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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000239_pilon:163967..166940- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044364 ID=XLOC_044364|Name=XLOC_044364|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2974bp|location=Sequence derived from alignment at sc0000239_pilon:163967..166940- (Clytia hemisphaerica_ch_hm2_pilon) ATGTCATTCTTGACAGCAAATCCTACTGAAAACAACCATCATAAAAGCAG
AGACGAAGAAATGAGAACGTTATTCCATTCACTGAATCACGATATTCTAC
GACAGCAAATCTACGATCCACCGACACCGCCTCTTACGCCTGAATCACCT
CTTCATACATCAACCAATCATTTGCCATCTTTAAGAAGTCCTACATCCAG
TGAACCAACATCAACTTTCATGCCGCGTTACACGAGATCACAATCATACA
CGGTGGACGCCCATCCTCGCTACACGCATACATCACAGCACACTTCGTGT
AAATGCTGCCCTCGTCCCTACACTAACGCCCACCAACCACGTGACTATTA
CCGACGCCCTTCAACTCATCTTTATCCTTCATCATACAAGCACCATTACA
CGCCTTCAACAACAGATATCGCGCCATCGCATCCCGCCTTCTCACCCACA
ACAACCGCCACGAATTTAAAACGAAGATTCGAGGACGAAGATTGTTTCCC
TCCTGCCAAGAAAATGAAACTGATAAACGAAGACGGCGACAATGGCAAAG
ATAACCCGCAAAAACATAACAGAAATGAAAAAGGACAACTTTTGAATACT
CGTAAAATCGCATGTCAAGTTCAAGGATTACTCAGTCTTCCTGGAGCTCG
TGAACCAAAGTAAGAATTGTTCTTTTTTTTTTCATTAAATGTTAACTATG
AAAAGTATAGCGCGCATAGGCTCGATACAAAACAAGGACGCAACCGAAAA
ACTTTTATAGTCTAGAATTCAGTAAGTATCTGTGTCACTGAATATACATC
GCCGAATTTTTTATCAGACCTGGCTAGTCTGGAAAAGTTAGTCTAGTCTA
TATTTTTTACCAGTTTTTCTCAAGAATTCGTCAAGTGCGACATCCTTTGT
CCAGTTTTGTCTCGCCATTTTCGTTGCGGCTAGACTAACCACAAAATCTC
ATTTCGATACTGAAAAGTCATGTTCCTCTTTTAATACCACGACCGCAACA
ACAATCAAGACATGATCTTTGGGACAGAAACATAACAAAAATGCCTCTTA
CAATATCTTGTCTAGAATTTTTGTGTAAGTAGCTTGTTTTCTGAGGGTTT
CTTAAGGCTGTCTATTGAACTTTGTCAATCATTTAAGTCACGCATCGATT
TGACCGCTAGTGACTGGCTGGATTTATTTCAAGTGTTTTTCTTACTTTAT
ATAAAAGTGTCCGCCACAGTCTTACAAAACTTGTTGAAAGTTCACACACA
TGATGCTATGAGAATCTTAATGTCTAGACTAGAGTGTAGCAGTTATACAT
TGACGTCAAGGCTAATTTAATTTTAAAAAAGCAAGATTTTTTTGCGCTCT
CTAAATTTTCCTGACTAACGAGTGTAAATGGCTTTGAAATTCTCCGCACG
CTATTTTCTCCATGTTTATACTTCGATATTTTCAACAAATAAAACGTTGA
TCAATTTCTTGGATAATTTCTTATGAATGGAATCTTTTAAATACTTAACT
GTGTCATCCTATTAAAGGGTATCATTTAAGGTCGTCATCCCATTTGCTAA
CACAGCATTTTTGAATAAAGAAATCCCGCGCCGCGCCGCGCGTGCACAAA
TTTTGAGAACTACTCTCCGCTTTGAAAGCATAGCATAAAAATATCTTTAA
CTGCTTTTCTAAAGGTGTATCAAAATGGACTGGGTCGGAAGTTATCAGTT
