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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000187_pilon:310370..317515+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044335 ID=XLOC_044335|Name=XLOC_044335|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7146bp|location=Sequence derived from alignment at sc0000187_pilon:310370..317515+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCCAAGAACAAAGGTATGTTTTTTATGATTatttcatcatcaatttt
ttctaCAACTAGTGTCTATGTGTAAAGCGAGAGCACAAATTGCTAAGATA
GCAGACATGCCAACTCTCACACATTGATTGACTGATTGAGCAGGTTGGCA
GACGACCCTGTGCCGCCGATGCACTGGACAGTCTGGTGTGTTTTGTCTGG
TGCCAAAAAGTATCCCTCAGCCACACCGGAAACCTTTTGTCCGGTGATAT
TTCCGGGGGATAATTTTGTTAACTTCTGGACACTGGAcaaagtttgttta
aaaaaattgtgtgcACTGGGACGCACCACCAGGCTTAAGTCTGGTGTTAA
GATTGTCCGGTGTTAAAACCTGTCCTCATCCAACACCGAACTTTGCGTGT
CCTGTGTTCGtaaagtccggtgcgtcgacaGGGTCGTGTTggccacgtgc
gtttggtttgggaacgcgaacacgaacgcaaactacccatgtctaaactt
ttcaatttatctccagaactaacagattttttgaaattctgtaaaaaggt
ctaagttcctgaatagttttactatgtcctatgaaaaaatcataagcatc
agtctaatactcgttcatctatttaagattgaagacaaaaatttgcgaag
aaaaataaaccttgagcacaaaaaatgcttttttaaacacttttttccac
cgaaaaacaaataacttttacagacttaaccgtagagtcgtctaatctcg
acatacgtcttgcaatctcgacaccggatctgtaaaataatcaaaacaaa
ccttgaatgaaattcttggtatcattcttatcgaacaagttcatccatca
aactagaagttcaataaacattgcaatcctttcaattaaaaaaacagcca
aattataagcagttttacacaacacacgaaacgcatgcaaacttcctcgt
gtccatcattaaaattttacaactttattacgcttcaagtcacgtgataa
aaataattcgcgcgcttagtagacctggtttccatttccttttttattta
ttacaagcacacgctctaggcgctaggaggccgcgttaaacttttaggcg
ccgcacctagcacacccggtcccttttcaaattcataaggaaaccgggtt
cttttaattattttcggttcacggtaaaaaggtctactaaaaaattcctc
gcgtgaaaaatgttgttgtgatttgggcatcttcgttaaaagcatgctaa
ttagttttttagtgattagtgttcttttcaaatataagtaataacagttc
acatttctcatattatattatcaatctgtgacgtggatagagagagagaa
caatttagtgattgattgataactttggtatgtatttgtttatgtttgat
tttttatttcgaagaccagcctacagctatgtcgagattgcaagacgtat
gtcgatattaaacgactctacggtaccttccccaaacattgaagaagcct
ctactaattaaagtaaatgagataagataagataaaaccttaaaatcaac
cagaatttacaaccttttgtccaaagaaaaagacgtgcttttctcgccgc
cattttgtttccgaatgagaattctagagaattccattcgtttccagctc
ccgcggtcttttttcatccaatcagatcgcgggatttcactttcgctttc
tctagtccaataagactgcgggatttgagtcatgtgacatctctattaaa
aacccgcgcgaaatacagggggtcacaaatagaaatacagggggtcacac
tactggctacaggaactgaaagcaagcaattaaggccaatatttttggtt
