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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000020_pilon:827711..833242+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044348 ID=XLOC_044348|Name=XLOC_044348|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5532bp|location=Sequence derived from alignment at sc0000020_pilon:827711..833242+ (Clytia hemisphaerica_ch_hm2_pilon)
GACCAGAATCACGAGAAGAAAGAATCGAACCATTCAAATAACGCTTCACC
ATCAACGTTGGTTAATCACCATACGGAGATAGATGAAACAGATACCGGTA
ATGAAGCTTTAGATTTCCAAcaacatcaaatcaaccaagAAGACATTGAA
GATCAAACACCAACGAACAGTaaagttgaagaaaaagaagaagacttaga
tgaagatacagaagaagaaatagaagtccttgaagaCATTATTCATCATA
ACATCTTTCTGAAGAGTAGCGCGGAAAGCTCGTTTGCACCTTACACAGCA
CATTGTCTTCTACTGAGCAATGCGACAGTGCTGGTCCTTCTTTCGCAAGT
ATGTTCTACCTTTCTCAATCAAGAAATAGTGAAGCCTTGTGCTTTCAAcc
tggcgtttgtgtgaaaaccatgcgggtcacgcgttttggattggaaattt
tcattcaaattatctagcccttcgggtttttgAAATCAATAGTTTTTCAC
CATTCAACAAGATGAATATATCACTTATTACGTGTTTCACaagacagttt
tttatcacATTATTTGTCAAAACAATGGCCATTAATATTGTATTTTAGGG
GTCTCAACTTTTTGATTTGAAGGAGGTCTTAACCCTAATTAAGCTTATTA
GTAAGAAATGTTCTTCCTtgttctattttcaaaagaccTCAAAATTTAGT
TCCTTTTTAACCATTTCTTGAAGGTCTAGCCTCAGATTGTTTGTTTCATT
TCATGATTACCTCGGACTTCCTTTTATTTTATGGTGATGGCTGATAGATG
AGACTATGATACGATTTCAACATTATTTTCCATTgtgatttacttttttt
atttagtagTTGAACTTTAAATAAACACTATAATAAACCCACCCCTTTTT
GCAGACGAATGTTGTTTATAAGAACTCGACCTCAGCTAATTTTTATTCCC
TCGAGATGTGTCTTGACATTTTtaggataaaaaaattcttggaTTCCTTT
CAATTGATATCACTTGGTTTTTTACTTTGTTTGTCTCACCACTACAGTAT
TGTATTTCTTCTTTACGTTTCTAGCATCGACATATGTTCTTGGCTTTCTA
CATTCAAAACATGTTACGATGTTTGAACCTGATCCTCGTCATcaccaaac
aaaaacaattatcATACCGCATGAAACTGTTCGATGATTGTGAAAAATAT
CGACAAAAAATTCAACTCTTCTTCTTACGGACAAGCGGTGTAAGTTTCCC
AAGATTCCCTAACGATACAACATTCATCGTTTTTTATacgtcaaaagttt
ttttttcaaatctcaagTTTTTGCAAATGGGTGTCATGATGAATGCTCTA
TCGGGCAAAGTTTTCACTAAATTTTCACTTGTCAAAACAAGTCTTCTTTC
AAAAGCTAAAAATGTGAATgtgattgggctattccagaaatagtctctGC
CCCCTAtattgaggaggtgtgacgtccagagTTGTctggaaaatagaaaa
atccagggtggtcagtaataTCAGATTGAAAAtggtcagtataacgaggt
cgaaaatccagggtggttcaaagaaacttgagaaaaaaatccaaggaggt
cctgaaaaattggaaaaatatccaggggggtcacctttttaaaaaaagat
ctcctcaacatagggggtacaaattttttctggaatagcccattccaGGG
CACCCATCCATATTtctaaaattagtattttgactACCATTTTTATAAGT
ATCTTCCCCCTCCATGTGTCAGTTTCATAAACAATTTGATATCCGTGTAA
GAATTCCCCTTTAAAAGACTCAACTCCTTTCCCTTCACTTTTAGTATCAA
ACGAATCGAATGGGAAATTACTACAAAGGTTTTGAGCAGAAATGGAACGC