TCAATTTCATCGAATGTCTAGAGGTTGCTGCATTTGCCCCTGACAAACTC
GGTTCTACAACTCTTTTATGATGGGATGGGATGTTGAGTCACATTCTGTA
TATCATTACATAATGTTATGCAACATATTTTGTATTTTAAAACTAATCCC
TGGATTTTTTAAATTGGTGAGAACATTGTAAGTCCCTTCAGCCTTTCGAA
GTCGAGGAAGCTTCTTTTCCCTTTATTTTTTATTACATCTTCATTACATA
ATTTGTCATGCTTTTATTTTTAGGTTCGATATTTCACAGAGTGAGCTACA
GCGACGCGTTAATGAACCAGAATGCCTCACCAAAGTCGATATGATTTCTT
ACGTACGTTTAGCCAAAAACACGGCACGGAATTTACTCGACCATAACGGG
ATCCGTACCAATCAACATAATAAACGATCAGCGCATACCGTTCTATCGCG
CATGTGCGAATCAGAATGCCAAGTTTTGGCACATGGTATCAATGATATCA
ATATGAAATATTTCCCCAGACATTGGTTCGCCAAGAAATCCGTGCAAGAG
ATCTTATTGGCTGAAGAATCGTTAGAAAATCCTCTATCACCAAGACAACG
ACAAATGCTTTTACGTGAACGAATCGAACAAACGAAAAACGCTAGGTGAG
TCTTATTATCTTATCAGACCTGCTTAGAATCAAATGGAAATTTTGTTTCT
TTTTACTCAAACCTTAATTAATTCGAATCTTTCTTTGATTTTAACCAAAT
CACTGGTCCCATTGTGTGAAATACGCTGAAATACGAAATTAAAGTCTAAT
TTCAAGTCTTATCTAATTCGAAGACAAATTTAGTCCCTTTGACGTCAAAC
TAGAGAGATAGTCAATCTGTACTGTTAAAACTCTGAAATCCTCATAAAAA
AGATGTCTAAAAAGTTTGTCAGTTTTTCTACCGACTGCTTATCCATTTTT
GGCAAGGTATCTTGTTGTTTGCTGCAATTTTATTCTAAGGAGGCTCTCTT
GGAGGTCGAGTTAGAGAGAGTCGAATGAACTTTGAGATCTGAAATCATAA
TAAAGATAATTAAGATAAATATCATTACCGTTTTTTACTTTCATTTTTCT
AGGTGGATGTTTTTGGATTTCATCAAAGGCCTCGAACGACGTGCTCAAGA
TGATGAAATGAAAACATTCAATTTGATGTCGCATACTTTTGGTGTTTCCA
ACTTGATCAATCATAATTTATTCATGTTTCATTTAATGGAAGAAGAACTT
AAAGTTTTGCAAAGTTATTTGTGA Coding sequence (CDS) from alignment at sc0000239_pilon:163967..166940- >XLOC_044364 ID=XLOC_044364|Name=XLOC_044364|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2406bp|location=Sequence derived from alignment at sc0000239_pilon:163967..166940- (Clytia hemisphaerica_ch_hm2_pilon) ATGTCATTCTTGACAGCAAATCCTACTGAAAACAACCATCATAAAAGCAG AGACGAAGAAATGAGAACGTTATTCCATTCACTGAATCACGATATTCTAC GACAGCAAATCTACGATCCACCGACACCGCCTCTTACGCCTGAATCACCT CTTCATACATCAACCAATCATTTGCCATCTTTAAGAAGTCCTACATCCAG TGAACCAACATCAACTTTCATGCCGCGTTACACGAGATCACAATCATACA CGGTGGACGCCCATCCTCGCTACACGCATACATCACAGCACACTTCGTGT AAATGCTGCCCTCGTCCCTACACTAACGCCCACCAACCACGTGACTATTA CCGACGCCCTTCAACTCATCTTTATCCTTCATCATACAAGCACCATTACA CGCCTTCAACAACAGATATCGCGCCATCGCATCCCGCCTTCTCACCCACA ACAACCGCCACGAATTTAAAACGAAGATTCGAGGACGAAGATTGTTTCCC TCCTGCCAAGAAAATGAAACTGATAAACGAAGACGGCGACAATGGCAAAG