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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000239_pilon:328279..334678- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044369 ID=XLOC_044369|Name=XLOC_044369|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6400bp|location=Sequence derived from alignment at sc0000239_pilon:328279..334678- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGATTCTTGTACTTGCTGTGGTACTTTTTGGTGAGTGAAGCCATTT
TTCGGATTTGATTTCTAATACTGTATTCTTCTAATTTTCACAGCTTATTT
CCTATTTCGCCTGAAAAAAGTCATCAAAGTGAATATACAAATTGTAATAT
TTATTCAAATTTGGCGTAAAACCAAACTATTTAGCTCATACTTTAAATGC
ACTTTATTCAAAATCACTTCCATCGAAAAGTATAACTGCAACCTTTTAAG
TCCACAGATAAGGCTGTAGATAGAGTAAACTGTTAAGAATATTTGGTCTT
TTTCAGCTTTTGCGTGGTGCAAGAAGAAGGACGGCAACAACCATGATGAT
ATTTTGGATACCAATCAAAAAATGTTCGAACGAGCTAAAAAAGGTATATA
TGACGTTGTATTGTATATGAGGTGTATAAGATTTTTATAAATTACTCCAA
CCTGAAGATTTAAAAGGTATCAGATTTTTATATCGACCATCAGATCTTTA
AGGCTTTTGATTAGATAATTCTTTTTTCTTTCAGGAACAAGTGGATTCTC
AGGAAAAAAGAAATTGATAAAAGGTAAGCTAAACTAATAGATAATCCAGG
TGTAGTGGTGTGGTGGTCATCGCTCTTAATTCCCGTCTGGAAGGTCCTTG
AACATTCCGCCCACAGCGTGTTTCAACATTCATCTAGCATTTTATGTTCT
CTGTGAACATTTTGAAACAACGTTTTGTGAGTTAAATATTGAAACCGATT
CAATTCAAACCGATTTGGATATTAATCTTCATTATAACATTAATTAAGGC
TAATTTTAAGATTTGAAGGCTTCAACAATTTAGAAAGGTACAGTCCCTGA
ACCATCGAATGGACCATTCCATTATATATCCATAAAGAAGGTGGATGATC
ATTTTCAGGGGGTAACCTGAGAAGAGTTTCCAGGGGGTAAAAGACTGATT
AAGTTAGTCCAAAGTCACTTTCAGGTTTGAAAAAAAGATTTTCCAAGGTT
TTTTTTTTCCTAATTTCGCAATTTTCCACGAATTTCAAAGAATTTTTATG
GACTTGAAAAAGTTCATCTACCCCCTGTATATGGGTTCTTAATGGAACGG
CCCAATGCAGGTCTCCAACAGAATGCAGGTACATTATACTTTCTTTTTTT
TACTGTTCAGAGGAAGATATGCTTGAAGGTGATATTGTTTTAACTCCAAA
GCTAAGAAAATACTTGAACAACCAGAGAGACGGAAAGGCTATCAGCGCCT
TTGATGCTGCTGTCAGCAAAGCATGGCCTAAATCAGGCCCTTATGCTCGC
GTACCGTACACTTTCGCCAGAGGCTTTTGTAAGTCAAATTCATTTCCTTG
GGAATGTTTATATGTTCAATCGAACAAGTTGATTTTTAAATACAGTTGAC
GGTCTCCTATAATTCGATCTTCAAGGGGAATTGGATTTTCATCGAATAAG
GGAGCGTCGTTTATGAGAGTTTCTTGTTGGCGGGGACTTTAAATTTCATC
GAATAAGAGAGCCTATCGAATGGTAGAATGTCGAATTAGAGAGCGTCAAC
TGTAGCTTTGGGCCTTTGATGCTGCTTGAAGAGTACCATACAGTTCGCCC
