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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000020_pilon:595813..600348+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044357 ID=XLOC_044357|Name=XLOC_044357|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4536bp|location=Sequence derived from alignment at sc0000020_pilon:595813..600348+ (Clytia hemisphaerica_ch_hm2_pilon)
AGATGCACTGGCATATGCAAGTACAAATATTCCTTTGGTACTTCATTTTT
CTACCTTACTTCACTGCTCAATGATGTTTTATCGATTGTATTTATTCCCT
TTTATTTACTTCCTTTTAATATCTTatataatttagaaaattacaaaaca
aaaatggtgaaGCTTTTTGCTATTGAACTATTTTACAAATCAGGAAAAGT
CAAGGAGTTGAAATCAGCTCATGATCTGCAATCATTTGGATATTTTCAAA
GAAGCAGGTAGAAAGTcgtagtttttttcaaaaatattggggTTTCTCAA
AGCAAtggtaaaaaagtaaaattttatgtTCGTTTTTAtatcatagcgtc
agcctgggtttaggtcccactctcaggcaaaaattaggtccccccaaaga
tttatgaattttttgtttgcccCCAGGACCtttgaccctagacactttca
aaaaattgttccagtaaaaaagggtattccaatgtaaattgcgttcagtt
ctaagtttaagataaaatattttacacactttttattaaaatattgcGCG
GCaggcgaaaattttccagattcacgtgctgaattattttagccctcacg
ttaagtgatgagattttagctcccccaaATTACATAGGTCcacccaaaaa
agtggtgtacttccagccccctccttttttgggaaaacttTTGGGTGTAc
ccccccccAACTAGCAGGGGGGCTGACGCTCTGTATATGTTCACCTCTTT
TGCATTCATTCATTCTTAAAagatatttctattttttttcatccCCCTAC
CAGTGTACGAGAATTCATGGATTTTACTGGCAAAATTATTGTTGAAAGAA
CATCAGCTGGACAAAGAGCTTCAGTTTCAGAACAAGGTAAACTATACAAT
TGTGTACCCttttaaggttttaaattttttaagatttttagcttttttaa
gaaaatgaggGCTTCTAATATTTAGTTATCACAAGAAACTATATTGAAAG
CAATTCTCATTCAAAGGTAAAAAGTTTAGGCAATGCGCCCCAAATTTCTA
AGTTTCTTTAACTTAAGAACTGAGATTCTTCGCTTTCAAAAGGTTACCAA
ACTCATTTTGCTGGGTCTTTACATTGAGTGGCTTTTAAGAAAGTTTGGTA
TCCCTCTTTTATACTTAAAGCGTTATTTTCTAACCCAGATTAAATGATAA
AAGGTCAGACTTTTGGGAAAGGGTTGCATTTTGCAGTAACAGGGTCAGTC
ATAAGGAGTGATTGATAAATTCTTGTTTCTTGTATGTTTCAGAATACTTG
TGTCATGTGTTTGTCGGAGGAGATGGTTTAAGTGGCGTGGCTATCACAGA
TAAAGAATACAATCAAAGAGTGGCATTCAATATGttaaataaagtataca
taaTTCGCTAAATTTTGGAGATAATAATCCGCATTTCTGTATATTGTGAG
GTATGAGATTCGAAGATAAGACATTTCATTTACAGTATTTTCAGAAATAt
tagtttttttgtttggactttcgaattctttttttacagaatACAGTTTA
CAATTATTTCACTGATAATGctctttttcctaaattttcagattttagaa
gaattcaaaaaacaagtaCCTTCTGCACAATATATGAACCAAGACCCAAG
GTTTGAATTCTGTACATTCTAACAAGTTATATTTCAACGAGTGAATATAC
TAGACTATTCCTTATATTCGTTTACCTGTAACATCAAATTCTCTTGATTT
TCTCACTCGTCAACGTTCAATGGCATAAAAATCTATTATTATTTCTATTT
GTTTCTTTAGCACGTATAATTTCACACTATGCCAATCATATCTCGAAAAA
TATCAGGTGAGGTTATTTTTCTATTGAGCTGAATACCATGtcctttttcg
aaaaaatcgtTATTGAATTTGGACTGATGGATTCCATTGTCGATTGTCGA
