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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:874463..876718+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044480 ID=XLOC_044480|Name=XLOC_044480|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2256bp|location=Sequence derived from alignment at sc0000108_pilon:874463..876718+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGTTACAGATTGCTTTAGCTGCTATCATTGTCTCGTTCACTGCATT
CTATTTGTACATGAAACATAGATTGTCTTACTGGAAACGCCGGGGAATAC
CGGAAGATAAAGGACATTTCCCCTTCGGTAGCAAACATGCTTGGGATTTT
GTGCAAGGGAAAATGTCATTCACTCAAATGACAAATTTTGCATACGAAAC
ACACCCTGGTGAAAAGGTCGTTGGAACTTATGATATGTTTGGAAGCCCTG
GTCTGGTTATTCGTGATCCTGACATTGCTAAATTAATCTTGGTCAaggat
tttgataatttcatgGAACGTAAACCAGTTCATTATAACATGTATGATTC
TAACACTAAAAATAACCGATATTTCCCATACATGTTGACAGAGCTTCGTG
GCCAGAAATGGAAGAATGTAAGATCGTCATTAACACCTGTTTTCACTAGC
GGCAAACTGAAGAATATGATTCCACTCATACATAAAGTTGCTGATAACTG
TGAAACATACTTAGACAAGAATATTGGTGTTGAATTTGAGGCGAAGGAGT
TGTTAAAAGGGTACGCTTTGGATGTAATCATTTCAACCGGATTTGGTTAC
GAGAATGACACTTTGAATAATCcagaaaatatcttcaaaaagcATGCTGA
TGTGTTGATTGGTAAGACTTTCAGTTGGAAATTGATAGCTGCAATTCTTC
TGTTCATGATCTGCCCAAGGCTTCTCCGGTGGTTGGATTGGGCCATGTTT
GATAAAAACACGGTCGATTTCTTTGCAGCACTCATTGTTAAAACTATCAA
GGTAAGATTTTTCTTAGGCGTGGCGCTTACTTTTAACAGTCGGTACATAG
GTGTAGATACCTTGCAAAATTTATGAacgagagcggtttttacgacactg
taaatattgtctttgttttatcaaaagataatgaatatgtcataaacgtc
tgcattccctcataaattttgcagggtatctcgctacgcctatgtcAGTC
TATCTTAATTGCACTTATTTATGTATTTGACTCTAAATTTGGAAGTGAGA
TTTTTAGATTCTGAATTTCTACACCAATTTTGATCTCGAGGAGGTAAACA
AACCAGTCTTTGTCTTTATTTCACGGAAGgtattttcaaagcttttttca
cGTTCTAATTGAACAAAGTCTTTATTTTGGCTATTCATGTTATTTTACCT
ACCTGAAAACTTCTTTTTACAATCAAGgatcaatcaaaataaaaagctaG
AAACTGAAAATCTGCTTTATATGGCATTTTGATACcttaaacgctttttt
ttataagaaaatctacAGTTTTTCAAGCTAGAGACAATTTAGAGTCCGCA
AAACCTTAACATGTCCctaacttattcttaatatttcgaaTATCGAAGCC
AAatgtttctcataaaaaaacggtTAAAAGTTATGCAAAGAGGTATACGT
CAAAAAGACATCACCTTCACTTAGACTATCAGAAAGGGCTGCCAGcttca
aatgaaattactttgaATTCTCTTTCAGGAGCGCAAAGAGAGTGGACAGA
GAAGAAACGATTTAATAGATGTCTGTGTTGATATTTTGgagaaggaacga
aaagagaatgagaaaagtgtagaagataaagaagaggcgaaaagaagaaa
tgatgaaatggaaaaaataatcATCGCTAATTCATTGATCATGTTTCTTG
CAGGTGAACAGcgaaatgttttatttatttaaggCTGCaataagttttca
aaattgGTTGTAGGAGATTAATTTACACTCCCCTGTGTCACAAACTCGCT
ggaaaatttggcgaaaataattttgttttccgctgggaaaataccctaga
ctttcagccccactggaataTTGACGTTTGATTTCATCCCCTTTCGAGAA
TCAatgcttcaaaaaaattgtactccacTGGATATTTTAACCTTGGATCA
ATATATTATCTCTCCccaaaaaagtttcaccggggctctGGGATAGGGAT
GTCTTTGTATAGCTCAATTAATTCTTTTGGTTACCATTTACAAATAATTT
CATCATTTCATTCAATAGGATTTGATACAGTCTCAAACGCTTCATCACTG
ATGATGTATTTCTTGGCAAAGCATCAAGATTGCCAAGAAAGACTCTACCA
AGAAATTCAAGAAGCTATCGAATCCACCGGATCTACAAACTTCGATTACG
CTACCATTATGAATATGCCTTATATGGAAAAATTCTTCCAAGAAACCTTC