ATAACCCGCAAAAACATAACAGAAATGAAAAAGGACAACTTTTGAATACT CGTAAAATCGCATGTCAAGTTCAAGGATTACTCAGTCTTCCTGGAGCTCG TGAACCAAAATGTCATTCTTGACAGCAAATCCTACTGAAAACAACCATCA TAAAAGCAGAGACGAAGAAATGAGAACGTTATTCCATTCACTGAATCACG ATATTCTACGACAGCAAATCTACGATCCACCGACACCGCCTCTTACGCCT GAATCACCTCTTCATACATCAACCAATCATTTGCCATCTTTAAGAAGTCC TACATCCAGTGAACCAACATCAACTTTCATGCCGCGTTACACGAGATCAC AATCATACACGGTGGACGCCCATCCTCGCTACACGCATACATCACAGCAC ACTTCGTGTAAATGCTGCCCTCGTCCCTACACTAACGCCCACCAACCACG TGACTATTACCGACGCCCTTCAACTCATCTTTATCCTTCATCATACAAGC ACCATTACACGCCTTCAACAACAGATATCGCGCCATCGCATCCCGCCTTC TCACCCACAACAACCGCCACGAATTTAAAACGAAGATTCGAGGACGAAGA TTGTTTCCCTCCTGCCAAGAAAATGAAACTGATAAACGAAGACGGCGACA ATGGCAAAGATAACCCGCAAAAACATAACAGAAATGAAAAAGGACAACTT TTGAATACTCGTAAAATCGCATGTCAAGTTCAAGGATTACTCAGTCTTCC TGGAGCTCGTGAACCAAAGTTCGATATTTCACAGAGTGAGCTACAGCGAC GCGTTAATGAACCAGAATGCCTCACCAAAGTCGATATGATTTCTTACGTA CGTTTAGCCAAAAACACGGCACGGAATTTACTCGACCATAACGGGATCCG TACCAATCAACATAATAAACGATCAGCGCATACCGTTCTATCGCGCATGT GCGAATCAGAATGCCAAGTTTTGGCACATGGTATCAATGATATCAATATG AAATATTTCCCCAGACATTGGTTCGCCAAGAAATCCGTGCAAGAGATCTT ATTGGCTGAAGAATCGTTAGAAAATCCTCTATCACCAAGACAACGACAAA TGCTTTTACGTGAACGAATCGAACAAACGAAAAACGCTAGGTTCGATATT TCACAGAGTGAGCTACAGCGACGCGTTAATGAACCAGAATGCCTCACCAA AGTCGATATGATTTCTTACGTACGTTTAGCCAAAAACACGGCACGGAATT TACTCGACCATAACGGGATCCGTACCAATCAACATAATAAACGATCAGCG CATACCGTTCTATCGCGCATGTGCGAATCAGAATGCCAAGTTTTGGCACA TGGTATCAATGATATCAATATGAAATATTTCCCCAGACATTGGTTCGCCA AGAAATCCGTGCAAGAGATCTTATTGGCTGAAGAATCGTTAGAAAATCCT CTATCACCAAGACAACGACAAATGCTTTTACGTGAACGAATCGAACAAAC GAAAAACGCTAGGTGGATGTTTTTGGATTTCATCAAAGGCCTCGAACGAC GTGCTCAAGATGATGAAATGAAAACATTCAATTTGATGTCGCATACTTTT GGTGTTTCCAACTTGATCAATCATAATTTATTCATGTTTCATTTAATGGA AGAAGAACTTAAAGTTTTGCAAAGTTATTTGTGAGTGGATGTTTTTGGAT TTCATCAAAGGCCTCGAACGACGTGCTCAAGATGATGAAATGAAAACATT CAATTTGATGTCGCATACTTTTGGTGTTTCCAACTTGATCAATCATAATT TATTCATGTTTCATTTAATGGAAGAAGAACTTAAAGTTTTGCAAAGTTAT TTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000239_pilon | genome | sc0000239_pilon:163967..166940 - |
Properties
| Property Name | Value |
| Aaloc | 1033-1203:172 |
| Aaloc | 661-1029:1001 |
| Aaloc | 1-657:2975 |
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