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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000250_pilon:236873..241661- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044319 ID=XLOC_044319|Name=XLOC_044319|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4789bp|location=Sequence derived from alignment at sc0000250_pilon:236873..241661- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCTTTAATTTTGTTCTTTATTGGTATGGCTTTATGCAATCTATT
CTCAGGTATGGTTTCTAGGTCAGATTTACTACGAAGAGTTTCTGGAACAT
TTTTTAAAATCAGCCCTAGCGAATACAGGGATAATTTCCGACACAGCTGG
CACACAACGTTGTTTCAACGTTCACCTAACGTTATATTGATGTTGTGAAC
GTTAGATAAACGTCGAAACAAAGTTAAGTGCCAGCTCGGTAATTATCTCT
TGGTTTTAGCCCTAAGCCACCCCTAACCCCCATAAATATTACACTTGTAA
ATATTACTACCTTTCCTGTTAAAATTTGAGCTTCCTTTTTTCTTCCTAAG
TTTCCTTTAGGCTCATTCAAGTCATAAATCAAAAATTTACAAAATATTTT
CATTTACAGGTTTACAAGCAGTTCCAGTTTCTCAAAATAAAGACGATGTA
GCATCGAAGAACGAAACTAACAAAAATATTATCCAGTTTTATGATGAAAG
ATTTGATCTTTCGGAACTGAAGTTGGCTGGTGATATAATGTTTTCTGAAG
CACAACTCAACGATGAAGTTAACGATGATGATAAGAAAAAAGATCGAAAC
CGTCGGCGTCGTGATACTGTCGGCCCTGTTAGGCCAGTGGCGACATGGAA
AGACGGAGTGGTGCCTTATGTATTTAACTTTGGAATGAGTAAGTATGAAA
CAGTTTTTGAACAATATTACAAGCTTAGCTCCAAGGATATACCAACACAA
CCATAAGACGACCATACATGGCCTTGTAAAAGTTTCATCAAATAGAGGCA
GTAAAACGCGACCCACGTGACTGAATGACTTATTAAAATTTTGACTTTTT
GGCTACTTCAGAGAAAAGCACGCCTTTTTTCTTATAATACAAGCCCGAGT
TACAACTCTTCCTTACTCGGCTTTTTTATAAAACCGTATTTATAACTCGT
TTACTGTAACTCGCCTTTTCTGGACGTAAGTTTCCGACGAACTGAGATAG
TTTCAGTTAAATAAATATGATAGTTTCTTTTTAAATGAGATAGTTTCGTT
TTAAATGAGATAGTTTCGTTTTAAGGGAAATAGTATCCCCTGAATGAAAC
AAAGTTTCTTTTTAAACGAGATAGTTTCGTTTTAAATGAGATAGTTTCGT
TTTAAATGAGATAGTTTCTCCTGAAATGAACTTAGTATATCCCCTGAATG
AAACATAGTTTCTTTTTAAGGGCTCTGACCATAGTGAATTTTTCATAATT
GCCGTGTTTAAAAAATGTTTTCTGACTGATGTAACCAACAAAACTATGGC
ATGTTATACATTTTCTGTTAGACAAACTATTCCTGAATCTGAAAATTCAA
AAATTGCATTGAAAAAATTTGATGAAGAAGAAAATGAAGACTTTTGCGAG
GAAGAGTATTTCAACTTTGAAGAGCTTAGTTTCGGCGAAGAAAAAATATT
TTGAAAAAATTTTCGCAGTAGATGGTGTATCTTTTACTGAACAATAAAAA
ATTTTGCGGAAAATTTTTGAAAATGCTTCTTTGTCTCGAAATCTTCAAAA
TAGTGGTTTTTCATCAATTTTTCATCTGGATTTTGCTTAAAAAAACAGTC
ATAACTTTTGACACATCTTTTTAGAAAAATTTTCCGCAAAATTTAAAATA
GTTCAATTCTTTGCAGACAGTGTAAAGAAATTTTGAAACAAAAAAGTTAA
TTACCCATTAAAACTAAGCACTTTTTCTAAAAGAGGGTGATGCAACATAT
TATTAACATCTTTTTAAAGTTCATAACGTCATTTTTGCAATTAAATTCTT
AATTACTCTTAAGGGATTCGATTAAAAAGCAATTTATAAACGCAATTCTT
TGTTAAAAGTGTTAAGGAACCTGAAATATAACTTTTATGTTCAAATACCA
AAATCAATTTTTGGACTATGGTCAGAGCCCTTAAACGAGATAGTATCGGT
TTAAATGACATAGTTTCGGTTTAAATGATATAGTTTCGTTTTAAACAAGA
AAGTATTTATTGGCGCTTCCGCGCGCCATAGAAACCTGCTGCAACATTAA
TCTACTTTTTAATCCATGTTTTCCTTTGGTGTGGTTTAGAAATTAAGACA
AAGACGGAAGACAATTTTAGTTCCAATCAATCAAATTTCAATTTTCTCTT