tttctgaaggacaaaaggtataggaaggtataggaagctttactgaaaga
gggataaagctgggacaatctatttgaaagatatggacataaaaaaggca
cttttttgggtgataattaagattttactcagaaactttaaaattctctt
acccctgTCTCaggcccccctgatatgagcaagggaaccatgttggcgac
ccctactgaaaatttcagatcaaaacaaacaaggaattaattcctgtaac
tcgaagaaaattggaaaaagctggtttttgactgctTCTGATCCTTAAGT
GCAGGtggcgtttgcgtagggtaaaatggcaaaatgcgaaaatcgaattt
ggcaaaaaatttttgaaaaatgaccctacaagatttgactatatcttttt
attccatgaagagattaatttcaaataaaaattatattgacaatgaatgg
gtaaggtttctagaaatccaaacataaattgcatagcttttaccaaaaaa
tagcaaagttaagcaaattttcaatcgatccaGGGATTGAATTAGCGTAT
CGCATTTCGCAATTcgcgatgcgtttttggattactttacaagctaaaaa
ttgaaaattgatccattttagaATGCAAAAgcatgcttatcaaaaaattg
cgatgcactttctatcccttatttcgatgcctgagttcatatctttaaga
gacttcaaaaacccactgagattttttgaggctataaactagacctacta
aggaagccttgctgaaagtttcaaaaaaatttgttgttgcagcaaaaaga
tacgccatcttgaatttcactccagatctgccaaaatagctatttttggc
cattttttacGGTTACAcaaagatggaaatcctgaaaacgttattttttt
ggccaaaacccaccagtaaaccactccaggtcaaaggtttgcttcaaaaa
agtctcaaggactatcagcagccagctaaaagtgcttccaaacccagatt
atgCAAAGTCTGAACCCCCCTACAGGAGGTGTTAAAGATTTTCGGGggaa
attttggagactcaatttgattttttctgattccctacaaaaagtatGTG
TACTTAAAGTaatgtacttaaaaataaaaattcattggctttcaaaatct
gctcctcAGATTTTCGCTTAGGCTCTGGGGGCCatgtatattttccaaat
tgaatatttcaaaatatttcaaattattgccATTGGAtttttttGCCCCA
GGGCCCAGTCCCATTCAGTTTTGATTCTCgtttcttttgctatatttttc
aaatgcgattgttttgatttacagctgccatctttatagcataataACAA
AGCTGTTCTCATGTGTGTGCGCTTCCTGCACTAGCATAGATAAGGTAAAA
CCTCAGGATAAGAGTAAACAAACATGGTaccatggtttcagcccactttt
ctggtgcccccattgaagcatggtgcccccaacgagttaggtccccttga
aaaattgctttgagttaggtacccctattcagcagataatttctttgaat
tgacacttacttttgatacttttgatgggttttttgagtctctcaatcat
ccaatttggaaaTCCGATGATAAACCATTTCTCTCGCACTGTTTGAATTC
GCTCTCCTGTAGGGATAATAATTCGGGAGCAGTGGTTCGTCCGGCagtgt
ggaaagaaaaaggtcaagttgttttttaaatttaaaatttttgtgcAGTT
TGTGATATTACGAATGTAGAATGGGAGAGAATTGAAAAGCTTAGGTCCTT
CTTCAGATAGTGAGCCTCTCCAAATGTTTTTCTGTTTAGAATTTACTTCT
TTAAGGTGGCATTTTCATCTGAGCCTCTGGTTTTCGTAGCAGGTGATACC
CCCTTTGTTCTCAGAGtggttgaaatttggagaaTATTTTTCTAAGATAT
ACCAAGTATAGATGATTTGATATCTTTCTCTACGTCTTTCCAGACTGTat
agttttagagttttaagtttttcccaatagttcagtttttgtaaagagaa
tattccatttaggaatgatttttgaagctgttcTAGTCGTTGCATTTGGT
GTCTCTTGGATGGTGACCATAGCTGTGAACAGTAATCAATGTGAGGGACT
GCCAATGTCTTCCATAGGGTCAGCATTACAGTAGGGTCCCTTGTTTTGAA
AGTCTGATATATCCATGAACTGATGCCTTGACTTTGTCGATTACATTTTC