TCGGAATAATGAATCTGAAGCATGCATGAAAAATGATGGATCTTCATGTA
GCACTCATTCTATTTATTGAAAAAGTGGAAAGTTTTGAGAAAATTATGGA
ATTTCAATGAGTGGAGCCAACGTACCAGGACTAAATAATGAAATGTTTCT
TTCAGCATACAAGTCTGTTGTTGGGCAAGCCATCGCAGAATACAACGCCA
AAACTTGTATTCGTTTTGTACCAAGAAGATCTTCTGACCGAAGCTACGTT
GAATTTATGCACGGGGGAGGGTAGGTGTTGTGTAATACACCTGTTCGACC
GTAGCTGCCCATTGCCGCGCGGGCATTTTTATGCTCGTTTTACCACCCTA
TAAACGTCCCAGTGTTTTTTTTGCACCTATAGACAATAGAAAAAGGTGTA
AAAAAGGATTGGATCGAGTTTAGGGTGATAAAATGGGAAAAAAATGCCTG
CGCGCAATTGGGGGATAAGGGCGAAAAGGTGTATTCCTTTCAAAAGAAAA
TCGTATATTTTTACATCATACCTTTATTACATCGCGGCTAATTTAATTTA
ATTTAATTACAATCGTGGACAAAATATTTGAGACAAAGGGGATATCCCGG
CGAAATTTTAAACAACACAAATGATTTTTCAGCGTCTTAAACTACAATTG
CGGAAAGTAGAGTTTTAACTCTGAGTTTTAGAATCTCAGGATTTAAAAGC
TCAAATTTGCTCGAATAAGGCTTGGAATATAGCCTAGAAGCCACTGAACC
CCTCTAAACTCGAAATATTCAATGAAAGAAAGTGGAAGTGCTAAAATAGC
AATTCTCGCCCGAATTTAAATTCTGAAAAACATTAAAATACACTAAAGTG
TCAATATATTTCGACCATAATTGTAGATCGCAATATTAAAACTTCATTCA
CAAAAAAACCTTGAAGACACTTTTTTCGAAGTAAGTTTTTGAATCGTTTC
TAAAAAATACAGTGGAGTTTCTATAAATCGAGCACGTACGGGAAACTTAA
TTTTTTTGGGAGTTATGTAGATTAGTTTATAAGGCATTGTTTAGTGAAGG
GACAAAAATCATTTTTGGACCTACCTCCGGGTACCCCGGTGGAGGTTCTA
TAAATTAACCCATGTCCGTTCGTTCGTCCGTTCGTTCGTCCGTCCGTCCG
TCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTT
TTGCACAATGATGCAAAATGGCAATGCCCAGAACGTGACGGAGCCCGATT
TTTGAGAAAAAATTTATTTGGGAAAATTTGGGCCAAAAACTACCTAAAAA
TAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGACT
TTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTTAAGAGGT
TTTTCCCGGAAAATTCTTATTCGCCTTAAAAAACGGATTTTCGTATTTTG
GGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTCTCAATGTTGA
CTTGTTATTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCC
TAATATGTGACGGAGCCCGATTTTCGAAGAAAAATATATTTGGCAAATTT
GGGCCAAAAACTGCCTAAAAATAGGGTTTTTGGACTTTGTGCAAAATCCT
GTCATTACTTTTTTCTGATTTTTTTGTACAAAGATGGAGGGCAAGATTCT
CTAAAGAATGGCTGAAGTGATTTTTCCCGGAAAATTCTTATTCGCCTTAA
AAGACGGATTTTCATATTTTGGGGAAATTCTCTTTAACCAAAATAAGAAA
ATATAGCTTTTCTCAATGTTGACTCATTATTTTTTTCTGATTTTTTTGCA
CAATGATGCAAAATGGCAATGCCTAAAATGTGTTGGAGCCTAATTTTCGA
