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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000187_pilon:440652..445374+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044331 ID=XLOC_044331|Name=XLOC_044331|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4723bp|location=Sequence derived from alignment at sc0000187_pilon:440652..445374+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCTCTAGAGTCCTTCATAACGTAGGAAATCGCTTGAATAGCATACG
TAATAACTTTTCGACTCTTCTTTGCGGCTCCAGAAGAGCTTCGAGAGATG
AAGATAATGTTCGATTAAGATTCGTCTGCAGATCTTGTGAAGATCACCTG
AATGATGTTGCTGGTAGCAGTGCAAAGATTTGTCAAGATACCACCATTAG
CtgttcttttgaaaatctattGGACGCCAGTACCAATGAAGTCAATGTAC
AACTGCTTGTCAACCAGTTCAATACATTTTACATTGATAAATCGCATGGT
GAGAAAGCAAAGGACTCGCCAGACATTGCCGAGAGTTATGAAAACTGTGT
TTTTCATGAGAGTGAGGAGCACCATGACAAAGAGAAAAAACCTTTATTTG
CACCGCCAAATCTTGATATCAACATAGATGAAAATAACCAAGATCAGTCT
TTAATCGATACTCTCCCACAGCACTATTACGGAAATGCAGATCACGAAAG
TGTTTTCACACAACACGCATCAGAGGGATGCGTGGAATTTGCAGATAGTG
ATAGTGAGCACGAATTATATATCTGGGCAGACAACAATCTTCCCTTATTA
GATGAAATCGACAAAGAACTTGAGAAACGCAATCTTGCTGACATAGCTAA
TGAGTTGTTGAGGTAATATTTTATCCGCACGAAAATATATTTATTCCTAC
TGTCAGTACACTTCACAAAGCACTTCCTTAGGAAGCCTCCTTATATACAG
GCAAAATTCAGAAACGTAGTACCCGGATGTCGAACAGTTTTTctactttc
tttaaaaattttatacaTTATTCAAAGTGGTACTTCAAATATATTCCCTT
TTGTAATATAGTAGGAAAGTGCGTttcttatgctgacaaagcaaaattaa
taaataaaactATTTGCGGTCATGTGGTACAGAAGGGAGAGAAAGttgtt
ttaacttttgtttgaaatacaATCAAAAGGTTGTAGTACAATTAGGTAAA
AATTCagtttaatttgattttcagaaatGATTACGAAGATTTAGAGGTTA
TCACAGAGGAACCTTCTGCCAAATTAATCAACAATATGCCCGTTGAACAA
GATGAAGCCATGTTAATCACACAAAGAAACCAAGAGAATTCTCGAAAAGC
AGTCGAGTACTGAGCGATCTTTTCAAGTCATctctatacaaaaaagaaaa
gcaaaaagaccTATCGAATGAGAACATCATAATGTTCCACCGCAGAGTAA
CTTGTGTTTTGAATCTAATCAAAGCAATTAAAACACTAGAAATCTTCAAA
TCCCACGACATCCAAAAACTCGAGAACACGCAAGCAAATTGATTTTGCAA
CGGTataaattgaaacttgaaaatattattaacACTTAGTTAATTGGTGA
GATTAGATATAATTTGATCGTTTTTccgatttcatttttagggcctgTCT
TCTTTGGAATCAAGATGGAGCAAGAAGCGaagactttttataagaataaa
aagaCTCATCAAGCATTTGCTttgcgtttgttttttttaccaaaGCTGCG
AAGATCACATGTCAGAAGGATAAGcgataggctacgtcatatcttccttc
gtttcgagcgtaaaactcttactaagtaaggcctaaaagcctggagctgt
ctattgtgtagactagatAAGCGAGCAATAGAAGAACATAATAGTCTGCA
CAACACACTCGTATCACAGAACGCGGTGGGGGACCTACAGCagaaaattt
ctattgcaaaatatcttaacggggaagaaaatttgaGGTTTTAAATGGTC
GGGGAAAAATTGCGACGGGTGTACTTTTGTTAACTCttcgaaattttcat
catttcccccaaaatttttcaagtttatccCCTTTGGAAAGTTCTATCGG
CTATCTGAACCCCTCAGAATGACTTAATTACTCAATATGAAGTTTTTGTC
TCCCCAATTGGAACTTTTATCCTCTCCCCATTGagtaaaaaattcatcaa
taacTGCGACATATATACCTCTCCGATGTCACTAAACTGTGAATCAAACG
ATCAAGAGTAAGGATTAATTATATTCTGTTTGGCTTTTTTAATAGCCCCC
GATATATGTGGACATAAACGGATGATATACATTGTCCCGGGACATTTACT
AACACCATAGACGtacattttctatatttcatatataatagaacacccct
ttctcagtgacccagtgaagttttgaaacccGCCGTGTCTTAATATAGGA
