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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000250_pilon:489541..493345+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044370 ID=XLOC_044370|Name=XLOC_044370|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3805bp|location=Sequence derived from alignment at sc0000250_pilon:489541..493345+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGAAATGTATAAAAAACCTCCAATAAAAGTAGACATTAAAGTGGT
ATTACTTGGAAGATATTTTTGTGGTAAAACATCACTCATTCAACGATTTA
TTTATGGCACGTTTGAAGATAGATACTCCAATGTAAGTTTATGAGATGAT
TCTTTCATATCATTTATATCAGTGCTCCTTTTTCGGCTTGAACATTATTG
GATATCTTCAATCAAGTTTACTTTCGATATAATCACATCAAGCTTTTGGT
GCAACATTTCTTAGGGATAAAATGTTTCGCTATTTTATTTAATGCTAGAT
AAAGTGTGGTCGCCGTCAAATATTTCGTTATCTATAATGTTTTCTGAGAT
TGATGACTTTTTCATGTTTCATTGATTATTTGATTGTATATTTGCGGAAC
CGTGTTGGATATAAAAGTTTTACGGTTTTTGCTCAATTCCCcatgaattg
tttttgttttcctgtcGTGGATGAATTCTGGGGgtgggggcactcgattt
ctaaacgactgCATGCGCCgccaaaaattgactttcaagatcggaccctt
acagtacagCTCTTGAGTAGTGAAAAGGtacccatacagtgcattttatC
GAACGTACAcctacagtgcatttcgagggtctcgaaaaacctacccttaa
gggcagcACATGCCgtaggtcggaccatatgagtgcccccgggcaatttt
tttatttccatcgACTTTAATAATCAGGATAACTTTATTAAGACCTGTTT
TTTCTTCAGACCATAGGAGCTGCTTTTAGTGGCAAAACTATAACAGTGAA
TGGTAAATCTGTCGAAGTTGCAATCTGGGTATGAGAAATATATTTTCCTC
AATGATAGCTGGTACAACAGTCTTTACCATTGAGCTTTTCTAAATACACA
TGAAAGGGAAAGCCTATCAATTTGAGTAATCTGTTCTAGCCACACTCATT
CGTCGAATCTAAAAGGCCCTTACTAAAAACTTCAATCTAAAGTATGGATT
TCGGAACCCCTCCTTAAAGTGAGATGAACTTTATTTAGAAAAAGTCTTTT
AACAGAATAACGGTGAAATCTGTCAATTTGCGCTCTAACTTAGTCTTAGA
TGTTCTTGTTTCTTTCCTCAGGATACAGTAGGAGATGAAAAATATGAATC
ATTGAGTCGAATGTATTACAGAAACGCAAAAGCTGCTGTCCTCTGTTATG
GTATGGTAATTTTTGGATGACAAACTCTCTCACTCGGAGCATTGTTTTCC
TTGAATCTTTTGGGAGATCAGATCTTTCTGCACAAAAGCAATAATCTTTA
GTTAATCAAGTTAATTTGATTTGTGATAGCTCGGAGATTTTATACTCTTT
ATCATGTGGAGAAGTATTTCCTTAAAACTTCCCCCTTTCTGCAAGAAATT
TTCttaaccccccccctttctgcGATTTTCAAGACATCTCTACCCTCTTT
AGGTGTGTGGGTGTGTGAACTATGTGATTGTTCGCAACACTCCATTTACA
TGAATTGGTTaacaatttttcctcttttaatTAATAGATCTGACAGATTC
AAAGAGTTGGGATCGAGCAAAATTTTGGGTGGATGAAGTCCGCAAAAACG
AAGAGGTTGCAATCTTAACCTAATTTAAAGTTTTAACAACAAAGCTGGCG
CGTATTTTTTCAACTTACGCATAACTTTAGTTAAATCGTAGGCTGGTGTT
TTAATTCTAAATCACTCGTCTATAAAGTTAACGTAACAACTGAAGTTTAG
TATTGAGGATCTAAGATTATTGGATTCTATTATAAAATGGGCAATGCCAT
TTCAAAAActtagaaaatttagaattcaGGTTAATTAGGTGACTTTGTTG
TGTAAATTCgatgaaattatattgtttaaACAACACATTCCCGCAACGTT
TGATTGATTATTTGTATGTTTCCATTTATAGGACTGTAAAATCTATCTAT
GCGGAACTAAACTTGATTTGATCGCCAACCAAGAACGCGCGGTCGACTTT
CGTGATGTTTCAAAATATGCTCAATCAATAGGTGCAAAGGAATTTGAAAC
GTCTAGTAAATCTGGTGAAAATATTGGTATGAACTTCAAGGCTCGAAAAG
TTTTTCCGTAAATTAAGCCTCTAAGAATAATTCTGGGGAAAGATATGCCC
TACTGTTGGTTGTGACTGATTTTCATgcttttggaaagaaaaaaaatgaa
aagaggctaatttttacaaaaatggaaGAAAGCAACAAAAGTTTTCATAC
TACCTATCAAGATTTAGGTGTCCCTTAGAAATTAGGTTTTAGGTTTTAga
atttaggtgtcaaatttcccgcctgtacgcacTTTATTAGGACCtgtaca
tttatttattttgaggaattttcccgcctgtatgtttattccctcctgta
cgtttatttattttgacccaATATCGCCCGATTCATActggaaaaaaaag
tttaatttttgttcAAGTCAGACGTGTAGAAAggccgttaattacattcg
aacgtAATGTGGGAGATTTCGAATATTACACGagtaaattcgaacgtttt
actaTAAATTCGAgcgtttgatttgaaaaattggtagatttttccgtaga
tttttccttgtacgtttattttagcctgtacgtttatttattttagctct
gatttctcgcttgtacgtttattaggcacctgttAGTAGCAAATGGTTTA
