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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000250_pilon:249835..255467- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044318 ID=XLOC_044318|Name=XLOC_044318|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5633bp|location=Sequence derived from alignment at sc0000250_pilon:249835..255467- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGCAAGACAACAATTGAACAATTTTAAAGATGCCCGCCAATGTCC
TGTAAGTTGCTTTCAAATGCTTCAGGAAGTGTATTTGTGTCGAATACTGC
TGTATCTATCAACTCTTACATAGTTCTATTTCAAATGTTCTTCTCCAGAA
ATCGGATAGAATAGCAACGCTGCAAAATTCCGCAATTTTAGCTTTATCTA
ATTCCGCAACGTTATTAGATTTCACCCCTGTGGAAGCGTTTCAAAAAACA
TTCAGCTGAACTTCTATTGAAACTTTGCTATGTACCACTTGCAAGCCATT
TAATAACAACGTCAAAATAACGCACATCCAATGTTATTTGAACGTTAAAA
CAATTTGTCTTTTTTCCACCCGGGATAGCTAACTACGTAGAAATCTAAAC
TTCGAAACTATCGAGTTCATTTCGTGGTATTTTTGTCGAAAGTAAAAAAA
AAAAAAAAATACAGAATATATCTCAATTGTTTCTTCTTTAAATATAGTTC
CAACTGACCACGGAGACTGGTGCTCCAATGGAAACCAAAACAGCCACAAT
GACCCTTGGCCCAAGAGGTCCAGTCCTCATCCAAGACAACAACTTTATTG
AGGACATGGCACGTTTTGATCGTGAACGTATCCCAGAACGTGTCGTGCAC
GCGAAAGGGGCCGGTGCCTTCGGATATTTTGAATGTACTCATGACGTGAC
TAAATACACCAAATTGGCACCGTTCGCTCAAATCGGAAAGAAAACTGATG
TTTCTGCCCGATTCTCAACTGTTGGTAAGATTTTTTTAAGTGGGTTATGT
ATTTATATACCAAGTTTGAGACTGGCTGCTCAGCTACTTGGCTTATTGAG
AAGTTATTGATATTCTTGTTGTAACATAGCCTTGACATTATCAGGATGTT
ACAAAAAACCCATCCTTTCAAAACGCATTACTCATGATCTAATCTAGAAT
TATGAAAAATCTTTTTGAATTATTGTGAGTGACTTTAGCAATTCAACTTT
TGAGTTATTCATTAACGATACGGAATTTTAATATCGAGTTTAGTTAACTT
TGTACGTTATGGGACACCTTTTGTTCAAAACTTTTCATGATTTCCTTCTT
TCAGGTGGTGAATCAGGAAGTGCTGACACTGCTCGTGATCCACGTGGTTT
TGCTGTCAAATTCTACAGTGAAGAAGGAAACTGGGACCTAGTTGGAAACA
ACACGCCCATCTTCTTCATTCGGGATCCAATTCTTTTCCCAAGTTTCATT
CACACTCAAAAAAGAAACCCAAGAACTCATTTAAAGGTATATTTTTAGAG
AAGGTTTTACCGTTCTGCATCATCTCATCATTATCTCTTCTCTTTGGTCT
AAAAGTGAAATCTACTATGTTTATTCTCTCACCCTTATCATATTAGCCAG
TTAGTTATTTTTAGTGTTGTTGATATGTTTAAAATCAGACAAATAACAAA
GACCATACCTTTTTTTCTACAAAGCCTACCCTAAATAGTTTTCAAATTTG
ATCATTATCTAGGACCCTGACATGTTCTGGGACTTCATCAGTTTGAGACC