AGAGTG Coding sequence (CDS) from alignment at sc0000108_pilon:874463..876718+ >XLOC_044480 ID=XLOC_044480|Name=XLOC_044480|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2328bp|location=Sequence derived from alignment at sc0000108_pilon:874463..876718+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGTTACAGATTGCTTTAGCTGCTATCATTGTCTCGTTCACTGCATT
CTATTTGTACATGAAACATAGATTGTCTTACTGGAAACGCCGGGGAATAC
CGGAAGATAAAGGACATTTCCCCTTCGGTAGCAAACATGCTTGGGATTTT
GTGCAAGGGAAAATGTCATTCACTCAAATGACAAATTTTGCATACGAAAC
ACACCCTGGTGAAAAGGTCGTTGGAACTTATGATATGTTTGGAAGCCCTG
GTCTGGTTATTCGTGATCCTGACATTGCTAAATTAATCTTGGTCAaggat
tttgataatttcatgGAACGTAAACCAGTTCATTATAACATGTATGATTC
TAACACTAAAAATAACCGATATTTCCCATACATGTTGACAGAGCTTCGTG
GCCAGAAATGGAAGAATGTAAGATCGTCATTAACACCTGTTTTCACTAGC
GGCAAACTGAAGAATATGATTCCACTCATACATAAAGTTGCTGATAACTG
TGAAACATACTTAGACAAGAATATTGGTGTTGAATTTGAGGCGAAGGAGT
TGTTAAAAGGGTACGCTTTGGATGTAATCATTTCAACCGGATTTGGTTAC
GAGAATGACACTTTGAATAATCcagaaaatatcttcaaaaagcATGCTGA
TGTGTTGATTGGTAAGACTTTCAGTTGGAAATTGATAGCTGCAATTCTTC
TGTTCATGATCTGCCCAAGGCTTCTCCGGTGGTTGGATTGGGCCATGTTT
GATAAAAACACGGTCGATTTCTTTGCAGCACTCATTGTTAAAACTATCAA
GATGTGGTTACAGATTGCTTTAGCTGCTATCATTGTCTCGTTCACTGCAT
TCTATTTGTACATGAAACATAGATTGTCTTACTGGAAACGCCGGGGAATA
CCGGAAGATAAAGGACATTTCCCCTTCGGTAGCAAACATGCTTGGGATTT
TGTGCAAGGGAAAATGTCATTCACTCAAATGACAAATTTTGCATACGAAA
CACACCCTGGTGAAAAGGTCGTTGGAACTTATGATATGTTTGGAAGCCCT
GGTCTGGTTATTCGTGATCCTGACATTGCTAAATTAATCTTGGTCAagga
ttttgataatttcatgGAACGTAAACCAGTTCATTATAACATGTATGATT
CTAACACTAAAAATAACCGATATTTCCCATACATGTTGACAGAGCTTCGT
GGCCAGAAATGGAAGAATGTAAGATCGTCATTAACACCTGTTTTCACTAG
CGGCAAACTGAAGAATATGATTCCACTCATACATAAAGTTGCTGATAACT
GTGAAACATACTTAGACAAGAATATTGGTGTTGAATTTGAGGCGAAGGAG
TTGTTAAAAGGGTACGCTTTGGATGTAATCATTTCAACCGGATTTGGTTA
CGAGAATGACACTTTGAATAATCcagaaaatatcttcaaaaagcATGCTG
ATGTGTTGATTGGTAAGACTTTCAGTTGGAAATTGATAGCTGCAATTCTT
CTGTTCATGATCTGCCCAAGGCTTCTCCGGTGGTTGGATTGGGCCATGTT
TGATAAAAACACGGTCGATTTCTTTGCAGCACTCATTGTTAAAACTATCA
AGGAGCGCAAAGAGAGTGGACAGAGAAGAAACGATTTAATAGATGTCTGT
GTTGATATTTTGgagaaggaacgaaaagagaatgagaaaagtgtagaaga
taaagaagaggcgaaaagaagaaatgatgaaatggaaaaaataatcATCG
CTAATTCATTGATCATGTTTCTTGCAGGAGCGCAAAGAGAGTGGACAGAG
AAGAAACGATTTAATAGATGTCTGTGTTGATATTTTGgagaaggaacgaa
aagagaatgagaaaagtgtagaagataaagaagaggcgaaaagaagaaat
gatgaaatggaaaaaataatcATCGCTAATTCATTGATCATGTTTCTTGC
AGGATTTGATACAGTCTCAAACGCTTCATCACTGATGATGTATTTCTTGG
CAAAGCATCAAGATTGCCAAGAAAGACTCTACCAAGAAATTCAAGAAGCT
ATCGAATCCACCGGATCTACAAACTTCGATTACGCTACCATTATGAATAT
GCCTTATATGGAAAAATTCTTCCAAGAAACCTTCAGAGTGGATTTGATAC
AGTCTCAAACGCTTCATCACTGATGATGTATTTCTTGGCAAAGCATCAAG
ATTGCCAAGAAAGACTCTACCAAGAAATTCAAGAAGCTATCGAATCCACC
GGATCTACAAACTTCGATTACGCTACCATTATGAATATGCCTTATATGGA
AAAATTCTTCCAAGAAACCTTCAGAGTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108_pilon | genome | sc0000108_pilon:874463..876718 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 979-1164:2071 |
| Aaloc | 802-975:1529 |
| Aaloc | 1-801:1 |
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