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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000020_pilon:1042823..1046959+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044340 ID=XLOC_044340|Name=XLOC_044340|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4137bp|location=Sequence derived from alignment at sc0000020_pilon:1042823..1046959+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTGTCCGTTACCCTGCTCATCCTGAAAGGTAATTACTTGCTTATTT
CAATTGTTAGGGACATCAcaatcacaaaaaaacaaataattttgatgatt
taaaattttactttaatcaGCTTTGATAAATCAGATCAGATTTATTTCAG
CATGTCTTATTCAACCTACTTTTAAAGACACTTCATTTTACTCGTTTCTC
TACGATTTTCAATCGTTTTTATCTTAGATTGTCACACAAAAGATTTGCTG
TCGTTAGCGAAAAGAAAGGTAATGTTTCCCACTAAAAAGTCGAAGAAGTC
GAAGATcgttcaaagtcaaaaatttgtgctttgtttgtttttttataaat
ttagaatataattttcgaagattttgGTCAAACTAAAGTAAGCAAAGTGA
TAATTGTTCTGgtatttgttttgatctttatCCCATTTCAGGTAAAAGAC
ACCGCCAGCACAAGCGTCATCGAAATGATGATGTATATATCGTGGACACT
GGTCACCATAGAAGCCTTGGTAGAGAAAAAATGTTGGTTGAACAAGCTCC
TGTTTTGATTGAAAGCCCTCGGCGGAGACATCGTCATCGAAATGATGATG
TGTACACCGTGGACACAGTACACCATGGAAGCTCTGGTAGAGAAAAAATG
TTGGTTGAACATGCTCCTGTTTTAATTGAAAGCCCTCGGCGCCGACATCG
ACGTCGGAAACATCGTGATATTGTGTATGTTGTTGAAGACAATCGCAAGT
CCTCTCGTAGAGATTTCGTTCGAGAGGGAAAAGCTCGCCATGTGATTGGC
GGAAACATAAATTCACACCATGAACCAAATGATTTCAGACGAAGACGTCA
CCCTATAGGCGGTGAGGAATTCTATGTCATTGATGATGGCCTTGAAGAAG
TTTTGGTTGACTACGCAGATTATTCGAATGATATGATAGAGATAGTCGAT
GATAGAGGTTACAATGGAGCTGATATTGTTTATGAAGATGAGGTGATATT
GGACCAAGAAGGTCATCGTTTCTCAGATCATGCTGACTATAAACGTTCAG
TTGATAATTGGAATTTGCCAGCTCTTCCATCATCATCGAAAACTTCAAAT
CATTATAACTCACAATCCGAACATCACCAATCCTTCGATTCCTCAAATCA
CGGTCACGGTATTTCTTCAGGACATACTATAAATGAAGAAGAATCCAGGA
TAGTAAGTGTCATTGAGCAACCTCCCATCCCCAGAGATTACCATAAATGG
AAAGTTATCGGTGATGTTCCCAAAGCGATCATAAGAATGAAACAACATTC
TGAACATTCTTCACAAAATGGTTTTGATTCTTCAAATCACATGTCTATGA
GAGAATCAGAAGAAGGTGTTATGAATGTGATATCACAACCCCCGGTTAAG
AAGGACTATGAAAGGTGGAAAGTGATAGGAGACGTGCCTCAAATTGTGAC
TGAAAATGCAGTCCAATCAGGGGGTAAAACgaagaaaatttcattcaaCG
AATCGGCACACAATGCTATGAATGGCCATAGTGAATCCTACAATACAAAG
AGTTACCATGACGAGAGCGTTAACAATGGGACTAGGGTTGAAACTactga
aaaaatatattcagcAAGCTCAAATACAACTGGTAAAGCTGACAAGCTTG