AGAAACGACACATCAAGTGATGTTTTTGTTCAGTAACCGTGGAACACCAG
ACGGTTATCGTCACATGAATGGATATGGATCTCACACCTTTAAATTGGTC
AATGCTGAGAATGAGTATTGCTGGTGCAAATTCCATTTCAAGGTATAATA
TCAATATGAATCTCAAATCGTTCTTAAATACAATATTGTCGTTAAAGCTG
AGGTGTGCTCCTCCATCCTGCCATTTTCTCGGAGTAGTAAATAATCCAAA
TTTCTCCTTGAAGCTTAATCTGAACTCTGCTTATTCAGCATTATTTTCCT
TATGCTACACGCCCTTACCAAAAGAAATTACATATTATCAGACATCGCTT
TTTCCTAAACAAATAATCAAACGTTCACAATTCTCCTTTTCTAGACTGAC
CAAGGCATTAAGAACTTTTCTGCATCTGAAGCTGAAGTTTTGGCTGGAAG
AAATCCTGATTACGCCATCCAAGATCTTTATAATTCCATCGCTAAAGGAG
ACCATGTAAGAAACAAACATGACCTAATAATGTCTAAAGGAGACGAGATG
GAGCTTTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAACCAGTAATAG
AACAATTTTGTTACTTTTTCTAAAGAACGCGTCCTTTTTATCATTTCAAA
TGACCAATTATTAAAGTATCTTATAAAAACTCTAATCTCATCTGGTCTAA
AGTCATGGTGCAATTATGTATAATTATGAAGGTTTCGCTTTATTTTTCAC
TTTACTTTTCGCGTTCTGCATGCATTAGAAATATGAACTCTGAATTTTCT
TTTACTGAGAGATCTCTTTAACGCTTTGACAACTTTTTACACTTGAGCCT
GACAATGATTTAAGTTACACTTTACGATCAGAATTTTAACTTAAAGGTTT
TACTTTTACATAAGTGTTCCCGTTTCATGTTGTTAGATTATGCTGATGTA
AGCAAAAAATGTTTTTCTTTTCCTCTTTTTGACCAAACTTGCTCCACATT
CGTGTCGATTCGATGTGAAAAAAGCCTGCGAATTAAAATTAATGAGTAAG
TAAACGCTATCACTCTTATTTTAAAAACAAAACCTTTAACGAAAAACTAA
TTTGAATTTCTTCTTTGATTCTTTTCAGCCATCATGGTCATTACAAATTC
AAGTGATGAGCAAAGAAGAAGCAGAACAAGAAGAAATGAACCCCTTCGAT
TTGACCAAAGTAAGTCTTCATATATGAATCATATTGAGCTGATATTATAT
ATTCTTTGTCTGAAAACCTTTTATTTTACGGCAAGAAACTTATAATTGCT
GTGCTAAAATCGGCTAACTGATGTTTAACCATAGATATTGACTGCGTAGA
CATTATCATAAATTACATTTGTCTCTTTTTTATTTTTAACAGAGACCTTT
CAAAATCATACTGACTGTCTAACACGAAGCAGCGGCAATTTGTGTTACGA
TAAAAAAAAAAGACTTCGCACACCGACTATGGTTATTATGGACCTTTCCC
GAACCTTCCTAATCCGAAGTCTTCTATTAAATAATCAATATTCTTTTGTT
TTTCAACAATAGATTTGGTCACATGAAAAATACCCAATGATTCCAGTCGG
AAGATTGGTGTTGGATCGCAATCCTCGAAATTACTTCCTTGATGTCGAAC
AAAGTGCTTATTCACCAGCTCACATGATTCCTGGTGTAGATTCTTCCCCT
GATAAAATGTTGCAAGTATGTTCTATTTGTTTTGTCCTTGAGTTTTCCTG
CTTATTACTCTAGTAGGATTCTTGAAAGAAGATTTGGCTTAGTCTATACA
ATAGACAGCTCCAGGTTTTTAGACTTTACTCTAGAATGAGAGTTTTACGC
TCGTTAAGCAAAGAAAGATATGATGTACTTTAATTTGGCTGTGTTCTCCA
AAAGATGATAAAATCTTTTTGTCTAAATGTTGATAATAATTTTTATTTGA