TCTCCAAAGCTCACTAAGTGATAACCTTTAACTTCCTCTGGTagggaaaa
attgactttcaactAATATTcaagaattcttaaaaaaactgagatTGACC
GGGGTAAGACGGTAAGACCATAAATAAGATCTTTGATTTGGGTCTATGCA
ATTTCTTTCACCGGGTAATTCATCATTGAGTGGAgctgaccgggtcactg
atataggggtgtaataaaagaatttgtATACATAATCTCCTTGATACAAT
CGGGTGCATAGTTCTTCGCGCTTCGATGGTGAACAAACGATTTTTCTGTC
GTGTCTTAGTCAAGTTGACAATCAAGAGTCATGTCTACCTGAGAACGATC
TCGATTATCGGTTCACCCAGTGGTCCCTATAAAAGGCAACGAATGAATTA
AAAAGAGTTGTCATGAAACTAATTTTGCGGTATATTCAGGGCTTCATTAG
ATTATTGAGCTTATCTTTAGATAGAAGTCAACGACCTTAAATAGGGGCGt
gtatgaaaaaattattttactagaAGAAAAGATATATATTAAAATGGTAT
AAAGGATGACGATAAAACCAGGTGAAACATTCGAGAACGAAATACCTTTT
CCTAATTAATGTTGTATGTGCTATGACGATGCGTTGACTTCTCGATCCGG
GATACTTGATAGCTCTACCATTATTCGGCAAGTCCATTTGGAATATCTAG
AAAGAAAAgcaatatattcaaattattttaatcttcaacTGGCAAAACCA
CATCTTAATACCGATCAAATATGAAACAGTTGACACACAACAGCGTTTCA
AAACctttctaacatttttaaatGTCCATCATGTGGCGTTAGAAGATCTT
TACAGTCCCCAAATCGGTGAAATTCTGTACTCAAATACCTTACGTATCTG
CCGCTTTAGGTGGATTAAACTTCGCGTGGAGTAATTGAAAATGGCATCGA
CCTCTAACTTCGCGTGGAGTAATTGAAAATGGCATCGACCTCTAACGTTA
GAGGTCGATGAAAATGGTAAATTCGTAATTTTCATgagttttggcccttt
tcgcaaaacttagtttttcctataaattgaaaatccgttaaaactaaaga
aatttggTGAAATCTAGTGAAAAAGAGGCTGCATCGCagcgaatttttta
aaattctcaatTCTCTaaaaaaaaGTACATGCGAAAATTAATCGACTTAG
GGTAATAATAGCGGTATTCTAAGTCGCGCCATTAAGACAAAAGTGACGAG
AAATTAAAAACTCCCACTCGCACAAGACAGAGATGTAATGTGTATTCCAA
CAAGGATATGATGTGTATTTCCttcgttgtgagacagggaGATAGGAAAG
CAAAACATCACTCACACACTtgcatgagacagggatgtaatatgGTATAT
TTCCTTTGTTGTGACACAGGGAGGTGCGAGAGGCGGGAGAGCTAAAATAC
CACTCGCGTGATACAGGGATAATACGTatctgataaaataatatttcttc
cCACTATTTTACCGAGCTTTTTACGTTGCCTTAATATACATTAATGCTTG
CaagaaagcataaaaaagcaagCTTTTATCCCCTATTGATCGTGATATAA
AGAGGGCCTTAGATAATATCCTTGAACTCATTCGCATGTCAATGACCTTC
TTAAAGTAACTCTCACAGGAATCTGCGAAGACGTCATCCTAATAGACgta
ataaaaaacttaccattGTTGAAAGAATAACTTTTCGTAATCACTTGGGA
ATATAATTACTACTTGCATCGTGTTTACGCCATATTTCTCATCTCTTCAC
TTTTTCTACCGTGTAGGAGTGCCAAACATGAGATTTCtataaggaaattt
gaaaaactccaccacagaaatattttcaatattttgctcaatttttcgaC
TGCAAGTTGTGGGGTAACAGAAATATATATCAATGTGTTCCTTATAAGAG
CCGCTAAACGAATAtcgtatttttgttttcaccacGACGTGTTATTGAAC
Gttttaagtactttttgttttaagcctttgatctttcttttttttctttt
gtttagcgtGGCGCTAAATGAtgtgattactcatttttttgtcgtttaaa
ATATGACAGTGTGCTCGACTGAAAAGACCAGGAAAGGTTTaccaacaaaa
aagaaaaaatgaagcattTGCAACAAGAACTTTATTCTAATTCTCCAATG
TTGAGCCACAATGGAATCTTATCTGAATTTTTCGTTGACATTTACAAAAC
GCCAGATGTAACAGATTTCATTGGCTGCATTTCAACAATGATTGAGAAAC
ATACATGCTCTCTTGCAGAAGGAAAGTACGGTCCAGATGCAAAGATTTAT
CAAGACTTATTTGATGACTTAGTTATGCCTTTGATGCGCAAGTATTTTGA
CTTGGATGGAGATATTTTGTTGCGTGCAGCAATAAAGGTTGCCAATGATT
TAAAGAAGAGTGGCAAATTGTAA Coding sequence (CDS) from alignment at sc0000187_pilon:440652..445374+ >XLOC_044331 ID=XLOC_044331|Name=XLOC_044331|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2268bp|location=Sequence derived from alignment at sc0000187_pilon:440652..445374+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCTCTAGAGTCCTTCATAACGTAGGAAATCGCTTGAATAGCATACG