TCCATGATATACCAGAGTATGCAGTGATCAATAAGAAAGGGAAAGTCAAG
AAATCAGAACTCTATGACAAGATAGATTTCACTAAAAAACCTTCCCCGGA
ATTACGAGTAAAGAATTCTCAAGACTACCAATCGATTCATGAGGTCCAGA
AACAAACAAACTCAGCAATAACGGAATCTTCGAATGATGATCACAGCCGA
TTGCCACAGCACCAATCCAGCCATCAAGCAATGGTGCACGATATTAAAAA
CGGTGCCTCAAACGATCTCGATGATTTTATGGAGACGATCAAAACGACAA
CTAAAACAACAACGAGGACCATGTATAAGGTAAGTGTTTCATTGCTCTCA
AAGGATATCGTACTTCAGAAGCCATTGAgaagttttactttttctaaTGC
ATTTTACGCTTTTTATAGTCCTTCTCATTTCAATTGTGATCCTGGTTTTA
TCGCTTCTTACTATTCTTACCATATCAAGACTAACATTCCATCAATCTCA
GTTATATCACCAGAGAGCCATAATTTTGTGTCAAGTTGTATCAGGtagaa
tatatttttgttttaatcctTTAGATGCCGATTGAAGAATCACCCCACCA
TGAATACGACGACAACCATACAGGCCATCACGATTGGGAAGACCGAATCA
TGCGTAAAGTATCAACCCCCTCAGGTTAGTTGCAactcatagtgcggaaa
ggggtctgatccccccttcttaaatgaccccTCTCCTTCTCGGCATCCCC
GAACCTTTAAAAGTGCCTATCCCCAaaggattttgcacaaaaatatagct
aacaaatatatgtgaaatatctttagagagagaaagcgaaataataaact
cTACTAACAGAACTCTtctactctaacagaaaacttcctttcatgaagtC
CAAATTCAGATCCCCCTTCTTCAACTtttcggaaggtgtcatcccccccc
cttaagaaagggggagggggtctgaactATGCAATTTCTAGAACGGTATA
TTTTTAATGTATCTCTGAGAATCGgcttaaaattttaaatggcCAAAAGG
AGAGTACTTTCTGTACTAGTAAGTCATTACTTtcagacaatgtatacaat
atttGAACAGCTCCATGCTATACTGCTGTTAATTACCATGAATAATTTTC
CTTTCATCACTAGCTCAAGCGCATGTTGGCGGTGTGGCACAAAACAGCCA
CTCTGTCGAAAGTGACCTCAAAACCTGGATGGATGAACAACGCTCCAATC
GCCGAAAAAGTGGTAACATTACACCGATACCAACACAGAGTGTTCTGGTA
GACGGAGACATGACACCTCCATTACGGCGCCAACGCGTTGACACTGCCAT
CATAGAGCCGGAAGTGAATGTTGGTACTGGACAACAAGATTATTTCGCTG
AAGATTTCACTAAAGACGAAGTTGATGGTAACGCAAAGATTCTTCAAAAC
GATGGCCAGAAAAGAAAACGAAGAAGTTTGCTGGATCGATTGAGAGGGAA
ATCTACTTCACCAAGGGAAAATGATTATGAAGAAGAGGAAAAAGAAGATG
ATGAGGACTCGTGGTATCCTGGGAAACATTTGAAAGAATGGTATCCTGGG
AAATTTAAAGGTAAGGTAAAGTTTTTCCCGCTCGATTTTCATTCTTGTTA
TACTTGGTAACGTTCAAGGCAAATGGTTCATGTTATGAAAAGCTCGTGAT
TCTTGCACAAGAAAAGTCTAGAAAGCTCGGATTCTTTTCTGCTTACTATT
CACGTATTTTCTACTCAGATTTCTCGCCTATTCACGTTCACATTTCATAG
ATAAAATCAAAGATTGCATCGAGCAATACTTGGCTGAAAATCCTTCTCCT
TGGGGCAGACTGAAAAGATGTGGTAATCCTGAAACGTGTCAAGAGGTCAA
GGATAGAATTAAGGAACGCACTATATTCATGACACCGACGTCCGCTAACC
AGATGGTAAGAGTTCATATGAAAATATGGATATCTATACTGTTATTTTAG
TATTATCGTTATTATTGATATCATATAGAACCTTGGAACAGTTGATTTTT
