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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000250_pilon:245514..247234+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044381 ID=XLOC_044381|Name=XLOC_044381|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1721bp|location=Sequence derived from alignment at sc0000250_pilon:245514..247234+ (Clytia hemisphaerica_ch_hm2_pilon)
cTTCAGATGTTGTCGCTCCTTTGTTTCACCTCCTTGATTATTTACGGTCA
TTCAGCCACTACAGAACAAAAAGTCAATTATCTTACCAACCATGTCAAAG
CTTTGACACGTCAAGTTATGCttcaacaatttttcgatgagaGTCGTGTC
AGAACTGAAGGTCAGAGTGGTTTGAATTTGATTCGCCAGCGCCAACATGG
ACTTAAAAACTACTTTAGTGAATCACATAGTGGTTGGTCCTCAGCTGCGA
TCCATGACCACGCCAACAATGACCGTACCGTTGGAATGGGTGAATTTGCA
GCTGTCCTTAACGGAGTTGAATTCAAAACAAGACATAACGACTACCGTCT
ATACATGCCTCATCGAACATCAAAGAATCTCAATGCTTGGGAACCAGTAC
CTTTCCCAGACGTACCGCCAGAAGTTTTGAATATCGCAGATGTTGATGAA
CAAGTTGCCGAGATGAGAGAATGGTTCAAAGCTTTCCAAAAACAAGATTA
CTCTGTTCGTGATTATCGGAAATATTTCAAACCTGTTTTATGTTATTTGG
AAGGTGGCTGGAGCCAATCTGGAAAAGACATTGATGAACCTTTCGAATCT
GACCGTCATTTCGTCGACGCAGCATCATGGCAAGAGCTGCATGAAAAGAT
GAGATATGTTGGATATTCTGGTGGAAAAAGCCGAAATGAAAACTTATCCT
TCCTACCaacaaaaatcattaatttgATTAATGATACTGTTCCAAGTTTT
GCTCAATGGAATTATCGCATCATGTGCCATCCTTTGGGGAAAGATATTCC
TTTAAAACGGTTGAGAATCAAAGAGGATCTGGCAGCTCGCATGATGGCCA
ATCGTGATATCCAATCCTCTTCAACTTCAAGAGGAGCACGTTTTGAACTG
AACcataaaaatgaagatcgaTTTTATGAACGTCCAACCAATTGGAGAAA
TTTCCTTGATGAGTTGATGGGAGAAATTCCTGGCAAAGACAACTACCAAG
GTATTTAAGATATGATTTTTAAAACCAAATGTATTTGAAGTTATCTGACG
TATAACGGGTTTCCAAGTTTTctcgaaaaagtaaaaaatacaatgGAGTC
CCCATAACTCGAAACCACCcgggaaaaaaaattgttaaggATAGGTATGG
ATAAGCTTTATAAGGTAAATGAAGGGACGAGACAATAGTTCGGGTTAAGG
AGATATTACAATGataaaggttcgagttaaagagactgtaCTGTACTTTG
ACATAAGACGCCGGCTGATAGCTGTACAACGATATGACTATACCATTGAC
TATCTAATTTAGTAGATACCTAGAATCTTTGATATCCATAGTACCTAGta
gtaaaaaatgttttcaaactatttttttgtaTCTGCTTATTCTTTTAGCT
AAACTTGTTGACGAAGGATTGGAATATCCAGCGCAAAATCTTGATGGAAC
CACATTGAATGCTGGTTACTATCATAGATGGTTCACTGTTGGTAAAGATG
CTATGGGATCAGCAAATCAACATCGAGGATTCAGTGATCCTTACCTATTC
ACCGCCATGAACACACAAGCCAAATCAGCTGGAGTTGACTACAAAAAATG
TATGGGAAACCCaaaaaaaTGCCACATGTTGAAACAGCGATGGTCGTATG
CAATTCCCTTGGAAATCATCTATTTGACACCCCTATATAAATGGAATCCT
TTCAAGTTAAACCACTTCGGA Coding sequence (CDS) from alignment at sc0000250_pilon:245514..247234+ >XLOC_044381 ID=XLOC_044381|Name=XLOC_044381|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2646bp|location=Sequence derived from alignment at sc0000250_pilon:245514..247234+ (Clytia hemisphaerica_ch_hm2_pilon)
cTTCAGATGTTGTCGCTCCTTTGTTTCACCTCCTTGATTATTTACGGTCA
TTCAGCCACTACAGAACAAAAAGTCAATTATCTTACCAACCATGTCAAAG
CTTTGACACGTCAAGTTATGCttcaacaatttttcgatgagaGTCGTGTC
AGAACTGAAGGTCAGAGTGGTTTGAATTTGATTCGCCAGCGCCAACATGG
ACTTAAAAACTACTTTAGTGAATCACATAGTGGTTGGTCCTCAGCTGCGA