TAATAACTTTTCGACTCTTCTTTGCGGCTCCAGAAGAGCTTCGAGAGATG
AAGATAATGTTCGATTAAGATTCGTCTGCAGATCTTGTGAAGATCACCTG
AATGATGTTGCTGGTAGCAGTGCAAAGATTTGTCAAGATACCACCATTAG
CtgttcttttgaaaatctattGGACGCCAGTACCAATGAAGTCAATGTAC
AACTGCTTGTCAACCAGTTCAATACATTTTACATTGATAAATCGCATGGT
GAGAAAGCAAAGGACTCGCCAGACATTGCCGAGAGTTATGAAAACTGTGT
TTTTCATGAGAGTGAGGAGCACCATGACAAAGAGAAAAAACCTTTATTTG
CACCGCCAAATCTTGATATCAACATAGATGAAAATAACCAAGATCAGTCT
TTAATCGATACTCTCCCACAGCACTATTACGGAAATGCAGATCACGAAAG
TGTTTTCACACAACACGCATCAGAGGGATGCGTGGAATTTGCAGATAGTG
ATAGTGAGCACGAATTATATATCTGGGCAGACAACAATCTTCCCTTATTA
GATGAAATCGACAAAGAACTTGAGAAACGCAATCTTGCTGACATAGCTAA
TGAGTTGTTGAGATGGTCTCTAGAGTCCTTCATAACGTAGGAAATCGCTT
GAATAGCATACGTAATAACTTTTCGACTCTTCTTTGCGGCTCCAGAAGAG
CTTCGAGAGATGAAGATAATGTTCGATTAAGATTCGTCTGCAGATCTTGT
GAAGATCACCTGAATGATGTTGCTGGTAGCAGTGCAAAGATTTGTCAAGA
TACCACCATTAGCtgttcttttgaaaatctattGGACGCCAGTACCAATG
AAGTCAATGTACAACTGCTTGTCAACCAGTTCAATACATTTTACATTGAT
AAATCGCATGGTGAGAAAGCAAAGGACTCGCCAGACATTGCCGAGAGTTA
TGAAAACTGTGTTTTTCATGAGAGTGAGGAGCACCATGACAAAGAGAAAA
AACCTTTATTTGCACCGCCAAATCTTGATATCAACATAGATGAAAATAAC
CAAGATCAGTCTTTAATCGATACTCTCCCACAGCACTATTACGGAAATGC
AGATCACGAAAGTGTTTTCACACAACACGCATCAGAGGGATGCGTGGAAT
TTGCAGATAGTGATAGTGAGCACGAATTATATATCTGGGCAGACAACAAT
CTTCCCTTATTAGATGAAATCGACAAAGAACTTGAGAAACGCAATCTTGC
TGACATAGCTAATGAGTTGTTGAGaaatGATTACGAAGATTTAGAGGTTA
TCACAGAGGAACCTTCTGCCAAATTAATCAACAATATGCCCGTTGAACAA
GATGAAGCCATGTTAATCACACAAAGAAACCAAGAGAATTCTCGaaatGA
TTACGAAGATTTAGAGGTTATCACAGAGGAACCTTCTGCCAAATTAATCA
ACAATATGCCCGTTGAACAAGATGAAGCCATGTTAATCACACAAAGAAAC
CAAGAGAATTCTCGAAAAGACCAGGAAAGGTTTaccaacaaaaaagaaaa
aatgaagcattTGCAACAAGAACTTTATTCTAATTCTCCAATGTTGAGCC
ACAATGGAATCTTATCTGAATTTTTCGTTGACATTTACAAAACGCCAGAT
GTAACAGATTTCATTGGCTGCATTTCAACAATGATTGAGAAACATACATG
CTCTCTTGCAGAAGGAAAGTACGGTCCAGATGCAAAGATTTATCAAGACT
TATTTGATGACTTAGTTATGCCTTTGATGCGCAAGTATTTTGACTTGGAT
GGAGATATTTTGTTGCGTGCAGCAATAAAGGTTGCCAATGATTTAAAGAA
GAGTGGCAAATTGTAAAAAAGACCAGGAAAGGTTTaccaacaaaaaagaa
aaaatgaagcattTGCAACAAGAACTTTATTCTAATTCTCCAATGTTGAG
CCACAATGGAATCTTATCTGAATTTTTCGTTGACATTTACAAAACGCCAG
ATGTAACAGATTTCATTGGCTGCATTTCAACAATGATTGAGAAACATACA
TGCTCTCTTGCAGAAGGAAAGTACGGTCCAGATGCAAAGATTTATCAAGA
CTTATTTGATGACTTAGTTATGCCTTTGATGCGCAAGTATTTTGACTTGG
ATGGAGATATTTTGTTGCGTGCAGCAATAAAGGTTGCCAATGATTTAAAG
AAGAGTGGCAAATTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187_pilon | genome | sc0000187_pilon:440652..445374 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 784-1134:4373 |
| Aaloc | 664-780:1026 |
| Aaloc | 1-660:1 |
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