TCTGCTCTGGAGCGCCCCCATTTTCAACGAGGCTGCTTGACttgatttag
atttttgaaatattagtaGGGCGAGCTATTTTTAACGTTTCCGTCAAATC
ATTACTTGAATTCTGCTGACAAAAACAGTCTGTGCTCATACGCTCTTAAC
TGTGAAAAAATACAAGGAAGCTGATCCATCCTATACTTTACTTTAATTTA
TTTACCCCCTCCATTCCTCCTTTTAAGCATACGAAGTCAACTGAATTGAA
TCTTGACAAAATGGAGCAAATTGACGATGGTGAGAATATCTCGTTCATCA
GTCGTTGTGTGGAGAACGATCCAAATGCCAACACTGACGATGAAGAAGAA
ACAATGAACAATAAAAGTGGAATGTACATCAAGTTCTTTTGTGAAGATCA
TCAAGAATGGGAAGATAAATGTTGCAAAAGCAATTGA Coding sequence (CDS) from alignment at sc0000020_pilon:1042823..1046959+ >XLOC_044340 ID=XLOC_044340|Name=XLOC_044340|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5046bp|location=Sequence derived from alignment at sc0000020_pilon:1042823..1046959+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTGTCCGTTACCCTGCTCATCCTGAAAGATGCCTGTCCGTTACCCT
GCTCATCCTGAAAGATTGTCACACAAAAGATTTGCTGTCGTTAGCGAAAA
GAAAGATTGTCACACAAAAGATTTGCTGTCGTTAGCGAAAAGAAAGGTAA
AAGACACCGCCAGCACAAGCGTCATCGAAATGATGATGTATATATCGTGG
ACACTGGTCACCATAGAAGCCTTGGTAGAGAAAAAATGTTGGTTGAACAA
GCTCCTGTTTTGATTGAAAGCCCTCGGCGGAGACATCGTCATCGAAATGA
TGATGTGTACACCGTGGACACAGTACACCATGGAAGCTCTGGTAGAGAAA
AAATGTTGGTTGAACATGCTCCTGTTTTAATTGAAAGCCCTCGGCGCCGA
CATCGACGTCGGAAACATCGTGATATTGTGTATGTTGTTGAAGACAATCG
CAAGTCCTCTCGTAGAGATTTCGTTCGAGAGGGAAAAGCTCGCCATGTGA
TTGGCGGAAACATAAATTCACACCATGAACCAAATGATTTCAGACGAAGA
CGTCACCCTATAGGCGGTGAGGAATTCTATGTCATTGATGATGGCCTTGA
AGAAGTTTTGGTTGACTACGCAGATTATTCGAATGATATGATAGAGATAG
TCGATGATAGAGGTTACAATGGAGCTGATATTGTTTATGAAGATGAGGTG
ATATTGGACCAAGAAGGTCATCGTTTCTCAGATCATGCTGACTATAAACG
TTCAGTTGATAATTGGAATTTGCCAGCTCTTCCATCATCATCGAAAACTT
CAAATCATTATAACTCACAATCCGAACATCACCAATCCTTCGATTCCTCA
AATCACGGTCACGGTATTTCTTCAGGACATACTATAAATGAAGAAGAATC
CAGGATAGTAAGTGTCATTGAGCAACCTCCCATCCCCAGAGATTACCATA
AATGGAAAGTTATCGGTGATGTTCCCAAAGCGATCATAAGAATGAAACAA
CATTCTGAACATTCTTCACAAAATGGTTTTGATTCTTCAAATCACATGTC
TATGAGAGAATCAGAAGAAGGTGTTATGAATGTGATATCACAACCCCCGG
TTAAGAAGGACTATGAAAGGTGGAAAGTGATAGGAGACGTGCCTCAAATT
GTGACTGAAAATGCAGTCCAATCAGGGGGTAAAACgaagaaaatttcatt
caaCGAATCGGCACACAATGCTATGAATGGCCATAGTGAATCCTACAATA
CAAAGAGTTACCATGACGAGAGCGTTAACAATGGGACTAGGGTTGAAACT