AAAAAAATATATTTGGGCAAATTTGGGCCAAAAACTGCCTAAAAATAGGG
TTTTTTTGACTGTCATTACTTTTTTCTGATTTTTTATACAAAGATGGAGG
GCAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCTGGAAAATTCTTA
TTCGCCTTAAAAGACGGATTTTCGTATTTTGGGGAAATTCCCTTTAATCA
AAATAAGAAAATATAGCTTTTCTCAATGTTGACTCATTATTTTTTTCTGA
TTTTTTGCACAATGATGCAAAATGGCAATGCCCAAAATGTTACGGAGCCA
GATTTTTTTTGGGCAAATTTGGGCCAAAAACAGCTTAAAAGGTTTTTTGG
GCCTGAATAGTTTAAGTGATTTTCGTATTTGGGGAAATTCCTTTTTACCA
TTTTACATCATTCAACACATCAGCTTTATTTTTCCATTCTGAATTTTTGT
ACAATTATTGTCACTTTTTTCTTATTTTCATCTGATGTTAATCATTAGGT
AGGTCCATTCAGCATGTTGCTTGTTCAAATTTAAGAGACATTCGAGTTAT
AGAGGTTTTATTTAAAAAACTCTACTGTATTTAATTTTTAGTTGCTACTC
AATGATTGGTCGTGTCGGAGGAAAACAACAAATTTCATTGGGTAACGGAT
GTGGAACCAAAGGTGTCGCTATTCATGAAATGATGCATGCTTTAGGTGAG
GAAAACTCTCAGTGTCCTTAGTGAATGATTAGTAATGTCTCAAAATAAGT
GATCCCTAGAGAGACTTACATTATTATTTCGAATAAACGCCCTCCTGCGC
CCTCTTCTTTTAACGCCCTCTTCTTTTAACGCCCCCTGCTCGAATAAACA
CCCTTCCATGGTGGAAAACTTTTCAACAAACGCCCCCTCAAATGAACGCC
CTGTGGGAATTGTGTTTGGTGTTAATTCGGAGTAAAACAGTAGGTTATAT
GTTACATACGATCTAGTTTATATGTTCGTACGATCTAGTTTATATGTTCG
TACGATCTAGTTTATATGTTCATACAATCATTATTCTATTTTGATTTTTA
GGATTCTTTCACGAACAGAGCAGAAGAGACCGTGATTCATATATCACAAT
TAATTGGAATAATATTCCAGGACGTAAGTTCACTGAGAGTCCCTTTTGAA
ATCTTCACTGCTTTAAACAGTAATTTCTTTCGTAAAACTATTTTTGTATG
CCAAAGAATATTGTCGGGTTTTAAAAACTTGAGTCTGCTAAAGTGACTTC
TTTTATTTGCACTTTGGGCCCATGTTTGTTATGTTCTTATTTTAAGGTCA
AATTGAGGTCTTACAACTTTAATCTGCTTTCTAAGCCATTTCAGGCTCTA
GATTTTTTCCTTTCTTGATTGAGACTCTTGCTCTATTTTCTTATAAAGAA
AGTAAAGAGTCCTTATAGTTAATAATCCAGCCTTTTACGATTTCAGGTGT
CAGATACAATTTCGAAAAATACAGACATGGACAAGCTCAAACTTTGGGAC
AACCCTATGATAAGAAATCGGTTATGCATTATGGAAAGTAAGTTATAAAT
CATAACATGTTACATTGGTCTTACGTGTCAGGACTACCTGTTACTTCCAC
ATACACTATCGTTGTATAACTCCTATTACGTTTATCTTACGTTGGTCTTA
CACCAGGACTACCTGTTACATCAATATACACTATTGTTGTATAATCCCTT
GAAAGGGGTGCTACCAAATATTTGTATTTCTTTCCTTTGAATGAAAGTTT
TTTATATATTTTTCTGGAAGCCTTTTGTTTCTTTCTATTGTTTTTTACTT
GAACTTGCGTTGAGAAATTAGTTTGTTTTGCTCACTTTTTGATCATGTGA
TTAAATTAAACCAATCCCAAGAGAGAGTACTTGGTTACGTGATCAAAAAC
TGAGCAAATTGATTTTCATCTTTTGATATTAACAAAGAAAAAGCTAACAA