TTTTTGCAAGGAGATGTTTTACTATCGTTTTATTTATTTTAAAGGTCTAC
ATAATTTTATGATATAAATTTAATAGTAATTCTTTCATATAAATTTATAC
CTTCAGTTCTCTATACTATTAAGCTAATAAGCTAAGTTGAATGCCAACCT
TGCGGTTGAAAAAAAAAGAAAAATCTGCTATATCACCATAGTAAAACGAA
GAGAACTTTCTTATGAATTTCAAATATCTTTTTTCATAGGGACGTTTGTT
CTCTTACGGAGACACTCACCGTCACCGTCTCGGTGCAAACTACAATCAAT
TACCTGTCAACAGACCACGTTGCCCCGTACGCACGTACGCACGTGACGGC
CCACAATGCTTTGAACAAGACGATGCTCCAAACTATTTCCCAAACAGCTT
CAGTGGGCCGCAAGAACAAAGACAAGAAGCTCATGTCGGAATCAAGGTAA
TTTTCAAACTATACCATATCATACTTTGGAAGCCTTCCCAGCAGACACAC
AACGTTATTTCAACGTTCATCTAACGTTATATGGACGTTGAAACGACGTT
GTGTGCCAGCTGGGTTATTCAACTTTCTGAAAAATACCTTTACTTTAACC
GTTCATTAGTTCATCACCAGTTATTGATTTTTTTGTTCTTTTTTTAGCAC
GAGGGCATTGAAGGGCGTTACCAATCCAGTGATGAAGACAACTTCAGTCA
ACCAGCTATCTTCTGGTCTAAAGTTCTTGATGAAAAAGAACAGAATGACT
TGGTTGCCAATTTGGCTGGTCACTTGAAGGATGCACAGAAATTTATCCAA
GAAAGAGCTGTATGTATTTTTGTTCAGGTTTTAACAATCTCATACCTTCC
TCTAAACAGCATTGAATCTACAGCCGATTGGTGATGCTTTGATGATTTTG
ATGATATCAAATGAGCTCTTACCCTTATTTGCTGTTTTCACATTTTGATT
TTATTAAAGGCTTTTAACTAAGTAAGTCTGCAATCACAGTTGGGGGGGGA
CCCGAAGGCTTCTATTTCGATAGCTATATTTATCTACCTGAAGGTAGGGG
AGGGCGCCACTCTTTCTCCCTGGATTGCTCCACTTACCCTTGATCTGTCT
CTCTTAAAAGCAGAGATGCATCAAGTACCATTATGGGAATCTTCGGTATG
ACCCGACTGGGGCCTTGCGAACCGTAGCCGGATGCTCTTCAACTGCACTA
CGGTCGCTTAGAAGAGTTTTACGTATGGATGTCTTTATCGGAAGGGCTGT
ATAAAATCAAGTATGCGAATATAATTAAATATCCATTGTTCTTATATTTT
CTTATCTTTTTTTTCGTTGCAGATTGGCAACTTTGCCAAAGTCAATGTTG
ATTTTGGACAAAAACTTCGTGAAGCAGTTGTAAGTTGCTTGTCTATTTCC
CATAATTTCTGTAGAAAACATATGCCTGAAAAGTGAAACGAATTTTCCCA
GGATAAGTTGTTCTTGAGGGTGTAGATGAATTTTTTTTTCAATGATATGC
CCGCAGACACTTTTTGCAAAAGTCGTTACTAGGAACCATAGCTATTATCT
CTTGGAGAGTACAGAATTAATGAATTATGATTTTTTAGATCTCCCCAGCT
ACAATCAGGGACAAAATATTTGGCACAAAAGGGAAATTCACCGGGGTGTT
TTGAAACCACAATCGATTTGTAAGTGCTCTAAAGTAGGTTCGAAGGGTAG
AGTTTTAACTCTGAGTTTTAACGCTAGACTTAAGACTTAGGACCTTAGGA
TGTGAGGATCCAAAAGTTCAAAAATGGTCTAGTAGGGCTTGAAATATAGC
CTAGAAACCCATAAATCCCTCCCAGATCGAAATACTTGATCAAATCAAGT
TGAAGGCCTAAAAATTGACATTCTCGCTCGAACTTCAATTTTCGAAAAAA
TTGTAAATTAGCCGAAAGTGCCAATATATTATGACCCTGATTGTAGCACA
