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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000020_pilon:703517..707928+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044353 ID=XLOC_044353|Name=XLOC_044353|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4412bp|location=Sequence derived from alignment at sc0000020_pilon:703517..707928+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAATGAGTTTTTCACACACAAGATGCATCTTTATCTGAAGAGTGG
AGAAAGTGAAAGATGGCTAACAGTTCAACTTGTTGACGGTCACATACCAA
GAATTGCTGGTCTATCAGATGATGATACTCTAGCGGTATCAGACAATTTG
GAACCAGCAATATGGTTTCGCGTGATGGTCCTACAATCAATAACAATAGA
CTGTGATAAACGTGTTGCTTGTTGGAGGAACGCTACTATCGACAAAACGA
GTAAGTGTTGTATATTGATGTATCTATTGAATAAGTTGAGAAGAAGTTAA
CCcagtaattttttatctttagttctctgttcttcaaaaaaataatatat
atatagGTTTTGATGAAATGAGTTCCAATTAGGATCCCATTGAACAATAG
AATAATGATTTTCAATGTGTTATCTATCTACATTATAGAgcatattttaa
ctttttttcctgGTGTACTTGCTAAATAATTAGCGTAAACTCAATCTAAA
ATTGTCATTGTATTGCTCTTTTACAGCTGGTGAACCATTGACTCATTGGT
TATCTGGAGAAGATAGTTTTTATGACTGGGATGATGATATTGACGAACTC
TTTAATCTTGCATGCACTCTGGTTCAAGAAAATCCTCTCGCTGAGCCCAA
TGAGGTTTGACCCTTCTATTTTGATTATTTAATATCTTGCCTAttgaaat
tatatttaaaaatgatATATTGATATAAAGACTGAAACACTAGTAACTTG
TTAAATAATAGATCTCCATGTTGTATTTTTCATGACTACTAGAAACTATA
AGGATTTGATAACCCATTAATTAAAAGCACATGTGCTCAGAAGATTCTTT
ATGACGATGGAGATTTCAAACAACTTTATCAGGTAATTTACTACCTAAAT
TTTTCTtcatgtttattttttcactttaggAATCAAGGAGAGAGAAAATT
ATTGTATACGAACAAAATCTCTTTAAAATGTTGCACTGCTACGTGTTACC
AAGGATCCAGCTTTATCCTGCCGATTTAGAAAGTGTCAACAATGCATTGA
AAGCCCAAAACAAAGCTATATCTCAACTTGAAGATGTGACCTTGATGCAT
ACCCGATTAGCTGAACATTATATGACACAAATGAGGAATATCAGAGAGGT
GGAAGTCTTACCAATGTTAGATGAGCTAGTGAACGGGGGACAAGTTAGTG
AAGAGCTGTTTGAAACTTTGATGTATGATATCAAGAAGGCTGAACCAGCT
CTTAGAAATGAggtatattttttacttttgaactgACATAGTAgtttttt
tcgaagtttttcaaaaagatgaaaacactttttgcttTTAACGACTTCGG
CCTGATTATACCTGTTCAAAATATCCAGATCTTATTTTACCACGAAAGTC
CCAAGAAATTGAGCTTAAGTTGGTGCAACAAGAGGTTTTGCATGATTCAG
AGGTTATTTCTTAATTCATTTTCACAGATCAACCAAGCACAACTGAAAGT
TGATAATTTAAAAGAAGCCATGTCTAAAGGAGCTGTCAGTCGAAAAATCA
CCAATGATTTAGCAGAAGCCAGACGTACCCGAGATCAAGTTCACCAGAGC
CTAGCGAACCTCCTAATGGGGAAAGCTTTGGCTCAAACATCATTGGATAT
AGCACAACAAGTTCGGGATATGAAGATTGAGTTGAATGAATCTTGCTCAC