actgaaaaaatatattcagcAAGCTCAAATACAACTGGTAAAGCTGACAA
GCTTGTCCATGATATACCAGAGTATGCAGTGATCAATAAGAAAGGGAAAG
TCAAGAAATCAGAACTCTATGACAAGATAGATTTCACTAAAAAACCTTCC
CCGGAATTACGAGTAAAGAATTCTCAAGACTACCAATCGATTCATGAGGT
CCAGAAACAAACAAACTCAGCAATAACGGAATCTTCGAATGATGATCACA
GCCGATTGCCACAGCACCAATCCAGCCATCAAGCAATGGTGCACGATATT
AAAAACGGTGCCTCAAACGATCTCGATGATTTTATGGAGACGATCAAAAC
GACAACTAAAACAACAACGAGGACCATGTATAAGGTAAAAGACACCGCCA
GCACAAGCGTCATCGAAATGATGATGTATATATCGTGGACACTGGTCACC
ATAGAAGCCTTGGTAGAGAAAAAATGTTGGTTGAACAAGCTCCTGTTTTG
ATTGAAAGCCCTCGGCGGAGACATCGTCATCGAAATGATGATGTGTACAC
CGTGGACACAGTACACCATGGAAGCTCTGGTAGAGAAAAAATGTTGGTTG
AACATGCTCCTGTTTTAATTGAAAGCCCTCGGCGCCGACATCGACGTCGG
AAACATCGTGATATTGTGTATGTTGTTGAAGACAATCGCAAGTCCTCTCG
TAGAGATTTCGTTCGAGAGGGAAAAGCTCGCCATGTGATTGGCGGAAACA
TAAATTCACACCATGAACCAAATGATTTCAGACGAAGACGTCACCCTATA
GGCGGTGAGGAATTCTATGTCATTGATGATGGCCTTGAAGAAGTTTTGGT
TGACTACGCAGATTATTCGAATGATATGATAGAGATAGTCGATGATAGAG
GTTACAATGGAGCTGATATTGTTTATGAAGATGAGGTGATATTGGACCAA
GAAGGTCATCGTTTCTCAGATCATGCTGACTATAAACGTTCAGTTGATAA
TTGGAATTTGCCAGCTCTTCCATCATCATCGAAAACTTCAAATCATTATA
ACTCACAATCCGAACATCACCAATCCTTCGATTCCTCAAATCACGGTCAC
GGTATTTCTTCAGGACATACTATAAATGAAGAAGAATCCAGGATAGTAAG
TGTCATTGAGCAACCTCCCATCCCCAGAGATTACCATAAATGGAAAGTTA
TCGGTGATGTTCCCAAAGCGATCATAAGAATGAAACAACATTCTGAACAT
TCTTCACAAAATGGTTTTGATTCTTCAAATCACATGTCTATGAGAGAATC
AGAAGAAGGTGTTATGAATGTGATATCACAACCCCCGGTTAAGAAGGACT
ATGAAAGGTGGAAAGTGATAGGAGACGTGCCTCAAATTGTGACTGAAAAT
GCAGTCCAATCAGGGGGTAAAACgaagaaaatttcattcaaCGAATCGGC
ACACAATGCTATGAATGGCCATAGTGAATCCTACAATACAAAGAGTTACC
ATGACGAGAGCGTTAACAATGGGACTAGGGTTGAAACTactgaaaaaata
tattcagcAAGCTCAAATACAACTGGTAAAGCTGACAAGCTTGTCCATGA
TATACCAGAGTATGCAGTGATCAATAAGAAAGGGAAAGTCAAGAAATCAG
AACTCTATGACAAGATAGATTTCACTAAAAAACCTTCCCCGGAATTACGA
GTAAAGAATTCTCAAGACTACCAATCGATTCATGAGGTCCAGAAACAAAC
AAACTCAGCAATAACGGAATCTTCGAATGATGATCACAGCCGATTGCCAC
AGCACCAATCCAGCCATCAAGCAATGGTGCACGATATTAAAAACGGTGCC
TCAAACGATCTCGATGATTTTATGGAGACGATCAAAACGACAACTAAAAC
AACAACGAGGACCATGTATAAGATGCCGATTGAAGAATCACCCCACCATG
AATACGACGACAACCATACAGGCCATCACGATTGGGAAGACCGAATCATG
CGTAAAGTATCAACCCCCTCAGATGCCGATTGAAGAATCACCCCACCATG