CAACGTTCTTTCGACGTTTATCTAACGTTCACAACGTCCGTAAAACGTTG
GATGAACGTGAAAACAAAGTTTTGTGCCAGCTGGGTCTCGCCATTTATGC
CCTTCACGTTTTTCAAATCATTGATGATTTATTTGTTTTCCTTCTCTTTT
TTTTAGGATGCTTACAAATCATCTCAATTGTAA Coding sequence (CDS) from alignment at sc0000250_pilon:249835..255467- >XLOC_044318 ID=XLOC_044318|Name=XLOC_044318|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2976bp|location=Sequence derived from alignment at sc0000250_pilon:249835..255467- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGCAAGACAACAATTGAACAATTTTAAAGATGCCCGCCAATGTCC
TATGGCTGCAAGACAACAATTGAACAATTTTAAAGATGCCCGCCAATGTC
CTTTCCAACTGACCACGGAGACTGGTGCTCCAATGGAAACCAAAACAGCC
ACAATGACCCTTGGCCCAAGAGGTCCAGTCCTCATCCAAGACAACAACTT
TATTGAGGACATGGCACGTTTTGATCGTGAACGTATCCCAGAACGTGTCG
TGCACGCGAAAGGGGCCGGTGCCTTCGGATATTTTGAATGTACTCATGAC
GTGACTAAATACACCAAATTGGCACCGTTCGCTCAAATCGGAAAGAAAAC
TGATGTTTCTGCCCGATTCTCAACTGTTGTTCCAACTGACCACGGAGACT
GGTGCTCCAATGGAAACCAAAACAGCCACAATGACCCTTGGCCCAAGAGG
TCCAGTCCTCATCCAAGACAACAACTTTATTGAGGACATGGCACGTTTTG
ATCGTGAACGTATCCCAGAACGTGTCGTGCACGCGAAAGGGGCCGGTGCC
TTCGGATATTTTGAATGTACTCATGACGTGACTAAATACACCAAATTGGC
ACCGTTCGCTCAAATCGGAAAGAAAACTGATGTTTCTGCCCGATTCTCAA
CTGTTGGTGGTGAATCAGGAAGTGCTGACACTGCTCGTGATCCACGTGGT
TTTGCTGTCAAATTCTACAGTGAAGAAGGAAACTGGGACCTAGTTGGAAA
CAACACGCCCATCTTCTTCATTCGGGATCCAATTCTTTTCCCAAGTTTCA
TTCACACTCAAAAAAGAAACCCAAGAACTCATTTAAAGGTGGTGAATCAG
GAAGTGCTGACACTGCTCGTGATCCACGTGGTTTTGCTGTCAAATTCTAC
AGTGAAGAAGGAAACTGGGACCTAGTTGGAAACAACACGCCCATCTTCTT
CATTCGGGATCCAATTCTTTTCCCAAGTTTCATTCACACTCAAAAAAGAA
ACCCAAGAACTCATTTAAAGGACCCTGACATGTTCTGGGACTTCATCAGT
TTGAGACCAGAAACGACACATCAAGTGATGTTTTTGTTCAGTAACCGTGG
AACACCAGACGGTTATCGTCACATGAATGGATATGGATCTCACACCTTTA
AATTGGTCAATGCTGAGAATGAGTATTGCTGGTGCAAATTCCATTTCAAG
GACCCTGACATGTTCTGGGACTTCATCAGTTTGAGACCAGAAACGACACA
TCAAGTGATGTTTTTGTTCAGTAACCGTGGAACACCAGACGGTTATCGTC
ACATGAATGGATATGGATCTCACACCTTTAAATTGGTCAATGCTGAGAAT
GAGTATTGCTGGTGCAAATTCCATTTCAAGACTGACCAAGGCATTAAGAA
CTTTTCTGCATCTGAAGCTGAAGTTTTGGCTGGAAGAAATCCTGATTACG
CCATCCAAGATCTTTATAATTCCATCGCTAAAGGAGACCATACTGACCAA