GGAataaagtatttttaaaaagaaagtcaGAGAAAGGTGGtgccaaattt
ttcagatttttgctgTAATTTGCTCAGCCCCAGGACTCAACATTGGCCTT
TAAGTATTCCAAGAGGTGGAGGGTATTCCCTgaaattccagaaaattttg
gtCTGCAGCTAATTAAAGGATAATTTTAGGTCTAGTCCCTGCACCTCTGA
ACAGGGGGAGTGGGTCTGGAGCTTCAGCGCAACCTTTTCGCGGAAAACGT
GAAAAGTGTatttaaaattatctgaaataatttcgtatttttttaatgat
ttttcatttttattgatattttcataGATGAAGTGTTTCAAACGATTGTC
AGTGATTACTTAGAACACAATAAGGGTAAGTATGCTCGCTATTCATCGTA
CACCGAACCTACTATTAGGGGGTCAACCTTTAGGATCCGTGGGACGCAAC
CGCATGTGGTTGGTTTCAAAATAAATAGGATTTAGTGAGAATAGTAAATA
AAGACTGCTAACAATTTGGGTAGTTTCTTAAACCTTTGTGATCATACTCT
AACTAATCTCCTTACTActcctttcaattttcaagTAGAGGTTTTAcgca
cccctgtctcgcagcctctgtggaaattttttcctcagtgggctCAGTGG
GATAAAAATTCGTATTGTAATTCCGATGGGGATGGAGATTCTTTTGTTCC
AAGGTTGAAAATTCCAGTGAGCAgggaatttcgaatggggatgaaatcaa
agtcaattttccagtggggcttaAATTCTAAGGTactttcccaccgggga
caaaatttttttccaaattttccagtggggctagggtcccagcgggtctg
tgagacaggggtgtttttacaCTTTCTAGCACAAGAAATAGGCATCCATT
TAAGACTTTAGGCAATTGTAAACAAATCAAACTAGTTCAAAGAAAACTTA
AGGATTTCTCACAGGAAATAtagaaactttttaaatttctttctttagat
ATGCTAGAGGGACAAAATGAGGATATCACAATTCAACTTGCACCAACGAG
TAACGATGGTATACGGAATGCTTTTGCTCGTTTCCAACAAAAATGTTGCA
TGTAG Coding sequence (CDS) from alignment at sc0000250_pilon:489541..493345+ >XLOC_044370 ID=XLOC_044370|Name=XLOC_044370|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1296bp|location=Sequence derived from alignment at sc0000250_pilon:489541..493345+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGAAATGTATAAAAAACCTCCAATAAAAGTAGACATTAAAGTGGT
ATTACTTGGAAGATATTTTTGTGGTAAAACATCACTCATTCAACGATTTA
TTTATGGCACGTTTGAAGATAGATACTCCAATATGAAAGAAATGTATAAA
AAACCTCCAATAAAAGTAGACATTAAAGTGGTATTACTTGGAAGATATTT
TTGTGGTAAAACATCACTCATTCAACGATTTATTTATGGCACGTTTGAAG
ATAGATACTCCAATACCATAGGAGCTGCTTTTAGTGGCAAAACTATAACA
GTGAATGGTAAATCTGTCGAAGTTGCAATCTGGACCATAGGAGCTGCTTT
TAGTGGCAAAACTATAACAGTGAATGGTAAATCTGTCGAAGTTGCAATCT
GGGATACAGTAGGAGATGAAAAATATGAATCATTGAGTCGAATGTATTAC
AGAAACGCAAAAGCTGCTGTCCTCTGTTATGGATACAGTAGGAGATGAAA
AATATGAATCATTGAGTCGAATGTATTACAGAAACGCAAAAGCTGCTGTC
CTCTGTTATGATCTGACAGATTCAAAGAGTTGGGATCGAGCAAAATTTTG
GGTGGATGAAGTCCGCAAAAACGAAGAGATCTGACAGATTCAAAGAGTTG
GGATCGAGCAAAATTTTGGGTGGATGAAGTCCGCAAAAACGAAGAGGACT
GTAAAATCTATCTATGCGGAACTAAACTTGATTTGATCGCCAACCAAGAA
CGCGCGGTCGACTTTCGTGATGTTTCAAAATATGCTCAATCAATAGGTGC
AAAGGAATTTGAAACGTCTAGTAAATCTGGTGAAAATATTGGACTGTAAA
ATCTATCTATGCGGAACTAAACTTGATTTGATCGCCAACCAAGAACGCGC
GGTCGACTTTCGTGATGTTTCAAAATATGCTCAATCAATAGGTGCAAAGG
AATTTGAAACGTCTAGTAAATCTGGTGAAAATATTGATGAAGTGTTTCAA
ACGATTGTCAGTGATTACTTAGAACACAATAAGGATGAAGTGTTTCAAAC
GATTGTCAGTGATTACTTAGAACACAATAAGGatATGCTAGAGGGACAAA
ATGAGGATATCACAATTCAACTTGCACCAACGAGTAACGATGGTATACGG
AATGCTTTTGCTCGTTTCCAACAAAAATGTTGCATGTAGatATGCTAGAG
GGACAAAATGAGGATATCACAATTCAACTTGCACCAACGAGTAACGATGG
TATACGGAATGCTTTTGCTCGTTTCCAACAAAAATGTTGCATGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000250_pilon | genome | sc0000250_pilon:489541..493345 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 544-648:3701 |
| Aaloc | 496-540:3030 |
| Aaloc | 349-492:1932 |
| Aaloc | 283-348:1540 |
| Aaloc | 202-279:1122 |
| Aaloc | 133-201:760 |
| Aaloc | 1-132:1 |
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