CACACAAGATGCTGGACTTTCAGACTTTATCAACAGTGATACTCCTTCTG
TTGAAATGAATGCAAGGtatgtggactcaaaaacaaataCTTTTCTTAAA
AGTCTCTTAATGACTGTTATCCTCGGGAAAGGTGTTCTCCAGCCTCCAgc
caaatgaatttttttcattttttgaaaattttgatttttggggcctgggg
acgagtttttcgccaaaacgaggctaaaactttggggcagcctggagact
tcaaaaattgtcgtatttagctgaaatttggcacacttgttccttgggtg
aatatctggaagggtttttttcgtttttcaaaaaacttgatttttggggc
ctggggacgagttttccgccaaaacgaggctaaaactttagagcagagcc
tacaggcctcaaaaatggttggatttggctgaaatttggcacacttgttc
cttgggtgaatatctgggggtctacaatcaggcctatgaataatttgaag
ccactgaagttgagcctagtgagttgcgcacgttcgactatctGTAGGGT
TAAGATTCTCTGGTCAAATAACAATTCaagaaaaaatctacaaattgTCA
TATAGTTTATCTAGAGTTCAttagaattttaatttttggcacTTCATCCA
TTTATTATCACACACAAAGAACTAAAACCCTGCTTTAATACACATATCGA
AAGTAACTTCACAAGCATAAGAGTTAAACCAAGGTGGAAGATGTCAAATT
TCAATATCTGTGAGCGCGAATGAGTTTCACGTGACCATTAAAACAAAAGG
TTAGCAAGATTTCGATCTAAGACTGTATTTCAAGGCCCAAATAGCTGATG
TctccttcttttgttttgttccttCAGATTAGAACAGAACCTTGTAAACC
TGATCAAAAGCACCAAAGCACTTTTCACGCAATCCTTCATCTCCAATGAC
GGTCAAAGCTACATGGATGAAGGTCAAACGCGACTATTCCGTTCACTACG
AGACATCGCAGTGGAGCGATTGAGCCATTACAATCTCTTCTTGAATGTAA
GAGGGCAACAGAATGTCTCAATGACTGCTTACCATAATGACTTCCCTGGT
TTGGTTCATTTCATATACACGAACAGGTTTGTCGGTTATTTGGTCTTATT
AAGTGGCACTGGCATCATACGAAATTGCTCAAACCTAGGTCTGGACCAAA
GAGTCCCGCGACCCATGCCGCCCTATTTTTTCCTTAGTTAGTGCGTGTAC
GCGCACTTGAAatcagaaatatttgaaaatctaaagCTATGGAGTGATGT
CACTTGATGGGTTAAAGTACTGTAATGATGGGTGTTTACGTATGGTAAAT
GGCTTCTAGCGTCCCTAGGTTTCTATCCTGTTCAATAGCCAGCATAAAAC
TATCGTAAGGTGACGTATTAAGTAAGGAAGTCCAAAAATCTGTTAAGTTT
TTTCAGTagacaaaaataataacaataccgaaattgtttgaaattcaTCA
AACAAGTTCCAGTGTTACaaaaaaaGATCCTATTTCCTTGGAAATATTGA
CCACCCTCCCCCTCTATTTATCATCCATTATGAAATTATTTAGATAACCA
ATTAACTAATTATCAGGGCTATCCCTTATAataaaacatttattttgtcT
AATAGGGATTTTAACCTTTCACAATGATTTTAGGGTTGCAACTTCTCACT
TATAACAGACAGATGTAACTAACATGAAAGTGGGCTAGCACTTTGTCTTT
CCAACGGGCTTTTTTCTAAATCGaaaaaaagtgagggaaatttTTCTCGT
GACAGAGTATAATATGACACTTCTCATAgatttataataaattttgaatg
tAAAGAAGGCGTAACATAGAGTTTTCATATAgtgtttcattatttttgaa
aacctctTAAATTATTTCTGATGGCGTCTCTCTATCGAAATTTGATGACT
TGATGAGCGGATTTAGGGTGATAAAGATCAAAATCCTTTGGTCTTTTTAC
TGagagcaaaattttgtttttcgaattcaactttttcaaacgCTCTAGAG
ACATTGAGAAGCTAGGAGCTCTTCTGAAATACTTTAAGACTGGAATCCGT
TCAAATCTTAATCTTCCAGTGGTTGTTTTAAAATGGATatggaaatttat
tttcctcatTGGTTTGATGAAATTCAGATGGTGGTTTCGGCTTaaacatt
ttcaacttttacttACTAACAATTCACAGACAACTTCCAATTTGTAAGTT
TCAAAGATTCGAAACGATTTTTAGTTATAAGTCCTATATCTGAGCTGTTT