AGTATGTTCGTTTGTATCGGAGAGTTAAAGAAGAAAAGATGGTCTCAACG
CAAACACTTGACAAGAAGgtaaacaaatttctaaaacaaACTGTAATGGA
AGCCTGGAATTAGACAATCATCCGGAGaaatttcttaacttttcttTATA
GTATTTCTCAAAACGTGtgttgtaaaaagttttttccaaatttggttTCG
GATCAATCGGTCTTGTTAGCGCAAGCAATTTAAAGCTTTACCAAGATGac
gtttgaattttttaaaatttcctcATCAAAACTATCTTGCTATAAATAAG
ACCAAGTCCTTAATAGCCCTGACCTCATTAAAGGTCAAAATATGCATTTG
AGATCATAATTAAATTGGTTAGAAAAACCGAAAgcaggaaaattaaaatt
ttgcaattttcctcTCACATGGTTACTATGTAACAATAAACAAAGTCTGG
GTCATCGACATTTCATTATTAATAGAGAATGAATAAGGATGAAGACAATT
TCAAGTATAGTAGAACCTTCTGTAAGTTTATCCAATGCTTTAAAGGAGTT
aactaaaattttctttttgccgCGATTTAGCCAAAAAAGCTGGTCCTTGT
AAGCGGAATTTTGTCTGCTAATAGACTACTAAGAGAAATCTTCAACGTTA
GTCTGGTGAAAATAGCTTTGGTGTTTACATCGTGAATCCTTTGAAAGATA
GaaaagaatatgattttttttactcttttccAATTTATCAATTCTGTAGT
TACGAGCACTTGGTGTACGCGAATGTATATTGTCAGTCATCAAAGATCTG
GAGAAGGATAGCCCAACATATGGTGAAGATCCCGAGAGTAAGTGACTATA
TTCTTCTGGGTTGTTTCTGTGGTGTGTCTTTTACATAAATAAAATGGCAG
ACCATCAGCGACATGTACATTTTTGGCCGAATTAGCATTAGCATTAGTAG
TATTAACCTACCTCTAGATTTAGAGAAGGATAGTCCAACATATGGTGAAA
ATGTTTTGTATGGCTTAAATAAAGGTCAGCTTCATGTACAtttttttGGA
GAGATTCTAATACTCGTTACAATTTTTTAGATTGCAAACACTCAAgagta
aattattttttttagtcaaagttACTGAGAAACTCACTCAGGACTTGTTG
GTTACTATTATACCCGCAAATTGCATTATGGAGATTGCTTTACCAAGAGC
TTTGCCAATCTTGTTATTTTACTTCCGttttttttGGTAAAGGTACTCTA
TTTATTGACCCTTCTTTTAGTCAAAGAGACGAAACCAGAATGGCAGACGC
TGAACCAACGAATTTCATCTATTGTACACAACAAGGAACACCCTGTTGGT
ATCAAGTTCAAAAACTTCACACAAGAATTGCAATTAAATTACCAGAAGAT
CATGCGAACTACCGCTAATATCGTGTACGGCTCTTCGCGCTTCATGACCA
GTTATAACGAGTTTTACGTCATCAGTGAACAAGATTTAGGATTGAATAAA
GTCTTCTTGACTGACCAATGTAATGTCGTATTACAGCATTTGTACATGGT
GTCTGAGCTTCTCTCCGAACACTTCAGTAAGCGGACACAAATGTTTATGC
GAAAAGTGAggttatgttatgagaaatgtTTCTTTAATCGAATCGGGAGA
GATTTGATTCTAGTCTATCGTGTTGTACATGGGAAAGTCATGCAAACTAT
TGAAGCAAGAGTGAATGCTTTAAGAGAATTGAGCGTTTGTAAGCTAGGCT
TGCAGATGCGTGATGAATGGTGGTTGGAGTTGTTTGAACCTGATCATGAA
ACGAATTCATTTGAATATTCGGAACCTGAAATGTCGGATGCATCGAATAC
CGAGGGCCGATCGTACGAAGGTGAGTTCGGTGACGATGAATCAACGAGTG
ATATATCGGATGAAGATTTTTGTTCCGACGATGAATCGGGCGCCAGTAAG
ATGCCAATGAACCCGTGGCGAGTACCGATCACCGATCCGGGTCATAAAGA
AATAACACAGAATTTATTGCGaagtaaaaataaagtcttGTCGCGATCTT
TGCAAAATCTTCACGACTATGGAATGAATCTTATTGAAGCAAGTACGAAA