TAAGCTTCCAGACCAGTGTTTTTTATAAAGACTATGATGGAACATAGATG
TTGGTTCGCAACTCTCTATGCATACGACTTTTTGTATTATGAATATGATA
TTATCGTGTGAGTTTGACAGGGAAGTTATCACATGACACATTGAATGTTT
TCCCATAAGGTCTAGTATTAAAATCATTGGCGAGTAGCATGGCTCTTTAT
AGCTTACTTCTTACGATCTTCATTATGTTAAACATCAGGTTTGAAAAGAA
AACTAACGTGCTCACTTCTATTCTTTATTTTCAGCTACGCTTTCTCTACG
AACCGACAAAAAACAATTGTTTCGAAATCTAACCCAAATGAAGTTTTGGG
ACAACGACGAGGCTTAAGTACCATCGATATCCGACAGTTAAAGACGATGT
ACAAATGTGGGGGTGTTAAGCCCATCCCAACTCAAAGACCGCCCACCACT
GGAGGTAAGTTATGTGGATACAGTGATGACAGACTATTTCGCTTTCTCCT
TCAGTCTTTACACAAAAGCTAGGTCGGAAAGAGGGCATAACTGATATTTC
TCAGTCCAACTTTCGTAAATAATAATTATTGATGCTACATGAGAATTCCG
AAAAAACTGTGTGAGATTTTTGACCCGTCCTTAAACCTAAAACTAATAAG
ATTGGAGGAATTTAATCAGAGCCGACCCTTTTTTTTATTCTTTCAGACTG
CAAAGACAAATACAGACTTTGCTCAACATTGGCCGGACAAGGATTCTGTC
GCGTCACTTTTACGTCATGGATGAAAAACAACTGCAAGAAATCGTGCAAG
AAATGTCCAACCAAGCCCTCATTACCGAGATGTAAACCACATAAGAATTC
AAGACATTGTGCAAGTTGGGCACGTTCAGGCTATTGCACCAATCGTCGGT
ATGCAAGTTTCATGGCAGGCCACTGCTCTTCTTGTAAAAAGTGTATTTAG
Coding sequence (CDS) from alignment at sc0000239_pilon:328279..334678- >XLOC_044369 ID=XLOC_044369|Name=XLOC_044369|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2268bp|location=Sequence derived from alignment at sc0000239_pilon:328279..334678- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGATTCTTGTACTTGCTGTGGTACTTTTTGATGAAGATTCTTGTAC
TTGCTGTGGTACTTTTTGCTTTTGCGTGGTGCAAGAAGAAGGACGGCAAC
AACCATGATGATATTTTGGATACCAATCAAAAAATGTTCGAACGAGCTAA
AAAAGCTTTTGCGTGGTGCAAGAAGAAGGACGGCAACAACCATGATGATA
TTTTGGATACCAATCAAAAAATGTTCGAACGAGCTAAAAAAGGAACAAGT
GGATTCTCAGGAAAAAAGAAATTGATAAAAGGAACAAGTGGATTCTCAGG
AAAAAAGAAATTGATAAAAGAGGAAGATATGCTTGAAGGTGATATTGTTT
TAACTCCAAAGCTAAGAAAATACTTGAACAACCAGAGAGACGGAAAGGCT
ATCAGCGCCTTTGATGCTGCTGTCAGCAAAGCATGGCCTAAATCAGGCCC
TTATGCTCGCGTACCGTACACTTTCGCCAGAGGCTTTTAGGAAGATATGC
TTGAAGGTGATATTGTTTTAACTCCAAAGCTAAGAAAATACTTGAACAAC
CAGAGAGACGGAAAGGCTATCAGCGCCTTTGATGCTGCTGTCAGCAAAGC
ATGGCCTAAATCAGGCCCTTATGCTCGCGTACCGTACACTTTCGCCAGAG
GCTTTTCATACAAGTCTGTTGTTGGGCAAGCCATCGCAGAATACAACGCC
AAAACTTGTATTCGTTTTGTACCAAGAAGATCTTCTGACCGAAGCTACGT