ACTTCTCATTAATCTAAAAATATCTCGGAACTGCTTTATTTAACTTGTTC
GATCCCTCAGAGCACCTGAAAGTCTTCCTTCATACAGATATTATCTATCT
TCACAGAGTTAGCTGGTCTTCAACGTGTTCTCCCTGGCGAACCCGAAATG
TTTATCTAAGTGTACCGTTAACGAGCCTCTTGGGAGCACCTTATAGTTCT
TTTTAGTTCTTGAGAGACTATATTTGTTGTGGTTTTTACTTTCCTTATAA
TATTTGGAGTATTTTAAGCATTAAGCTTCTGtgccacctggatttctcat
TTGAGtatccataatggtggattttCAGCGAATGACTCCTCTGGGGACCC
CCTCagcaaaaagtgaatttttttcgtGCCAAACATGGGCTGgtcatata
tcaatcgatctgAAATGTCTTACTGATCATTTTTGAGATACAAACTTGGG
TCTGAAAAGTTTGCTTTCTTAAGATATAGAGCATTTTCGTTTTattaaat
atgacttttcttCAATATCCATTCTATTTACAGAACCACGGATCAGCTAG
TGGCACCTACCGTCAACGTCAATATTGATTCGAATAATTCTTTATACAAT
CTCATCAAGCAACGAATATGGGACTATTGGCAATATTCTGAAACCATGCT
GTCTAAAGGTTATACATCATTCATGCTGCGAGACGGCGACTTTTGTTATT
CTTACTTTATATGGTTCGAAGATTCGTTAAGGAAACCAATGTTGTCACAA
AAATCCATGAAAGGCTTGAACGAAAATAAACCGACTGGTATTTTGTCTGG
AAATTATTACAAGTAAGACTTTACATTTCTCaccattatttttattttga
gccCAGCAGAGGACCCTTAATTAGCATGTCGCTGTCCGTGGTACTGAATT
GTCCTTTTTTGAAGAAGCagcgctttgtcaattcaagtcttCTGGTGCGT
GTATACATTGCAAACAAACGACAATTGCGACTCTTGCTATGTCGCTGGGA
TTTCATGCCGCTTCGGCTTCTTGTTTATTTCGTGATATGCCACTCACTCA
TTTCTATTGTTATCTATCGAATATGAAGCTAAACCTCTACCTTAGATGTC
CTTCATATCGCAAAAGCAAAAGGAAAAGCCCCTCATCAGTATTATTCCTC
CAttttttttCACCATCAGGGACCTGATGTGTCACCTCTTCCCGTCAGAA
CCGAAAGGTAGCATCAACTGTTACGAATTGTTTTGCGTCCACGTTGGATT
AGTAAGTAACCAATACGTCGCAAGTTCCTGTAAGAAGTTATCTCGCAAAT
TGGAAGGTTCCGGTGAGATCGTTGTTTTatga Coding sequence (CDS) from alignment at sc0000020_pilon:827711..833242+ >XLOC_044348 ID=XLOC_044348|Name=XLOC_044348|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2652bp|location=Sequence derived from alignment at sc0000020_pilon:827711..833242+ (Clytia hemisphaerica_ch_hm2_pilon)
GACCAGAATCACGAGAAGAAAGAATCGAACCATTCAAATAACGCTTCACC
ATCAACGTTGGTTAATCACCATACGGAGATAGATGAAACAGATACCGGTA
ATGAAGCTTTAGATTTCCAAcaacatcaaatcaaccaagAAGACATTGAA
GATCAAACACCAACGAACAGTaaagttgaagaaaaagaagaagacttaga
tgaagatacagaagaagaaatagaagtccttgaagaCATTATTCATCATA
ACATCTTTCTGAAGAGTAGCGCGGAAAGCTCGTTTGCACCTTACACAGCA
CATTGTCTTCTACTGAGCAATGCGACAGTGCTGGTCCTTCTTTCGCAAGA
CCAGAATCACGAGAAGAAAGAATCGAACCATTCAAATAACGCTTCACCAT
CAACGTTGGTTAATCACCATACGGAGATAGATGAAACAGATACCGGTAAT
GAAGCTTTAGATTTCCAAcaacatcaaatcaaccaagAAGACATTGAAGA
TCAAACACCAACGAACAGTaaagttgaagaaaaagaagaagacttagatg
aagatacagaagaagaaatagaagtccttgaagaCATTATTCATCATAAC
ATCTTTCTGAAGAGTAGCGCGGAAAGCTCGTTTGCACCTTACACAGCACA
TTGTCTTCTACTGAGCAATGCGACAGTGCTGGTCCTTCTTTCGCAACATC