ATAAATAGCTGATGAGCAGAAAAAGAAGATTAAATGGGCAATGAAAATTA
TTGAACGAAGATCATGCATCAAATTTCAAGAAACAAGTTTCACGGATCGA
CCAAAACATTTCCTGGCAATTACAACCGGCAACGGGTAAGCCCCAATATT
ATATACAGTGGAATCTCCGTAACTCGAACATGCACGGGGAACACAAATTT
GTTCGAGATACGCAGTATTCATTTTTCCCTTATCACTTGTCGTTGTGTTT
CTGAGACAGGGGTGTACAAAACAACACGATCCAATAAGTTTATTCAGACA
ATCAATATTACAAAAAGGAAAAAAAAAACTAACAATAACTATGATTTAAG
TTTTACGAAGCCAGAAGTTTGGCAACTGACTATGGTCGGTGTAGATTGTT
TAGTGTTTTGCCAAGAAAAACCATAGGTCAACCCCCTTGTTACTGTACTC
AGGAAATGCGGTATGCAGACATCCGCGGTAAAACAATCAAAACAAATAAT
TTCATTGCCAGACAAATAGTGGGGACGTACGTGGGTCCGGGACACCGAAA
TACCGACACATTTTTGTTTATCACCAAAATACCGACGCAAAAAAGGTCAA
TACCGACACACCGATAAACTGACCCCCCCCCAAAATATCGTTATGCTGAG
CAACCCCATACTCAGTCTTTTTAAAGACCTCTTTCGGTTTACTGATACGC
AAAGAAGGGGAATCTTTTTACGTCAAGACCTATCAGTAACAGTCGAAACT
ATCTTGGTTAAACCTGGTTTCTTACCATGTTCTTGGGTCCTTCTCGTTGG
TCAGATGCAAAACATTCAAATATTTGGATCAAGTCCCCAGAAAGTTTATC
AGAGCGCAGTGGTCCTAACTATCCATGATTCCGTTTGACAGTGAAATGGC
TTTAATGTTTTTTTTACTTCTACAAACATTTTTTAGTACTTTTTACAAGG
TGTTTCTACGGGGCTACACTCTGTAGCACAAAAGTGTATATATCAATTTG
TAATTAAAAGCTTTGATAAGCTTTTGATCAAAAGTTTCTAATGTTTTTTA
ATTTCAGGTGTTATTCTACTGTCGGATCAAGCAACTTTCCATTGAATATT
TTATCGTTGAAGTTTCCAAATTGTTTTGATTGCTCATCTATTGTACACGA
ATTATTACATGCCCTTGGCTTCTTTCATGAACAGCAAAGAATGGTAAGAG
ATTTCGGGACCAAAAAATACCATTATTCTTCTTTAAACTATTCCCTGATT
TAAAATTTAACCATTTTAATCCAACTTGATTTTGAGACGTACGGGTTTAC
ATTAATTTTTTTCACCAAAACAAACTGACATAACTTAAACCTCTATCTAA
AAAAGTATGGTTTGTATCATTATTTTCAAATTTGTGCTTTTAAAACACTA
CGTCGTGGGACTTGCAGATATGAAATAGAGGCATATATTCCAGTGGCACA
TCTCTGTACCTCTTTGCGCCAAAATCTTCTAATAAACGTGGGAGGGGGGT
TTGAAATAAGAGGGTGGGTGAAAAAAATCTCAAACCTCAATAAGGGGGGG
GGGAATAAGAATGTCCTGAGAAGAAAATTTTCGAAAATTAATTAGCGGGG
AGGAAGCTTATTATGTACCCAAGAGTAGGACAAAATTGTTCATGTAAAAT
ACAGAGTGTCTGTTACAAAAAGAAGATTCTTTCTATTCATCTAAAATAAT
CACGACACCCTTTTTACGGTTTTTAGGTTCGGGACAAATACGTCAAAATT
AATTGGAAGAATATTCAACCAGGGCAACAATACAATTTCAAGAAAGTCAA
ATCATTAGTAGATACAGATCAAACCTATGACATGAGAAGTCTAATGCACT
ACAAATCGTAAGTAAATCGATCAAATTCGTTTCTAAATATCTTTCCAACA
AATCACCTTTAAACCCTTGAAGCTTAGACGAGACTGGGTTAGAGTTCATC
AGATATCTTGATGCTTTGGATAAAGAAAAAAGTACTTATTATAGCTCCGG
TTGTTATTACGTGTGCAATTCCTTCTATAGGCTAGGTATTTAGATTTCTG
CTCCGGGGTACTAGGGTTAGGGAATTTCTAACAAAGTGAATAAACTATGG
ACAGACTCTATGATATCACACTCCAAAGCTTACCACAGTGAAAACCTACT
GACCAGGATAATGTGAACATTTTTACAAAAGTATACTACTTGTAAGATTC
GGATAAGCAGTCCATTTTTCACTCATCGGGGTTCAACTCTCTCTAACTCG
AACTCCTGTCATTTTAATCTCTCCGTAATTCGACTAAAAAATTAATCCCC
TCAACTGGAAAATGGTAGAAAATACTCTCTGTAATTCGAAAATTACTCTA
ATTTTAAGAAGATTCGGTCCCTTGAAGATCGAATTAGAGAGTATCAACTA
TATTGAAAAGAAAATACAACTGGTGAAAAGAACTGTAAATCTGATCTTCA
TCTTCTTCTTTTCATAGATACGATTTTTCGAGTAATGGGGAACCAACAAT
TGAATGTATAAACGCAGATGGTACTGCTTGTCAACTTGGTGGGAAATGGC