CTGGTTTACATTATTCGATTGTATAAATTCGATTGAGATAAATTTCTGTT
GAGCTTATAAAGTACCtgactttttctgaaatttctttaATTGGAGATTT
AACACAAGAAAATTATTTCCGCTTTTGCCTATGatattttatgcaaaaaa
tcaattttgaaagatcAATGGTTTTCCTGGAATCCTCATTATTttttatg
gaaacttttttctCAGAATCCAAGCGAAGCAGATCCAATGATGAAAGTAC
AAAGTGAACTGGACGACACAAAAATTATCATGGTATGGTTCACTTCACTA
tggtttaaaaaagattttatctttacataagtgtttccgtttcatatcag
acacatatttcatatcaggacagtgtcttgctattgttatattatgctga
tatataagggaaaaaatgtttttctttttctctttctgaccaatcttgct
ccacatacgtgtcaatccaatgtgaaaaagcttgtgaattaaaatcgATG
AGTGatcccaatcaaaaataaacacctgttttgtgacatttttactgtca
gccACTAAATTGACCATAACTTGGAGAAATTATGTGGCTTACACTTAGGA
TTGTTTGATGGTTAAGCTGAGGAAATTAGCTATCCATTGCATAAAGGGCG
AATTTTTGTGGCTTACTTAAAGGGGAGTTGCAAGCAAATGAAGTGTGGGC
AAAAAATGTGGCTTACTGGTCATGTGGCTTACCCTACCAAGAAATTTTAA
AGGCTCAGTTCTCAATAATGGAAACAGTCAGAAATATACTTTCTTTGCCA
GCAAAGGGCTAATTTTTTCATTAGCTGCACTGATTTGTGGCTTACAGTTT
GTTAAGTTGGCAAAAATGTGGTTTACACAAGGGAAATAGAGGTGAATAGG
TGAATATGTAAAATATAGGTGAAATTTTATGTCtcacattttttaagttt
ttggcaCTCAATCATTAAAGTATAACACCAGTAGGtgcaaaaaattacaa
aaattttgttgtAAGTACAATTTTGTGGTCACATTAAAAATTATGGGAAA
GTAAGCCACCAAAAAGTACATTTAAAAGCTAGAAAGTAGCacatttaaca
tttttaattcAACCTTTCCTCTGTCAAGGTAATAAAGTCCCATTCTAAGA
TCTTTTATCTAATTTGTGTGGCTtacatttctaaaaaagatacaaatttt
gatttgaagccacatttttagCCCAATTAACGGAAAAAATTATTCATAAT
GTCTTAGTATTTCCCACAacattgtaaaatttcaagactTATCGATTAAG
ACTTCATCATCTAtgacaaaaagttgttttttgggaatttttcaaaatgt
cacactattttttatTGGGATCTAGTAAGCAAactatatcactcttattt
aaaaacaaaacctttaaggggTAGGGTAGTCACCAACTGTGACAGGTAGC
ACGTGATTCTTTGTCCATGACTTTCCAAAGGTATATTGTAGGAAATCTCT
TTCTCCCTTGAAATTTGATCTTTACTTTACCTTTCCTTATTTTTGTTTGC
TGAGGTAGAGTTCTTTAATCGGGTGAAAGTGCCATCCCATAATTCCTTGG
TAAGATTGGCGAAGGATTTTTAACCCCACGATCTGCTCTTAAGACTATGA
GCGCTTTTGTATAATTTGAAAGCGATTGCTTTGTTTGTCCTGTTGTCGCT
TTTTGTAAcatatttacatttttcattgattttaagTACGAAACGATAGA
AAAAGTGTTACAGAGAGGGGAGAAGATTGACGATTTGGTTGCAAAATCTG
AAGGACTCAGTATGGGCTCCAAGACATTCTACAAAACGGTAATACATACT
GAACTCCATTTTAATCTCCGTAATTCAAGATGGTAATATAATAAATGCGA
TTTCAAAATCTAGCTTTTAGCGATACTCTTATTCCTTGCTATAATATTTT
TTCCCCAACGAAGAGCGGTCCTTAATTTATGTTACAAATATTTTGTAAGt
gttgttcatataaaaaaagtccCTTGTTGATTACACCAagtagaaaaaat
ttttaagtttttttaaacacttCTAATAGTTTAAACATACTAGAATAACG
GCTAGTATccataaagatttcaaaagcgGGATATATCGTATCCGATAACG
TAACCGCTGCCTAACCTCGACCGGGCaaagaaaaattcttcaaagatTCG
AGTTAAGACCTTTAGacctcaatttaaaaaaaattacttttttaatgaat
tttgagaaaatttactCATTCTATCTAAAATTTCATTAATACAATTTGAG
AAGTCAAAAATTATTACCCCCAAATATGACCAGATCTTCAAACAAGAAGA
GGTTTGAAAGTGTATATCTGTTTCCGTACCCCCGTCTTCAAAGCAGAGAA