GACATATGTTCTTGGCTTTCTACATTCAAAACATGTTACGATGTTTGAAC
CTGATCCTCGTCATcaccaaacaaaaacaattatcATACCGCATGAAACT
GTTCGATGATTGTGAAAAATATCGACAAAAAATTCAACTCTTCTTCTTAC
GGACAAGCGGTCATCGACATATGTTCTTGGCTTTCTACATTCAAAACATG
TTACGATGTTTGAACCTGATCCTCGTCATcaccaaacaaaaacaattatc
ATACCGCATGAAACTGTTCGATGATTGTGAAAAATATCGACAAAAAATTC
AACTCTTCTTCTTACGGACAAGCGGTTATCAAACGAATCGAATGGGAAAT
TACTACAAAGGTTTTGAGCAGAAATGGAACGCCACACAAGATGCTGGACT
TTCAGACTTTATCAACAGTGATACTCCTTCTGTTGAAATGAATGCAAGTA
TCAAACGAATCGAATGGGAAATTACTACAAAGGTTTTGAGCAGAAATGGA
ACGCCACACAAGATGCTGGACTTTCAGACTTTATCAACAGTGATACTCCT
TCTGTTGAAATGAATGCAAGATTAGAACAGAACCTTGTAAACCTGATCAA
AAGCACCAAAGCACTTTTCACGCAATCCTTCATCTCCAATGACGGTCAAA
GCTACATGGATGAAGGTCAAACGCGACTATTCCGTTCACTACGAGACATC
GCAGTGGAGCGATTGAGCCATTACAATCTCTTCTTGAATGTAAGAGGGCA
ACAGAATGTCTCAATGACTGCTTACCATAATGACTTCCCTGGTTTGGTTC
ATTTCATATACACGAACAGATTAGAACAGAACCTTGTAAACCTGATCAAA
AGCACCAAAGCACTTTTCACGCAATCCTTCATCTCCAATGACGGTCAAAG
CTACATGGATGAAGGTCAAACGCGACTATTCCGTTCACTACGAGACATCG
CAGTGGAGCGATTGAGCCATTACAATCTCTTCTTGAATGTAAGAGGGCAA
CAGAATGTCTCAATGACTGCTTACCATAATGACTTCCCTGGTTTGGTTCA
TTTCATATACACGAACAGAACCACGGATCAGCTAGTGGCACCTACCGTCA
ACGTCAATATTGATTCGAATAATTCTTTATACAATCTCATCAAGCAACGA
ATATGGGACTATTGGCAATATTCTGAAACCATGCTGTCTAAAGGTTATAC
ATCATTCATGCTGCGAGACGGCGACTTTTGTTATTCTTACTTTATATGGT
TCGAAGATTCGTTAAGGAAACCAATGTTGTCACAAAAATCCATGAAAGGC
TTGAACGAAAATAAACCGACTGGTATTTTGTCTGGAAATTATTACAAAAC
CACGGATCAGCTAGTGGCACCTACCGTCAACGTCAATATTGATTCGAATA
ATTCTTTATACAATCTCATCAAGCAACGAATATGGGACTATTGGCAATAT
TCTGAAACCATGCTGTCTAAAGGTTATACATCATTCATGCTGCGAGACGG
CGACTTTTGTTATTCTTACTTTATATGGTTCGAAGATTCGTTAAGGAAAC
CAATGTTGTCACAAAAATCCATGAAAGGCTTGAACGAAAATAAACCGACT
GGTATTTTGTCTGGAAATTATTACAAGGACCTGATGTGTCACCTCTTCCC
GTCAGAACCGAAAGGTAGCATCAACTGTTACGAATTGTTTTGCGTCCACG
TTGGATTAGTAAGTAACCAATACGTCGCAAGTTCCTGTAAGAAGTTATCT
CGCAAATTGGAAGGTTCCGGTGAGATCGTTGTTTTatgaGGACCTGATGT
GTCACCTCTTCCCGTCAGAACCGAAAGGTAGCATCAACTGTTACGAATTG
TTTTGCGTCCACGTTGGATTAGTAAGTAACCAATACGTCGCAAGTTCCTG
TAAGAAGTTATCTCGCAAATTGGAAGGTTCCGGTGAGATCGTTGTTTTat
ga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020_pilon | genome | sc0000020_pilon:827711..833242 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1165-1326:5371 |
| Aaloc | 886-1161:4735 |
| Aaloc | 637-882:2779 |
| Aaloc | 514-633:1845 |
| Aaloc | 349-513:1075 |
| Aaloc | 1-348:1 |
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