TTCGATACTCTGATACAAAAAAACTGAATAAAGTTTATGGATGTAAACCT
AAAAGATTCGGATACTCATCACGTTATAATAACCAATAA Coding sequence (CDS) from alignment at sc0000250_pilon:236873..241661- >XLOC_044319 ID=XLOC_044319|Name=XLOC_044319|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1800bp|location=Sequence derived from alignment at sc0000250_pilon:236873..241661- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCTTTAATTTTGTTCTTTATTGGTATGGCTTTATGCAATCTATT
CTCAGATGGCATCTTTAATTTTGTTCTTTATTGGTATGGCTTTATGCAAT
CTATTCTCAGGTTTACAAGCAGTTCCAGTTTCTCAAAATAAAGACGATGT
AGCATCGAAGAACGAAACTAACAAAAATATTATCCAGTTTTATGATGAAA
GATTTGATCTTTCGGAACTGAAGTTGGCTGGTGATATAATGTTTTCTGAA
GCACAACTCAACGATGAAGTTAACGATGATGATAAGAAAAAAGATCGAAA
CCGTCGGCGTCGTGATACTGTCGGCCCTGTTAGGCCAGTGGCGACATGGA
AAGACGGAGTGGTGCCTTATGTATTTAACTTTGGAATGAGTTTACAAGCA
GTTCCAGTTTCTCAAAATAAAGACGATGTAGCATCGAAGAACGAAACTAA
CAAAAATATTATCCAGTTTTATGATGAAAGATTTGATCTTTCGGAACTGA
AGTTGGCTGGTGATATAATGTTTTCTGAAGCACAACTCAACGATGAAGTT
AACGATGATGATAAGAAAAAAGATCGAAACCGTCGGCGTCGTGATACTGT
CGGCCCTGTTAGGCCAGTGGCGACATGGAAAGACGGAGTGGTGCCTTATG
TATTTAACTTTGGAATGACTGATGAGCAGAAAAAGAAGATTAAATGGGCA
ATGAAAATTATTGAACGAAGATCATGCATCAAATTTCAAGAAACAAGTTT
CACGGATCGACCAAAACATTTCCTGGCAATTACAACCGGCAACGGCTGAT
GAGCAGAAAAAGAAGATTAAATGGGCAATGAAAATTATTGAACGAAGATC
ATGCATCAAATTTCAAGAAACAAGTTTCACGGATCGACCAAAACATTTCC
TGGCAATTACAACCGGCAACGGGTGTTATTCTACTGTCGGATCAAGCAAC
TTTCCATTGAATATTTTATCGTTGAAGTTTCCAAATTGTTTTGATTGCTC
ATCTATTGTACACGAATTATTACATGCCCTTGGCTTCTTTCATGAACAGC
AAAGAATGGTGTTATTCTACTGTCGGATCAAGCAACTTTCCATTGAATAT
TTTATCGTTGAAGTTTCCAAATTGTTTTGATTGCTCATCTATTGTACACG
AATTATTACATGCCCTTGGCTTCTTTCATGAACAGCAAAGAATGGTTCGG
GACAAATACGTCAAAATTAATTGGAAGAATATTCAACCAGGGCAACAATA
CAATTTCAAGAAAGTCAAATCATTAGTAGATACAGATCAAACCTATGACA
TGAGAAGTCTAATGCACTACAAATCGTTCGGGACAAATACGTCAAAATTA
ATTGGAAGAATATTCAACCAGGGCAACAATACAATTTCAAGAAAGTCAAA
TCATTAGTAGATACAGATCAAACCTATGACATGAGAAGTCTAATGCACTA
CAAATCATACGATTTTTCGAGTAATGGGGAACCAACAATTGAATGTATAA
ACGCAGATGGTACTGCTTGTCAACTTGGTGGGAAATGGCTTCGATACTCT
GATACAAAAAAACTGAATAAAGTTTATGGATGTAAACCTAAAAGATTCGG
ATACTCATCACGTTATAATAACCAATAAATACGATTTTTCGAGTAATGGG
GAACCAACAATTGAATGTATAAACGCAGATGGTACTGCTTGTCAACTTGG
TGGGAAATGGCTTCGATACTCTGATACAAAAAAACTGAATAAAGTTTATG
GATGTAAACCTAAAAGATTCGGATACTCATCACGTTATAATAACCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000250_pilon | genome | sc0000250_pilon:236873..241661 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 730-900:172 |
| Aaloc | 598-726:914 |
| Aaloc | 463-597:1582 |
| Aaloc | 337-459:2630 |
| Aaloc | 58-333:4379 |
| Aaloc | 1-54:4790 |
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