TTATTGGAGGATCGGTTTGAGAAGACTGCTTTTAAGACCTCGCCTGAACT
TAACGTTGAGGTCTTTGGGCGTTATTTGGCTGATGAGATAGATGAGACAA
AGGAGCATAACATCCGTGAAAATATTCGTCGTTCACAAAGCGTCAACACT
ATTTTGCATTCTGAATCGTCACATGGTAGCCGTCGCTCAAGTTTGAGACG
TACTTCTATACGACACGCTGAAGATACATTTGAAAAGCATTTCGGTAGTG
CTATATCACAGATTCGATGTATCTTTACGAATTCAAGTCCCTTAAAGAAA
ATGCAGTGCTTGACGAATGCGCTTAGGACTGTATCTGAGAAAATTGTCGA
GTTGCGATtacgtctttatgaagaaggcACTGAAGTTGATCGTTCAAAAG
TTGCCGTATCTGCAGACGATTTATTGCCGTTGCTTGTATTGTTACTGTTG
AAAATGGAACCACACGACGTCGCGAAACTGTACACGGAATTGATCTTTAT
TTCTGACTTGATGGCGGATTTTTTGAGCTCAGGTGTACATTCATACGCCC
TCTGTGAGTTTCATATTGCCTTTCGTGTGTTAGACCAAACTTGTGAAGAG
TTACAGCTATAA Coding sequence (CDS) from alignment at sc0000020_pilon:703517..707928+ >XLOC_044353 ID=XLOC_044353|Name=XLOC_044353|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5064bp|location=Sequence derived from alignment at sc0000020_pilon:703517..707928+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAATGAGTTTTTCACACACAAGATGCATCTTTATCTGAAGAGTGG
AGAAAGTGAAAGATGGCTAACAGTTCAACTTGTTGACGGTCACATACCAA
GAATTGCTGGTCTATCAGATGATGATACTCTAGCGGTATCAGACAATTTG
GAACCAGCAATATGGTTTCGCGTGATGGTCCTACAATCAATAACAATAGA
CTGTGATAAACGTGTTGCTTGTTGGAGGAACGCTACTATCGACAAAACGA
ATGGCTAATGAGTTTTTCACACACAAGATGCATCTTTATCTGAAGAGTGG
AGAAAGTGAAAGATGGCTAACAGTTCAACTTGTTGACGGTCACATACCAA
GAATTGCTGGTCTATCAGATGATGATACTCTAGCGGTATCAGACAATTTG
GAACCAGCAATATGGTTTCGCGTGATGGTCCTACAATCAATAACAATAGA
CTGTGATAAACGTGTTGCTTGTTGGAGGAACGCTACTATCGACAAAACGA
CTGGTGAACCATTGACTCATTGGTTATCTGGAGAAGATAGTTTTTATGAC
TGGGATGATGATATTGACGAACTCTTTAATCTTGCATGCACTCTGGTTCA
AGAAAATCCTCTCGCTGAGCCCAATGAGCTGGTGAACCATTGACTCATTG
GTTATCTGGAGAAGATAGTTTTTATGACTGGGATGATGATATTGACGAAC
TCTTTAATCTTGCATGCACTCTGGTTCAAGAAAATCCTCTCGCTGAGCCC
AATGAGgAATCAAGGAGAGAGAAAATTATTGTATACGAACAAAATCTCTT
TAAAATGTTGCACTGCTACGTGTTACCAAGGATCCAGCTTTATCCTGCCG
ATTTAGAAAGTGTCAACAATGCATTGAAAGCCCAAAACAAAGCTATATCT
CAACTTGAAGATGTGACCTTGATGCATACCCGATTAGCTGAACATTATAT
GACACAAATGAGGAATATCAGAGAGGTGGAAGTCTTACCAATGTTAGATG
AGCTAGTGAACGGGGGACAAGTTAGTGAAGAGCTGTTTGAAACTTTGATG
TATGATATCAAGAAGGCTGAACCAGCTCTTAGAAATGAggAATCAAGGAG
AGAGAAAATTATTGTATACGAACAAAATCTCTTTAAAATGTTGCACTGCT