TCCATGACCACGCCAACAATGACCGTACCGTTGGAATGGGTGAATTTGCA
GCTGTCCTTAACGGAGTTGAATTCAAAACAAGACATAACGACTACCGTCT
ATACATGCCTCATCGAACATCAAAGAATCTCAATGCTTGGGAACCAGTAC
CTTTCCCAGACGTACCGCCAGAAGTTTTGAATATCGCAGATGTTGATGAA
CAAGTTGCCGAGATGAGAGAATGGTTCAAAGCTTTCCAAAAACAAGATTA
CTCTGTTCGTGATTATCGGAAATATTTCAAACCTGTTTTATGTTATTTGG
AAGGTGGCTGGAGCCAATCTGGAAAAGACATTGATGAACCTTTCGAATCT
GACCGTCATTTCGTCGACGCAGCATCATGGCAAGAGCTGCATGAAAAGAT
GAGATATGTTGGATATTCTGGTGGAAAAAGCCGAAATGAAAACTTATCCT
TCCTACCaacaaaaatcattaatttgATTAATGATACTGTTCCAAGTTTT
GCTCAATGGAATTATCGCATCATGTGCCATCCTTTGGGGAAAGATATTCC
TTTAAAACGGTTGAGAATCAAAGAGGATCTGGCAGCTCGCATGATGGCCA
ATCGTGATATCCAATCCTCTTCAACTTCAAGAGGAGCACGTTTTGAACTG
AACcataaaaatgaagatcgaTTTTATGAACGTCCAACCAATTGGAGAAA
TTTCCTTGATGAGTTGATGGGAGAAATTCCTGGCAAAGACAACTACCAAG
cTTCAGATGTTGTCGCTCCTTTGTTTCACCTCCTTGATTATTTACGGTCA
TTCAGCCACTACAGAACAAAAAGTCAATTATCTTACCAACCATGTCAAAG
CTTTGACACGTCAAGTTATGCttcaacaatttttcgatgagaGTCGTGTC
AGAACTGAAGGTCAGAGTGGTTTGAATTTGATTCGCCAGCGCCAACATGG
ACTTAAAAACTACTTTAGTGAATCACATAGTGGTTGGTCCTCAGCTGCGA
TCCATGACCACGCCAACAATGACCGTACCGTTGGAATGGGTGAATTTGCA
GCTGTCCTTAACGGAGTTGAATTCAAAACAAGACATAACGACTACCGTCT
ATACATGCCTCATCGAACATCAAAGAATCTCAATGCTTGGGAACCAGTAC
CTTTCCCAGACGTACCGCCAGAAGTTTTGAATATCGCAGATGTTGATGAA
CAAGTTGCCGAGATGAGAGAATGGTTCAAAGCTTTCCAAAAACAAGATTA
CTCTGTTCGTGATTATCGGAAATATTTCAAACCTGTTTTATGTTATTTGG
AAGGTGGCTGGAGCCAATCTGGAAAAGACATTGATGAACCTTTCGAATCT
GACCGTCATTTCGTCGACGCAGCATCATGGCAAGAGCTGCATGAAAAGAT
GAGATATGTTGGATATTCTGGTGGAAAAAGCCGAAATGAAAACTTATCCT
TCCTACCaacaaaaatcattaatttgATTAATGATACTGTTCCAAGTTTT
GCTCAATGGAATTATCGCATCATGTGCCATCCTTTGGGGAAAGATATTCC
TTTAAAACGGTTGAGAATCAAAGAGGATCTGGCAGCTCGCATGATGGCCA
ATCGTGATATCCAATCCTCTTCAACTTCAAGAGGAGCACGTTTTGAACTG
AACcataaaaatgaagatcgaTTTTATGAACGTCCAACCAATTGGAGAAA
TTTCCTTGATGAGTTGATGGGAGAAATTCCTGGCAAAGACAACTACCAAG
CTAAACTTGTTGACGAAGGATTGGAATATCCAGCGCAAAATCTTGATGGA
ACCACATTGAATGCTGGTTACTATCATAGATGGTTCACTGTTGGTAAAGA
TGCTATGGGATCAGCAAATCAACATCGAGGATTCAGTGATCCTTACCTAT
TCACCGCCATGAACACACAAGCCAAATCAGCTGGAGTTGACTACAAAAAA
TGTATGGGAAACCCaaaaaaaTGCCACATGTTGAAACAGCGATGGTCGTA
TGCAATTCCCTTGGAAATCATCTATTTGACACCCCTATATAAATGGAATC
CTTTCAAGTTAAACCACTTCGGACTAAACTTGTTGACGAAGGATTGGAAT
ATCCAGCGCAAAATCTTGATGGAACCACATTGAATGCTGGTTACTATCAT
AGATGGTTCACTGTTGGTAAAGATGCTATGGGATCAGCAAATCAACATCG
AGGATTCAGTGATCCTTACCTATTCACCGCCATGAACACACAAGCCAAAT
CAGCTGGAGTTGACTACAAAAAATGTATGGGAAACCCaaaaaaaTGCCAC
ATGTTGAAACAGCGATGGTCGTATGCAATTCCCTTGGAAATCATCTATTT
GACACCCCTATATAAATGGAATCCTTTCAAGTTAAACCACTTCGGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000250_pilon | genome | sc0000250_pilon:245514..247234 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1003-1323:1401 |
| Aaloc | 1-999:1 |
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