TATATGATTGTCATATGTCATACCCACATCTAAAGTGATCCCAAGGTCTT
TGACTGTAGTCTTGGTCTCTATCACCTTTTGGGTACCAGAGAAGTATTCA
TTTCTACTATAATTGAGATGTTCAAATTTAAGTCCATTCAATTTCAGATT
ATTCAATCCAGTCCATTCATAGACTGTGTTCATGTCATCTTGGAGCTGAA
TGATATCAGCatggtttttgatttctttcattagacgtgtatcatcagca
aatgatGATAAGAAAGAGTGTAATATCTTTTTGTCAATATCTTGTATCAT
TATCAGAAACAGTAGAATTGatactttttgttcttttgtcattccaaaAA
TCTTAAATGAATCTTAGTGAAACagagccaaaaaaaattatctgcTGAAT
GGActtaactcaaagcaatttctcaaggggacctaactcgttgggggcac
ctgaaaagacgttgtgtgaaaaatttattttggagCTAAACAAACAcatt
ttgcctgcgaggggttggGCAAGTTGGTTTTCAGATTTTAACTCTACTTG
GCTATCTTCTAGGCTATTACTTTAAAAGTACACTGTTAGATTTCAGTGGA
TTGCACTATTGCTCGAGGAATgaaggatttcaaaaatttaggcTACCAAT
CCACCAACCCATTTTTAAAGCTTCTAGGAACGAACCAAGCaaacaataga
ccttatcggagtttttaatttttctaaaaaagcgatgcattgtgggattg
tttcgagtgtattaattacaatagaattccctcgaggaattcctaagaga
tttctattgtaatacactcgaaacaatcccacaatgcattgcttttttag
aaaaattaaaaactccgataaggtctattgggCCTGTCCTATGGAGTAGT
GCCACTATTGGGGTGCCACTTTCAGAATGTCAAAAAATAGGTAGAAAATT
AAGCTTAAGATCATTTTTCCTAAGTTCTTTTTTATTAAACCATaggaaag
ggaggtaaaaatagaagaagaggaaagaatgagaacgaaactgaaaagag
agaattggtcttcaaagaagaagGACAAGAATATGCACAAGTTCTTAAAA
TGTTGGGAAACGGTCGTCTAGATGCCATGTGTTTTGATGGTACAAAAAGG
TTATGCCATATCCGGGGAAAACTGAGGAAGAAAGTTTGGATCAACACAGG
TGACATCATTTTGTTGGGCTTGAGAGATTACCAGGTAAGAATTTcagaaa
caaaaaagtcaaacaTTTTAAACTTTGTATGCACATCAAATTCTGTTCAT
TAAAAAATAGACACGCGGGTTTtgctgatgtttttttttccataCCGCAA
AAAATACCCACATCAAAGTGCTTTTATCAAGGTAGGGAAACCTGCCGATC
CGTAACTATTTTAACCTTCCCTCCTTAGGACAATAAAGCTGATGTTATCT
TGAAATATACACCAGACGAAGCTAGAAACTTGAAAACATACGGCGAATTG
CCTGATAATGGTATGTTAATTTTGCATGTTtccttctgattttttgctct
tctatttttggacctacctcggaggtcctttaaattaacctctgttcgtt
cgtttgtttgttcgttcgtctaCTATTACTACTTGCTTTTCTCGGGATCT
GcctattaattttttctgatgtaAAACGAGAGTACCCAAAAAGtatatat
taaaataaaaacttgtttAACATCTTTTTAGTCTCATTTTGTACTATTgc
agggggggtcaacatttataataccaacccatagcccaaaaacctgactt
ttgaccgtttgagctaagttaacaccaccaccccgaaattggtatcgata
ccaacttgaaaatcataattttcagaaaaaggggggacccacccccttat
tttggtatcgataccaacttgaaaatcataattttcagaaaaagggggta
cccaccccctttatttggtatcaataccaacatGGCTtcttgaatttgac
aaaatatcatgggacccactaatttagtaccaattaccaatctgacaaat
ttgagtttaaagctgtttaaaggggacccaccccctcccacacaaacagg
gtactaagagaaactccaaaaaaactcatttttgaaatactctttcttca
acacaacacaaaaaatgtcatgtgctaaaatagaaaatgactgaaaactg