GGCATTAAGAACTTTTCTGCATCTGAAGCTGAAGTTTTGGCTGGAAGAAA
TCCTGATTACGCCATCCAAGATCTTTATAATTCCATCGCTAAAGGAGACC
ATCCATCATGGTCATTACAAATTCAAGTGATGAGCAAAGAAGAAGCAGAA
CAAGAAGAAATGAACCCCTTCGATTTGACCAAACCATCATGGTCATTACA
AATTCAAGTGATGAGCAAAGAAGAAGCAGAACAAGAAGAAATGAACCCCT
TCGATTTGACCAAAATTTGGTCACATGAAAAATACCCAATGATTCCAGTC
GGAAGATTGGTGTTGGATCGCAATCCTCGAAATTACTTCCTTGATGTCGA
ACAAAGTGCTTATTCACCAGCTCACATGATTCCTGGTGTAGATTCTTCCC
CTGATAAAATGTTGCAAATTTGGTCACATGAAAAATACCCAATGATTCCA
GTCGGAAGATTGGTGTTGGATCGCAATCCTCGAAATTACTTCCTTGATGT
CGAACAAAGTGCTTATTCACCAGCTCACATGATTCCTGGTGTAGATTCTT
CCCCTGATAAAATGTTGCAAGGACGTTTGTTCTCTTACGGAGACACTCAC
CGTCACCGTCTCGGTGCAAACTACAATCAATTACCTGTCAACAGACCACG
TTGCCCCGTACGCACGTACGCACGTGACGGCCCACAATGCTTTGAACAAG
ACGATGCTCCAAACTATTTCCCAAACAGCTTCAGTGGGCCGCAAGAACAA
AGACAAGAAGCTCATGTCGGAATCAAGGGACGTTTGTTCTCTTACGGAGA
CACTCACCGTCACCGTCTCGGTGCAAACTACAATCAATTACCTGTCAACA
GACCACGTTGCCCCGTACGCACGTACGCACGTGACGGCCCACAATGCTTT
GAACAAGACGATGCTCCAAACTATTTCCCAAACAGCTTCAGTGGGCCGCA
AGAACAAAGACAAGAAGCTCATGTCGGAATCAAGCACGAGGGCATTGAAG
GGCGTTACCAATCCAGTGATGAAGACAACTTCAGTCAACCAGCTATCTTC
TGGTCTAAAGTTCTTGATGAAAAAGAACAGAATGACTTGGTTGCCAATTT
GGCTGGTCACTTGAAGGATGCACAGAAATTTATCCAAGAAAGAGCTCACG
AGGGCATTGAAGGGCGTTACCAATCCAGTGATGAAGACAACTTCAGTCAA
CCAGCTATCTTCTGGTCTAAAGTTCTTGATGAAAAAGAACAGAATGACTT
GGTTGCCAATTTGGCTGGTCACTTGAAGGATGCACAGAAATTTATCCAAG
AAAGAGCTATTGGCAACTTTGCCAAAGTCAATGTTGATTTTGGACAAAAA
CTTCGTGAAGCAGTTATTGGCAACTTTGCCAAAGTCAATGTTGATTTTGG
ACAAAAACTTCGTGAAGCAGTTGATGCTTACAAATCATCTCAATTGTAAG
ATGCTTACAAATCATCTCAATTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000250_pilon | genome | sc0000250_pilon:249835..255467 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1462-1488:28 |
| Aaloc | 1405-1461:812 |
| Aaloc | 1243-1404:1487 |
| Aaloc | 1036-1242:1895 |
| Aaloc | 883-1035:2522 |
| Aaloc | 802-882:2956 |
| Aaloc | 691-801:3690 |
| Aaloc | 511-690:4122 |
| Aaloc | 331-510:4528 |
| Aaloc | 52-327:5137 |
| Aaloc | 1-51:5634 |
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