCATTACGTATATTTAAAGAAATCGAAACCGTT
GAAAAGGAAACCCTCGGTGAACGTCACAACGATTACCTCAGCACAAAGCA
CAACATCGGACACTGTTTAATGAATTTATCTCATTATCATGACGCATTAC
GTATATTCAAAGAAATCGAAACCGTTCGAAAGGACATCCTCGGCGAACGT
CACAACGATTACCTCACCACAAAGCACAACATCGGAAACTGTTTAATGGA
TTTATCTCATCATCATGACGCATTACGTATATTCAAAGAAATCGAAACCG
TTCAAAAGGACACCCTCGGTGAACGTCACAACAGTTACCTCACCACAAAG
CACAACATCGGACAATGTTTAACGGATTTATCTCATCATCATGAAGCATT
ACGTATATTCAAAGAAATCGAAACCGTTCAAAAGGACACTCTCGGTGAAC
GTCACAACGATTACCTCACCACAAAACACAACATCGGAAACTGTTTAATG
GATTTATCTCATCATCATGACGCATTACGTATATTTAAAGAAATCGAAAC
CGTTGAAAAGGAAACCTTCGGTGAACGTCACAACAGTTACCTCGCGACAA
AGCACAACATCGGACGATGTTTAATGAATTTATCTCATCATCATGACGCA
TTAcgtatatttaaagaaattgaaGCCGTTAAAAAGGACACCCTTGGTGA
ACGTCACAACGATTACCTCACCACAAAACACGGCATCGGACAATGTTTAA
TGAATTTATCTCATTATCATGAAGCATTACGTATATTCAAAGAAATCGAA
ATAGTATGGAATAAAACAATAGGCCAGAGACATGGGAATTACTTGATTGG
CAAAATCTATATCGGAGAATGCTTGAAGAGAATGAAAGCATTCGACGATG
CGTTACAAATTTTCGAATCATCCAAACCAATATTGTCAGAAGTTTTTGGT
GACCATCACGATCGATACTTGAGAAACGATTTCCACATCGGTCATGTTCT
AACAATGAAAGGACGTTTTGACGATGCATTGAAAATTCTTGAATCAACAC
AAACAAAACAGATCGAAATATTCGACAAATCCCATCTGGAAGTTTTAAAA
ACGACAAGCGTTATTGGACGTTGTTTGGCAGAAAGAGGACTTTTTGATAA
AGCCCATGATACTTTATCACAAACCCTTGAAGATGGCTTACAGGTGTTGG
ATAAAGAACATCTAATTATTCTCTCCATCAGAATCAATTTGGCACACTGC
TTGTTTGGtatgaaaaagattgaagaagcaATGATTCATTTGACTGAAGT
TGAAGAGATATCTTTGCAACGGTTCGGTGATCATCATTCGATTTATCGTG
AAGCAGTCGAAATGAAAGAACATCACGAACAGAAACAGAAGCAAAAAGAA
GAAGGTGTAGATGTTTCACCTGTTACTGAAAGGATGCAATCAGCAAAGTT
GGAATGATTACTGAAAGGATGCAATCAGCAAAGTTGGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000316_pilon | genome | sc0000316_pilon:296186..299494 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2314-2346:3277 |
| Aaloc | 613-2310:889 |
| Aaloc | 1-609:1 |
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