acaatataacataataaaaacaaacccaatgaagctagcaaaatcaatct
gaatcaatgtTATCTGAatagaacagaatagattcactcattaccaaatg
ctatcacagaaaaaatatttttgcttcaggcttgatcaaaaataaaactt
gaaaatatcgaaaaagtccaaaattaacaaactgcaaagtcatttaaacT
TATTatattactcatttacagtcattatactcaaaagctagaacaaatcc
aattgaaacctgtttagactgatatgtaccccgggtattttctagctatg
aagggcaaaaattaggaaagttttgctgtcattttgatatggataccaac
tttctgaatcatattatttaaaaaaaggggtacccgccccctattttggt
atcaataccaaccgaggataactctttttttctaaaaaagggggacccac
ccccatcaataccaacttgacttttcagacttttaaaggaaaaaaagaca
ccaccacccggctatgggtctggtatctggatgttgacccccccccctga
ctaTTGTGGCcagtttttcctattttcttatTACATTAATCTGCAGGTAT
CAGTATGTAGCTTATTAGTTTTACGATTAATAGGACAAAGGTAATGAATT
TAATAATAATGACATCATTTGGTTATGAAAGAAACTCACTCACTCCACat
tctttttgtttgaaatcttGTTGTTCCTCTCTTTTTCAGTGAAAATTGAG
TCGAACATTAACAACGAGGATGCGAGTGGAGATATCGAATTCGAATTTCA
AGATGACAGCGAGGAGGAAGATGATGACTTGGATGACGTAAGCAAC Coding sequence (CDS) from alignment at sc0000187_pilon:310370..317515+ >XLOC_044335 ID=XLOC_044335|Name=XLOC_044335|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000187_pilon:310370..317515+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCCAAGAACAAAGATGCCCAAGAACAAAGgaaagggaggtaaaaata
gaagaagaggaaagaatgagaacgaaactgaaaagagagaattggtcttc
aaagaagaagGACAAGAATATGCACAAGTTCTTAAAATGTTGGGAAACGG
TCGTCTAGATGCCATGTGTTTTGATGGTACAAAAAGGTTATGCCATATCC
GGGGAAAACTGAGGAAGAAAGTTTGGATCAACACAGGTGACATCATTTTG
TTGGGCTTGAGAGATTACCAGgaaagggaggtaaaaatagaagaagagga
aagaatgagaacgaaactgaaaagagagaattggtcttcaaagaagaagG
ACAAGAATATGCACAAGTTCTTAAAATGTTGGGAAACGGTCGTCTAGATG
CCATGTGTTTTGATGGTACAAAAAGGTTATGCCATATCCGGGGAAAACTG
AGGAAGAAAGTTTGGATCAACACAGGTGACATCATTTTGTTGGGCTTGAG
AGATTACCAGGACAATAAAGCTGATGTTATCTTGAAATATACACCAGACG
AAGCTAGAAACTTGAAAACATACGGCGAATTGCCTGATAATGGACAATAA
AGCTGATGTTATCTTGAAATATACACCAGACGAAGCTAGAAACTTGAAAA
CATACGGCGAATTGCCTGATAATGTGAAAATTGAGTCGAACATTAACAAC
GAGGATGCGAGTGGAGATATCGAATTCGAATTTCAAGATGACAGCGAGGA
GGAAGATGATGACTTGGATGACGTAAGCAACTGAAAATTGAGTCGAACAT
TAACAACGAGGATGCGAGTGGAGATATCGAATTCGAATTTCAAGATGACA
GCGAGGAGGAAGATGATGACTTGGATGACGTAAGCAAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187_pilon | genome | sc0000187_pilon:310370..317515 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 340-444:7042 |
| Aaloc | 256-336:5529 |
| Aaloc | 19-255:5098 |
| Aaloc | 1-15:1 |
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