AATACGACGACAACCATACAGGCCATCACGATTGGGAAGACCGAATCATG
CGTAAAGTATCAACCCCCTCAGCTCAAGCGCATGTTGGCGGTGTGGCACA
AAACAGCCACTCTGTCGAAAGTGACCTCAAAACCTGGATGGATGAACAAC
GCTCCAATCGCCGAAAAAGTGGTAACATTACACCGATACCAACACAGAGT
GTTCTGGTAGACGGAGACATGACACCTCCATTACGGCGCCAACGCGTTGA
CACTGCCATCATAGAGCCGGAAGTGAATGTTGGTACTGGACAACAAGATT
ATTTCGCTGAAGATTTCACTAAAGACGAAGTTGATGGTAACGCAAAGATT
CTTCAAAACGATGGCCAGAAAAGAAAACGAAGAAGTTTGCTGGATCGATT
GAGAGGGAAATCTACTTCACCAAGGGAAAATGATTATGAAGAAGAGGAAA
AAGAAGATGATGAGGACTCGTGGTATCCTGGGAAACATTTGAAAGAATGG
TATCCTGGGAAATTTAAAGCTCAAGCGCATGTTGGCGGTGTGGCACAAAA
CAGCCACTCTGTCGAAAGTGACCTCAAAACCTGGATGGATGAACAACGCT
CCAATCGCCGAAAAAGTGGTAACATTACACCGATACCAACACAGAGTGTT
CTGGTAGACGGAGACATGACACCTCCATTACGGCGCCAACGCGTTGACAC
TGCCATCATAGAGCCGGAAGTGAATGTTGGTACTGGACAACAAGATTATT
TCGCTGAAGATTTCACTAAAGACGAAGTTGATGGTAACGCAAAGATTCTT
CAAAACGATGGCCAGAAAAGAAAACGAAGAAGTTTGCTGGATCGATTGAG
AGGGAAATCTACTTCACCAAGGGAAAATGATTATGAAGAAGAGGAAAAAG
AAGATGATGAGGACTCGTGGTATCCTGGGAAACATTTGAAAGAATGGTAT
CCTGGGAAATTTAAAGATAAAATCAAAGATTGCATCGAGCAATACTTGGC
TGAAAATCCTTCTCCTTGGGGCAGACTGAAAAGATGTGGTAATCCTGAAA
CGTGTCAAGAGGTCAAGGATAGAATTAAGGAACGCACTATATTCATGACA
CCGACGTCCGCTAACCAGATGATAAAATCAAAGATTGCATCGAGCAATAC
TTGGCTGAAAATCCTTCTCCTTGGGGCAGACTGAAAAGATGTGGTAATCC
TGAAACGTGTCAAGAGGTCAAGGATAGAATTAAGGAACGCACTATATTCA
TGACACCGACGTCCGCTAACCAGATGCATACGAAGTCAACTGAATTGAAT
CTTGACAAAATGGAGCAAATTGACGATGGTGAGAATATCTCGTTCATCAG
TCGTTGTGTGGAGAACGATCCAAATGCCAACACTGACGATGAAGAAGAAA
CAATGAACAATAAAAGTGGAATGTACATCAAGTTCTTTTGTGAAGATCAT
CAAGAATGGGAAGATAAATGTTGCAAAAGCAATTGACATACGAAGTCAAC
TGAATTGAATCTTGACAAAATGGAGCAAATTGACGATGGTGAGAATATCT
CGTTCATCAGTCGTTGTGTGGAGAACGATCCAAATGCCAACACTGACGAT
GAAGAAGAAACAATGAACAATAAAAGTGGAATGTACATCAAGTTCTTTTG
TGAAGATCATCAAGAATGGGAAGATAAATGTTGCAAAAGCAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020_pilon | genome | sc0000020_pilon:1042823..1046959 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2314-2523:3928 |
| Aaloc | 2161-2313:3453 |
| Aaloc | 1714-2157:2816 |
| Aaloc | 1612-1710:2225 |
| Aaloc | 76-1611:444 |
| Aaloc | 34-72:229 |
| Aaloc | 1-30:1 |
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