TGAATTTATGCACGGGGGAGGCATACAAGTCTGTTGTTGGGCAAGCCATC
GCAGAATACAACGCCAAAACTTGTATTCGTTTTGTACCAAGAAGATCTTC
TGACCGAAGCTACGTTGAATTTATGCACGGGGGAGGTTGCTACTCAATGA
TTGGTCGTGTCGGAGGAAAACAACAAATTTCATTGGGTAACGGATGTGGA
ACCAAAGGTGTCGCTATTCATGAAATGATGCATGCTTTAGTTGCTACTCA
ATGATTGGTCGTGTCGGAGGAAAACAACAAATTTCATTGGGTAACGGATG
TGGAACCAAAGGTGTCGCTATTCATGAAATGATGCATGCTTTAGGATTCT
TTCACGAACAGAGCAGAAGAGACCGTGATTCATATATCACAATTAATTGG
AATAATATTCCAGGACGATTCTTTCACGAACAGAGCAGAAGAGACCGTGA
TTCATATATCACAATTAATTGGAATAATATTCCAGGACGTGTCAGATACA
ATTTCGAAAAATACAGACATGGACAAGCTCAAACTTTGGGACAACCCTAT
GATAAGAAATCGGTTATGCATTATGGAAAGTGTCAGATACAATTTCGAAA
AATACAGACATGGACAAGCTCAAACTTTGGGACAACCCTATGATAAGAAA
TCGGTTATGCATTATGGAAACTACGCTTTCTCTACGAACCGACAAAAAAC
AATTGTTTCGAAATCTAACCCAAATGAAGTTTTGGGACAACGACGAGGCT
TAAGTACCATCGATATCCGACAGTTAAAGACGATGTACAAATGTGGGGGT
GTTAAGCCCATCCCAACTCAAAGACCGCCCACCACTGGAGCTACGCTTTC
TCTACGAACCGACAAAAAACAATTGTTTCGAAATCTAACCCAAATGAAGT
TTTGGGACAACGACGAGGCTTAAGTACCATCGATATCCGACAGTTAAAGA
CGATGTACAAATGTGGGGGTGTTAAGCCCATCCCAACTCAAAGACCGCCC
ACCACTGGAGACTGCAAAGACAAATACAGACTTTGCTCAACATTGGCCGG
ACAAGGATTCTGTCGCGTCACTTTTACGTCATGGATGAAAAACAACTGCA
AGAAATCGTGCAAGAAATGTCCAACCAAGCCCTCATTACCGAGATGTAAA
CCACATAAGAATTCAAGACATTGTGCAAGTTGGGCACGTTCAGGCTATTG
CACCAATCGTCGGTATGCAAGTTTCATGGCAGGCCACTGCTCTTCTTGTA
AAAAGTGTATTTAGACTGCAAAGACAAATACAGACTTTGCTCAACATTGG
CCGGACAAGGATTCTGTCGCGTCACTTTTACGTCATGGATGAAAAACAAC
TGCAAGAAATCGTGCAAGAAATGTCCAACCAAGCCCTCATTACCGAGATG
TAAACCACATAAGAATTCAAGACATTGTGCAAGTTGGGCACGTTCAGGCT
ATTGCACCAATCGTCGGTATGCAAGTTTCATGGCAGGCCACTGCTCTTCT
TGTAAAAAGTGTATTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000239_pilon | genome | sc0000239_pilon:328279..334678 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 883-1134:253 |
| Aaloc | 712-879:666 |
| Aaloc | 622-708:1453 |
| Aaloc | 550-618:1848 |
| Aaloc | 445-546:2309 |
| Aaloc | 331-441:4644 |
| Aaloc | 163-327:5239 |
| Aaloc | 124-159:5865 |
| Aaloc | 37-120:6093 |
| Aaloc | 1-33:6401 |
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