ACGTGTTACCAAGGATCCAGCTTTATCCTGCCGATTTAGAAAGTGTCAAC
AATGCATTGAAAGCCCAAAACAAAGCTATATCTCAACTTGAAGATGTGAC
CTTGATGCATACCCGATTAGCTGAACATTATATGACACAAATGAGGAATA
TCAGAGAGGTGGAAGTCTTACCAATGTTAGATGAGCTAGTGAACGGGGGA
CAAGTTAGTGAAGAGCTGTTTGAAACTTTGATGTATGATATCAAGAAGGC
TGAACCAGCTCTTAGAAATGAgATCAACCAAGCACAACTGAAAGTTGATA
ATTTAAAAGAAGCCATGTCTAAAGGAGCTGTCAGTCGAAAAATCACCAAT
GATTTAGCAGAAGCCAGACGTACCCGAGATCAAGTTCACCAGAGCCTAGC
GAACCTCCTAATGGGGAAAGCTTTGGCTCAAACATCATTGGATATAGCAC
AACAAGTTCGGGATATGAAGATTGAGTTGAATGAATCTTGCTCACAGTAT
GTTCGTTTGTATCGGAGAGTTAAAGAAGAAAAGATGGTCTCAACGCAAAC
ACTTGACAAGAAGATCAACCAAGCACAACTGAAAGTTGATAATTTAAAAG
AAGCCATGTCTAAAGGAGCTGTCAGTCGAAAAATCACCAATGATTTAGCA
GAAGCCAGACGTACCCGAGATCAAGTTCACCAGAGCCTAGCGAACCTCCT
AATGGGGAAAGCTTTGGCTCAAACATCATTGGATATAGCACAACAAGTTC
GGGATATGAAGATTGAGTTGAATGAATCTTGCTCACAGTATGTTCGTTTG
TATCGGAGAGTTAAAGAAGAAAAGATGGTCTCAACGCAAACACTTGACAA
GAAGTTACGAGCACTTGGTGTACGCGAATGTATATTGTCAGTCATCAAAG
ATCTGGAGAAGGATAGCCCAACATATGGTGAAGATCCCGAGATTACGAGC
ACTTGGTGTACGCGAATGTATATTGTCAGTCATCAAAGATCTGGAGAAGG
ATAGCCCAACATATGGTGAAGATCCCGAGATCAAAGAGACGAAACCAGAA
TGGCAGACGCTGAACCAACGAATTTCATCTATTGTACACAACAAGGAACA
CCCTGTTGGTATCAAGTTCAAAAACTTCACACAAGAATTGCAATTAAATT
ACCAGAAGATCATGCGAACTACCGCTAATATCGTGTACGGCTCTTCGCGC
TTCATGACCAGTTATAACGAGTTTTACGTCATCAGTGAACAAGATTTAGG
ATTGAATAAAGTCTTCTTGACTGACCAATGTAATGTCGTATTACAGCATT
TGTACATGGTGTCTGAGCTTCTCTCCGAACACTTCAGTAAGCGGACACAA
ATGTTTATGCGAAAAGTGAggttatgttatgagaaatgtTTCTTTAATCG
AATCGGGAGAGATTTGATTCTAGTCTATCGTGTTGTACATGGGAAAGTCA
TGCAAACTATTGAAGCAAGAGTGAATGCTTTAAGAGAATTGAGCGTTTGT
AAGCTAGGCTTGCAGATGCGTGATGAATGGTGGTTGGAGTTGTTTGAACC
TGATCATGAAACGAATTCATTTGAATATTCGGAACCTGAAATGTCGGATG
CATCGAATACCGAGGGCCGATCGTACGAAGGTGAGTTCGGTGACGATGAA
TCAACGAGTGATATATCGGATGAAGATTTTTGTTCCGACGATGAATCGGG
CGCCAGTAAGATGCCAATGAACCCGTGGCGAGTACCGATCACCGATCCGG
GTCATAAAGAAATAACACAGAATTTATTGCGaagtaaaaataaagtcttG
TCGCGATCTTTGCAAAATCTTCACGACTATGGAATGAATCTTATTGAAGC
AAGTACGAAATTATTGGAGGATCGGTTTGAGAAGACTGCTTTTAAGACCT
CGCCTGAACTTAACGTTGAGGTCTTTGGGCGTTATTTGGCTGATGAGATA
GATGAGACAAAGGAGCATAACATCCGTGAAAATATTCGTCGTTCACAAAG
CGTCAACACTATTTTGCATTCTGAATCGTCACATGGTAGCCGTCGCTCAA
GTTTGAGACGTACTTCTATACGACACGCTGAAGATACATTTGAAAAGCAT