AGGCTAGGATTGCCGATCCCAGCTAAAACCCTATACAGACGGCGCTATAT
CATTTAGGTACGCTTTCAGATACGATATAACCTTCTCTTTTCAAAAGGCA
AACTTAAGATAACTTAGAAACAAATTTATCATTgggtttatttcattttt
caggcaaaaaagacAAACGCTTGTTGCAGCTGGTAG Coding sequence (CDS) from alignment at sc0000020_pilon:595813..600348+ >XLOC_044357 ID=XLOC_044357|Name=XLOC_044357|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1494bp|location=Sequence derived from alignment at sc0000020_pilon:595813..600348+ (Clytia hemisphaerica_ch_hm2_pilon)
AGATGCACTGGCATATGCAAGTACAAATATTCCTTTGGTACTTCATTTTT
CTACCTTACTTCACTGCTCAATGATGTTTTATCGATTGTATTTATTCCCT
TTTATTTACTTCCTTTTAATATCTTatataatttagaaaattacaaaaca
aaaatggtgaaGCTTTTTGCTATTGAACTATTTTACAAATCAGGAAAAGT
CAAGGAGTTGAAATCAGCTCATGATCTGCAATCATTTGGATATTTTCAAA
GAAGCAGAGATGCACTGGCATATGCAAGTACAAATATTCCTTTGGTACTT
CATTTTTCTACCTTACTTCACTGCTCAATGATGTTTTATCGATTGTATTT
ATTCCCTTTTATTTACTTCCTTTTAATATCTTatataatttagaaaatta
caaaacaaaaatggtgaaGCTTTTTGCTATTGAACTATTTTACAAATCAG
GAAAAGTCAAGGAGTTGAAATCAGCTCATGATCTGCAATCATTTGGATAT
TTTCAAAGAAGCAGTGTACGAGAATTCATGGATTTTACTGGCAAAATTAT
TGTTGAAAGAACATCAGCTGGACAAAGAGCTTCAGTTTCAGAACAAGTGT
ACGAGAATTCATGGATTTTACTGGCAAAATTATTGTTGAAAGAACATCAG
CTGGACAAAGAGCTTCAGTTTCAGAACAAGAATACTTGTGTCATGTGTTT
GTCGGAGGAGATGGTTTAAGTGGCGTGGCTATCACAGATAAAGAATACAA
TCAAAGAGTGGCATTCAATATGttaaataaaAATACTTGTGTCATGTGTT
TGTCGGAGGAGATGGTTTAAGTGGCGTGGCTATCACAGATAAAGAATACA
ATCAAAGAGTGGCATTCAATATGttaaataaaattttagaagaattcaaa
aaacaagtaCCTTCTGCACAATATATGAACCAAGACCCAAGattttagaa
gaattcaaaaaacaagtaCCTTCTGCACAATATATGAACCAAGACCCAAG
CACGTATAATTTCACACTATGCCAATCATATCTCGAAAAATATCAGCACG
TATAATTTCACACTATGCCAATCATATCTCGAAAAATATCAGAATCCAAG
CGAAGCAGATCCAATGATGAAAGTACAAAGTGAACTGGACGACACAAAAA
TTATCATGAATCCAAGCGAAGCAGATCCAATGATGAAAGTACAAAGTGAA
CTGGACGACACAAAAATTATCATGTACGAAACGATAGAAAAAGTGTTACA
GAGAGGGGAGAAGATTGACGATTTGGTTGCAAAATCTGAAGGACTCAGTA
TGGGCTCCAAGACATTCTACAAAACGTACGAAACGATAGAAAAAGTGTTA
CAGAGAGGGGAGAAGATTGACGATTTGGTTGCAAAATCTGAAGGACTCAG
TATGGGCTCCAAGACATTCTACAAAACGgcaaaaaagacAAACGCTTGTT
GCAGCTGGTAGgcaaaaaagacAAACGCTTGTTGCAGCTGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020_pilon | genome | sc0000020_pilon:595813..600348 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 715-747:4504 |
| Aaloc | 613-714:3687 |
| Aaloc | 547-612:2167 |
| Aaloc | 502-546:1812 |
| Aaloc | 442-498:1592 |
| Aaloc | 343-441:1295 |
| Aaloc | 259-339:805 |
| Aaloc | 1-255:1 |
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