TTCGGTAGTGCTATATCACAGATTCGATGTATCTTTACGAATTCAAGTCC
CTTAAAGAAAATGCAGTGCTTGACGAATGCGCTTAGGACTGTATCTGAGA
AAATTGTCGAGTTGCGATtacgtctttatgaagaaggcACTGAAGTTGAT
CGTTCAAAAGTTGCCGTATCTGCAGACGATTTATTGCCGTTGCTTGTATT
GTTACTGTTGAAAATGGAACCACACGACGTCGCGAAACTGTACACGGAAT
TGATCTTTATTTCTGACTTGATGGCGGATTTTTTGAGCTCAGGTGTACAT
TCATACGCCCTCTGTGAGTTTCATATTGCCTTTCGTGTGTTAGACCAAAC
TTGTGAAGAGTTACAGCTATAATCAAAGAGACGAAACCAGAATGGCAGAC
GCTGAACCAACGAATTTCATCTATTGTACACAACAAGGAACACCCTGTTG
GTATCAAGTTCAAAAACTTCACACAAGAATTGCAATTAAATTACCAGAAG
ATCATGCGAACTACCGCTAATATCGTGTACGGCTCTTCGCGCTTCATGAC
CAGTTATAACGAGTTTTACGTCATCAGTGAACAAGATTTAGGATTGAATA
AAGTCTTCTTGACTGACCAATGTAATGTCGTATTACAGCATTTGTACATG
GTGTCTGAGCTTCTCTCCGAACACTTCAGTAAGCGGACACAAATGTTTAT
GCGAAAAGTGAggttatgttatgagaaatgtTTCTTTAATCGAATCGGGA
GAGATTTGATTCTAGTCTATCGTGTTGTACATGGGAAAGTCATGCAAACT
ATTGAAGCAAGAGTGAATGCTTTAAGAGAATTGAGCGTTTGTAAGCTAGG
CTTGCAGATGCGTGATGAATGGTGGTTGGAGTTGTTTGAACCTGATCATG
AAACGAATTCATTTGAATATTCGGAACCTGAAATGTCGGATGCATCGAAT
ACCGAGGGCCGATCGTACGAAGGTGAGTTCGGTGACGATGAATCAACGAG
TGATATATCGGATGAAGATTTTTGTTCCGACGATGAATCGGGCGCCAGTA
AGATGCCAATGAACCCGTGGCGAGTACCGATCACCGATCCGGGTCATAAA
GAAATAACACAGAATTTATTGCGaagtaaaaataaagtcttGTCGCGATC
TTTGCAAAATCTTCACGACTATGGAATGAATCTTATTGAAGCAAGTACGA
AATTATTGGAGGATCGGTTTGAGAAGACTGCTTTTAAGACCTCGCCTGAA
CTTAACGTTGAGGTCTTTGGGCGTTATTTGGCTGATGAGATAGATGAGAC
AAAGGAGCATAACATCCGTGAAAATATTCGTCGTTCACAAAGCGTCAACA
CTATTTTGCATTCTGAATCGTCACATGGTAGCCGTCGCTCAAGTTTGAGA
CGTACTTCTATACGACACGCTGAAGATACATTTGAAAAGCATTTCGGTAG
TGCTATATCACAGATTCGATGTATCTTTACGAATTCAAGTCCCTTAAAGA
AAATGCAGTGCTTGACGAATGCGCTTAGGACTGTATCTGAGAAAATTGTC
GAGTTGCGATtacgtctttatgaagaaggcACTGAAGTTGATCGTTCAAA
AGTTGCCGTATCTGCAGACGATTTATTGCCGTTGCTTGTATTGTTACTGT
TGAAAATGGAACCACACGACGTCGCGAAACTGTACACGGAATTGATCTTT
ATTTCTGACTTGATGGCGGATTTTTTGAGCTCAGGTGTACATTCATACGC
CCTCTGTGAGTTTCATATTGCCTTTCGTGTGTTAGACCAAACTTGTGAAG
AGTTACAGCTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020_pilon | genome | sc0000020_pilon:703517..707928 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1093-2532:2973 |
| Aaloc | 1003-1089:2450 |
| Aaloc | 712-1002:1478 |
| Aaloc | 379-711:930 |
| Aaloc | 253-378:529 |
| Aaloc | 1-249:1 |
|
